EWM29421.1, cds1262 (CDS) Nannochloropsis gaditana

Overview
NameEWM29421.1
Unique Namecds1262
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:180740..180848 +
Alignment locationCM002457.1:181069..181580 +

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Properties
Property NameValue
Protein idEWM29421.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100042g31.5668.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:180740..180848 +
CM002457.1supercontigCM002457.1:181069..181580 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29421.1 vs. NCBI_GenBank
Match: gi|585111950|gb|EWM29421.1| (hypothetical protein Naga_100042g31 [Nannochloropsis gaditana])

HSP 1 Score: 409.068 bits (1050), Expect = 2.848e-144
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 
Query:    1 MENFRTTVYSLVKEWSDTQGVDPNVVLMSAGAATLLGLGLMASHACGGSNGSKKRGGHKHKKGKSKKTEGMGGNGAGASKPLPPPRHQAQQPSKAGATKSVQGKAKKQSVPTPASGAPAAAMAAARNGVHPDPGGEVGKNKKKKNKHKKKGALEEGATGGGNSSSQAKEPSMGGRQAQGEAGLANSTFVYNNDRGTVEEVGKGGWR 206
            MENFRTTVYSLVKEWSDTQGVDPNVVLMSAGAATLLGLGLMASHACGGSNGSKKRGGHKHKKGKSKKTEGMGGNGAGASKPLPPPRHQAQQPSKAGATKSVQGKAKKQSVPTPASGAPAAAMAAARNGVHPDPGGEVGKNKKKKNKHKKKGALEEGATGGGNSSSQAKEPSMGGRQAQGEAGLANSTFVYNNDRGTVEEVGKGGWR
Sbjct:    1 MENFRTTVYSLVKEWSDTQGVDPNVVLMSAGAATLLGLGLMASHACGGSNGSKKRGGHKHKKGKSKKTEGMGGNGAGASKPLPPPRHQAQQPSKAGATKSVQGKAKKQSVPTPASGAPAAAMAAARNGVHPDPGGEVGKNKKKKNKHKKKGALEEGATGGGNSSSQAKEPSMGGRQAQGEAGLANSTFVYNNDRGTVEEVGKGGWR 206
The following BLAST results are available for this feature:
BLAST of EWM29421.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111950|gb|EWM29421.1|2.848e-144100.00hypothetical protein Naga_100042g31 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1264rna1264Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications