EWM29397.1, cds1252 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|585111926|gb|EWM29397.1| (prolyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 1415.21 bits (3662), Expect = 0.000e+0 Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0
Query: 1 MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY
Sbjct: 1 MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|551664628|ref|XP_005835077.1| (prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712] >gi|428179225|gb|EKX48097.1| prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712]) HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0 Identity = 329/508 (64.76%), Postives = 399/508 (78.54%), Query Frame = 0
Query: 182 DRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDN-RANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNT-FGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
++ + ITPR +YSQWY DVI AA +VDQSPVKGCMVI+P+GMA+WD L+DEL++RIK G QNAYFPLFIP SFLSKEAEHVEGFAKECAVVTHHRLC DP+G GL+ DP A+LEEPLIVRPTSET+IW+MF KWI+S+RDLPLK+NQWANVVRWE+RTRPFLRS+EFLWQEGHTAHAS+EEA G AR+ LD+Y V +LA+PVVKG KS SERFAGA+ET+TIEALMQNGWALQSGTSHFLGQNFA+AFDV FQ A+ + ELVWATSWGVSTRL+GALVMTHSDD GLVLPP V+PVQVV++P+ G G +E+D V +AL++Q +R VD+ R NM+PG K++EWER+GVP+R+E+GPRD A V R + +P T F I+ +L+ Q+ LL+ A KR+ +T V +Y E+K +L G + GFFL PWKDDAVNE IK + +ATIRC+P N P V +KCFYSG+ ATH+ALFARA+
Sbjct: 1 EKENFVITPRATDYSQWYQDVIQAAQMVDQSPVKGCMVIRPWGMAVWDELKDELNRRIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSG-KGLMADPEAKLEEPLIVRPTSETIIWDMFRKWISSYRDLPLKVNQWANVVRWELRTRPFLRSAEFLWQEGHTAHASKEEADGCAREMLDVYAEVAEGILAIPVVKGTKSPSERFAGADETYTIEALMQNGWALQSGTSHFLGQNFAKAFDVKFQNADQSAELVWATSWGVSTRLLGALVMTHSDDAGLVLPPQVSPVQVVIIPV--GRGKKENDE-----KKVTAALKSQGIRYKVDDSRDNMKPGPKFYEWERRGVPLRVEVGPRDVDANKV---RGEDDGRGDLPFDQTNFAQDIKKQLQDIQTGLLDAARKRLEENTKTVASYDELKTKLENG---ETGFFLVPWKDDAVNEETIKTETKATIRCFPFAHNG-PGAVNGKKCFYSGKDATHMALFARAF 493
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|219110281|ref|XP_002176892.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411427|gb|EEC51355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0 Identity = 369/708 (52.12%), Postives = 453/708 (63.98%), Query Frame = 0
Query: 1 MLPQPLLRGRRL-LFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHAR-------------SRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPI-LKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTG---GAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
++ LL RRL L A +LLF L P++++ P R+Y A A S L RR T+GHA SRLFSSST + ++ E I KGDEIR LK GADK+ + PL+ ELL LKA+ + +PPK + K Q K D+D IT R+ +YS+WY D++ L + SPV+GCMVIKP+GM+LWD +R ELD +I+A+GA+NAYFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL +P G GL+ DP A LE+PLIVRPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+R+ A+ A+ LD Y +C D+LA+PVV+GVKS SERFAGAE+T+TIEALMQNGWALQSGTSHFLGQ+F +AF+V FQ GT++ VW TSWG STRLIGAL+MTHSDD GLVLPP VAP QV++VPI K +E MN + ++L+ + +R VD+R +R GAK+FEWERKGVP+R+EIGPRD V R G K+TIP L++ Q LLE A+ R+ + Y EM+ L + G FL PWK DA NE IKE+C+ATIRCYPLD N Q +KCFYSG ATH+ALF RA+
Sbjct: 4 IIGNSLLVPRRLVLIAMAVSVLLFV--LRPVSSFSF---RPVGRSY---AAAITQSNGL----------RRSTRGHAVGVSISRRDPDAMPSRLFSSSTDS-NKETKASVEEQIKVKGDEIRALKESGADKSTVAPLIDELLALKAKLDPSI---LEPPKKAPKAQTQPKKQQNQSGKRENDDSD---------------FITAREVDYSKWYNDIVRVTGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQAHGAENAYFPLLIPQSFLSKEAEHVDGFAKECAVVTHHRLTTNPDGS-GLMVDPEAALEDPLIVRPTSETMIWYMFRKWIVSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATRDGAIADAQAMLDNYATLCEDLLAMPVVRGVKSPSERFAGAEDTYTIEALMQNGWALQSGTSHFLGQSFGKAFNVTFQDENGTQQDVWGTSWGASTRLIGALIMTHSDDAGLVLPPKVAPAQVIIVPIPPKKDDAETKQAMDIAMNQLTASLKAEGLRFKVDDRDFVRSGAKFFEWERKGVPLRIEIGPRDVRNNVCVFKYRAGENADEKQTIPLSEAAASATAG-LKSMQQDLLEAAKARLTNGITTDTTYEEMRTFLEADEASEYSGKGLFLVPWKCDAENENKIKEECKATIRCYPLDANKQGLH-QGKKCFYSGHDATHMALFGRAF 671
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1210527906|dbj|GAX13437.1| (prolyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0 Identity = 345/622 (55.47%), Postives = 420/622 (67.52%), Query Frame = 0
Query: 71 RTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
RT+ H RL SS+ +SS L E I GD+IR LK GA+K PLV ELL LKAQ DP K+ + ++EEE S IT R +YS+WY D+I A L + SPV+GCMVIKP+GM+LWD +R+ELD +I+ G +NAYFPL IP+SFLSKEAEHV+GFA ECAVVTHHRL DP G GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E+AV AR LD+Y ++C+D+L++PVVKGVKS SERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F AFDV FQ G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V P K G E R A ++ + L+ + +RV VD+R +R GAKYFEWERKGVP+R+EIGPRD V R G ++ + ++++ L+ QS LLE A +R+ + Y EMK L + G FL PWK DA NE IKE+C+ATIRCYPL N + + +KCFYSGE ATH+ALF RA+
Sbjct: 24 RTRPHRWIRLASSTVNDLSSEEKSALEEKIKSTGDQIRALKESGANKDTFAPLVQELLKLKAQL--------DPA-------LAKPTQTKKTQQQKKQHSNEEE----------SDFITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRNELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQRLNAAVDDLVEKLKAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVSWVDAAQMVESGLKEFQSALLERANERLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMH-EGQKCFYSGEEATHMALFGRAF 618
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|545705603|ref|XP_005705121.1| (prolyl-tRNA synthetase [Galdieria sulphuraria] >gi|452821572|gb|EME28601.1| prolyl-tRNA synthetase [Galdieria sulphuraria]) HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0 Identity = 313/508 (61.61%), Postives = 384/508 (75.59%), Query Frame = 0
Query: 181 ADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKE-TIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
+ +S ITPR E+YS WYL VI AA L DQS VKGC+VI+PYG A+W+ LRD LDK IK GAQNAYFPLFIP+SFLSKEAEHVEGFAKECAVVTHHRL ++ L PDP A LEEPLIVRPTSET+IWNMF KWI+S+RDLPL INQWANVVRWE+RTRPFLR++EFLWQEGHTAH + +EA+ A++ L++Y +C ++LA+PV+KG KS SERFAGAEETFTIEA+MQNGWALQSGTSHFLGQNFA+AF V + +LVWATSWG STRL+GAL+MTHSDD GLVLPP VAP+QV+++PI K +ED T + L+ +R +D+R +RPG+KYFEWERKG+P+R+EIGPRD GVVT+A R G K+ +P + IQ +LE Q L ++A++R+ S T+R ++ EMK RL + GFFL PWK +A++E IK + +ATIRCYP D+ V+ KCFYSGEPATH+ALFARAY
Sbjct: 69 SSKSDNKITPRSEDYSAWYLHVIQAAQLADQSAVKGCLVIRPYGYAVWELLRDHLDKLIKETGAQNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLRLN--TNSTLEPDPEAMLEEPLIVRPTSETLIWNMFQKWISSYRDLPLCINQWANVVRWELRTRPFLRTTEFLWQEGHTAHTNAKEAMDKAKEMLNVYTQLCEELLAIPVIKGCKSPSERFAGAEETFTIEAMMQNGWALQSGTSHFLGQNFAKAFQVYYTDTSSQEQLVWATSWGASTRLLGALIMTHSDDIGLVLPPKVAPIQVIIIPIWKSQVDKED--TLRVSQKLLEQLKGAQIRAKLDDRDYIRPGSKYFEWERKGIPLRIEIGPRDVVDGVVTIASRIGNQKKYALPCNESLTMHIQQQLENMQRCLFQQAKERMDSRTFRNVSFDEMKRRLNEKDIQKQGFFLVPWKCNAIHEERIKAETKATIRCYPFDMQ---HLVKNEKCFYSGEPATHMALFARAY 569
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1210530132|dbj|GAX11240.1| (prolyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 342/623 (54.90%), Postives = 416/623 (66.77%), Query Frame = 0
Query: 71 RTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGA-KETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
RT+ R SS+ A L E I GD+IR LK GA K PLV EL +LKAQ DP LA ++ +Q ++ S IT R +YS+WY D+I A L + SPV+GCMVIKP+GM+LWD +R ELD +I+ G +NAYFPL IP+SFLSKEAEHV+GFA ECAVVTHHRL DP G GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E+AV AR LD+Y ++C+D+L++PVVKGVKS SERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F AFDV FQ G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V P K G E + A ++ + LR + +RV VD+R +R GAKYFEWERKGVP+R+EIGPRD V R G K+++P + ++++ L+ QS LLE A R+ + Y EMK L + G FL PWK DA NE IKE+C+ATIRCYPL N + + +KCFYSGE ATH+ALF RA+
Sbjct: 20 RTRHQQWIRFASSTVNESEEKA--ALEERIKATGDQIRALKESGASKDTFAPLVQELQELKAQL--------DP-------------------TLAKPTKKTQQPKKQQSSEEESDFITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQKLDATVDDLVEKLRAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVPLVDA-PEMVESGLKEFQSALLERANARLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMH-KGQKCFYSGEEATHMALFGRAF 610
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1072231889|gb|OEU16621.1| (prolyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0 Identity = 333/620 (53.71%), Postives = 418/620 (67.42%), Query Frame = 0
Query: 74 GHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDD-RTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARR--TGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
G++ S S ST ++S + L I GD+IR LK GADKA + P+V ELL LK Q DP K + +N + + + + + D S IT R +YS+WY D+I A L + SPV+GCMVIKP+GM+LWD +R +LD+RIK NGA+N YFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E A+ AR ++ Y +C +++A+PVV+GVKS SERFAGA +TFTIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ +G + VW TSWGVSTRLIGAL+MTHSDD GLVLPP VAP+Q+V+VPI EE ++ + + L+ + +RV VD+R MR GAKYFEWERKGVP+R+E+GPRD + R +G ++T N + LE+ Q LLEEA R+++ +Y EM++ L G +L PWK DA NE IK +C+ATIRCYPLD N++ + +KCFYSGE ATH+ALF RAY
Sbjct: 8 GYSVSYALSCSTEQLSEEQKDVLETKIKETGDKIRVLKEEGADKATIAPIVQELLALKTQL--------DPTFNKAKKPKQQQNQKQSQKQNQKNQQKLKGNNNNKEDDSESDFITARAVDYSKWYSDIIRVAGLAETSPVRGCMVIKPWGMSLWDKIRTDLDERIKENGAENCYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLKSADNKDDGLIVDPEAELEDPLIIRPTSETMIWYMFRKWINSHRDLPLKVNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATSEGALDDARTMMEEYATLCENLMAMPVVRGVKSPSERFAGAVDTFTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDTDGEEKDVWGTSWGVSTRLIGALIMTHSDDNGLVLPPRVAPIQIVIVPIPPKKNDEEGKIAMDKALDELVAGLKAKGMRVKVDDRDFMRNGAKYFEWERKGVPLRIELGPRDVKSNSCVFKYRAGSGSDEKTSIDLNDAVQKASDGLESMQEGLLEEARSRLSNGITEDASYEEMRDALDNDEASSYAGPGLYLVPWKCDAENEDKIKTECKATIRCYPLDSNSEGLH-EGKKCFYSGEDATHMALFGRAY 618
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|397614943|gb|EJK63110.1| (hypothetical protein THAOC_16250 [Thalassiosira oceanica]) HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0 Identity = 345/625 (55.20%), Postives = 429/625 (68.64%), Query Frame = 0
Query: 79 RLFSSSTPRVSSPALET-----------LREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDD-RTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGG-AKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
R SST R+ S E+ L I KGD IR +K G K L P ++ELLDLKAQ + A P + AK +Q+ D+ E S ITPR ENYS+WY D+I +L + SPV+GCMVIKP+GM+LWD +R++LD RIK +GA+NAYFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL DP+G GL+ DP A+LE+PLI+RPTSETMIWNMF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E A+ ++D LD Y ++C +LA+PVVKG KS SERFAGAEET+TIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ ++G++++VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVVVVPI EE ++ + + L+ ++V VD+R +R GAKYFEWERKGVP+R+E+GPRD GV R G KETI L++ Q +LL+ A++R+A + + Y EMK+ L + G +L PWK DA NE IK++C+ATIRCYP D+N + + +KCFYSGE ATH+ALF RA+
Sbjct: 53 RCHRSSTARLMSTTAESRADLSEEQKTELEGKIKDKGDAIRRMKDEGISKEDLAPHITELLDLKAQLDPSAAAP-----------KPAKKNKQQQKSKKKQQTDDVE----------SDYITPRAENYSKWYNDIIRVCELAETSPVRGCMVIKPWGMSLWDQVRNDLDARIKDHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTADPSGEGGLIADPEAELEDPLIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEGAIKDSKDMLDQYADMCEKLLAIPVVKGAKSPSERFAGAEETYTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDSDGSQQMVWGTSWGVSTRLLGALIMTHSDDAGLVLPPRVAPVQVVVVPIPAKKNDEEGKAELENALDKLVADLKGSGLKVKVDDRDYVRNGAKYFEWERKGVPLRVELGPRDVKGGVCVFKYRVGSEGKETISLDEVAAKATAG-LDSVQEFLLDSAKERLAGNLNLMATYDEMKDALEKDEASEYDGPGLYLVPWKCDAANEEKIKDECKATIRCYPTDVN-EAGMHEGKKCFYSGEDATHMALFGRAF 654
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|676378593|ref|XP_009032575.1| (hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens] >gi|323457093|gb|EGB12959.1| hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens]) HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0 Identity = 335/514 (65.18%), Postives = 390/514 (75.88%), Query Frame = 0
Query: 176 VMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEH--VEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
V K A +S +IT E++S WY DVI ADLVD SPVKGCMVIKP+GMA+WD LRDELD RIKA+GA+NAYFPL IPRSFL+KEAEH VEGFAKECAVVTHHRL D GG L PDP+A+L+EPLI+RPTSETMIW+MFGKWI SHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHA+R+EA+ A + LD+Y V LA+PVV+G KSA ERFAGA+ET+TIEALM NGWALQSGTSHFLGQNFARAFDV FQ + RELVWATSWGVSTRL+GALVMTHSDD GLVLPP VAPVQV VVPI + + A ++ + + + VRV VD R NMRPGAK+FEWERKGVP+R+E+GPRDAA GVV +A R GG K ++ A + + + LE Q+ L A R+ T V +Y E+K ++ +D+GFF W D NE AIKEDC ATIRCYPLD D + + CFYSG+PATH+ALFARA+
Sbjct: 102 VDKGAATTASDSITSASEDFSAWYADVIRGADLVDASPVKGCMVIKPWGMAVWDRLRDELDGRIKASGAENAYFPLLIPRSFLAKEAEHCHVEGFAKECAVVTHHRLAADGKGG--LEPDPAAELDEPLIIRPTSETMIWHMFGKWINSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHATRDEALATAEEMLDVYAEVVEHFLAVPVVRGAKSAIERFAGADETYTIEALMPNGWALQSGTSHFLGQNFARAFDVQFQNKDAKRELVWATSWGVSTRLLGALVMTHSDDAGLVLPPRVAPVQVAVVPITRKNDDAGTEAVDALVDGLVAECKALGVRVKVDERPNMRPGAKFFEWERKGVPLRVEVGPRDAAEGVVVVASRLGGEKRSVAAADAAADLAAS-LEDIQARLFAAAAARLDGGTVDVGSYDELKAKIDA---DDLGFFRVYWAADDANEKAIKEDCSATIRCYPLDAQRD---LAGKACFYSGKPATHVALFARAF 606
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|544212241|ref|XP_005534840.1| (proline--tRNA ligase [Cyanidioschyzon merolae strain 10D] >gi|449016831|dbj|BAM80233.1| proline--tRNA ligase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 310/516 (60.08%), Postives = 378/516 (73.26%), Query Frame = 0
Query: 187 AITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPG-LVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAE-GTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERL-------AGGGRED------IGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
+ITPR +Y+QWYLDVIAAA L D SPVKG +V +P+G A+W+ +R+ELD+RI+ GAQN FPL IP+SFL +EAEHV+GFAKECAVVTHHRL P G PG L PDP A+LEEPL+VRPTSET++W+MFG+WI S+RDLPL +NQW NVVRWE+RTRPFLR+ EF WQEGHTAHA+ EA AR+ L +Y + LA+PV+ G KS+SERFAGAEETFT+EA+MQNGWALQSGTSHFLGQNFARAFDV++Q+A+ G RELVWATSWG+STR+IGAL+MTHSDD GLVLPP VAPVQVV+VPI + + E + AL VRVHVD R ++RPGAKYFEWER+GVP+R+E+G RD A + L R +KE + N + + L+A Q L A+ + HT RV++Y EMK L A G E GFFL PW DDA NEA IK+DC+ TIRCYPLD D + +KCFYSG PATH+A+FAR+Y
Sbjct: 86 SITPRAVSYAQWYLDVIAAAQLADSSPVKGSLVFRPHGWAIWELIREELDRRIRQTGAQNVSFPLLIPQSFLCREAEHVQGFAKECAVVTHHRLRAAPDGAPGALEPDPQARLEEPLVVRPTSETIVWHMFGRWIQSYRDLPLMVNQWCNVVRWELRTRPFLRTLEFFWQEGHTAHATSAEAEAKAREMLTVYQKFLEEWLAIPVIVGTKSSSERFAGAEETFTLEAIMQNGWALQSGTSHFLGQNFARAFDVEYQSADSGVRELVWATSWGLSTRVIGALIMTHSDDHGLVLPPRVAPVQVVIVPI-QSKDATEQSLVRQRCQEMQDALERAGVRVHVDARDHIRPGAKYFEWERRGVPLRIEVGMRDLQAEQIVLVDRCLRSKEKLAFDNHWTKSVIARLDAFQERLFNNAKGFLREHTRRVESYDEMKRFLTPSNQDAAAYGNESNDEQHITGFFLVPWHDDATNEAIIKQDCKMTIRCYPLD---SQDEARGKKCFYSGRPATHMAIFARSY 597 The following BLAST results are available for this feature:
BLAST of EWM29397.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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