EWM29397.1, cds1252 (CDS) Nannochloropsis gaditana

Overview
NameEWM29397.1
Unique Namecds1252
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:154179..156242 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29397.1
Productprolyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100042g42.5644.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:154179..156242 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006433prolyl-tRNA aminoacylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0004827proline-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR017449Pro-tRNA_synth_II
IPR006195aa-tRNA-synth_II
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR004499Pro-tRNA-ligase_IIa_arc-type
IPR009068S15_NS1_RNA-bd
IPR004154Anticodon-bd
IPR000738WHEP-TRS
IPR016061Pro-tRNA_ligase_II_C
Homology
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|585111926|gb|EWM29397.1| (prolyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1415.21 bits (3662), Expect = 0.000e+0
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0
Query:    1 MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY
Sbjct:    1 MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|551664628|ref|XP_005835077.1| (prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712] >gi|428179225|gb|EKX48097.1| prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712])

HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0
Identity = 329/508 (64.76%), Postives = 399/508 (78.54%), Query Frame = 0
Query:  182 DRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDN-RANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNT-FGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            ++ +  ITPR  +YSQWY DVI AA +VDQSPVKGCMVI+P+GMA+WD L+DEL++RIK  G QNAYFPLFIP SFLSKEAEHVEGFAKECAVVTHHRLC DP+G  GL+ DP A+LEEPLIVRPTSET+IW+MF KWI+S+RDLPLK+NQWANVVRWE+RTRPFLRS+EFLWQEGHTAHAS+EEA G AR+ LD+Y  V   +LA+PVVKG KS SERFAGA+ET+TIEALMQNGWALQSGTSHFLGQNFA+AFDV FQ A+ + ELVWATSWGVSTRL+GALVMTHSDD GLVLPP V+PVQVV++P+  G G +E+D        V +AL++Q +R  VD+ R NM+PG K++EWER+GVP+R+E+GPRD  A  V   R     +  +P   T F   I+ +L+  Q+ LL+ A KR+  +T  V +Y E+K +L  G   + GFFL PWKDDAVNE  IK + +ATIRC+P   N  P  V  +KCFYSG+ ATH+ALFARA+
Sbjct:    1 EKENFVITPRATDYSQWYQDVIQAAQMVDQSPVKGCMVIRPWGMAVWDELKDELNRRIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSG-KGLMADPEAKLEEPLIVRPTSETIIWDMFRKWISSYRDLPLKVNQWANVVRWELRTRPFLRSAEFLWQEGHTAHASKEEADGCAREMLDVYAEVAEGILAIPVVKGTKSPSERFAGADETYTIEALMQNGWALQSGTSHFLGQNFAKAFDVKFQNADQSAELVWATSWGVSTRLLGALVMTHSDDAGLVLPPQVSPVQVVIIPV--GRGKKENDE-----KKVTAALKSQGIRYKVDDSRDNMKPGPKFYEWERRGVPLRVEVGPRDVDANKV---RGEDDGRGDLPFDQTNFAQDIKKQLQDIQTGLLDAARKRLEENTKTVASYDELKTKLENG---ETGFFLVPWKDDAVNEETIKTETKATIRCFPFAHNG-PGAVNGKKCFYSGKDATHMALFARAF 493          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|219110281|ref|XP_002176892.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411427|gb|EEC51355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 369/708 (52.12%), Postives = 453/708 (63.98%), Query Frame = 0
Query:    1 MLPQPLLRGRRL-LFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHAR-------------SRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPI-LKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTG---GAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            ++   LL  RRL L   A  +LLF   L P++++      P  R+Y   A A   S  L          RR T+GHA              SRLFSSST   +     ++ E I  KGDEIR LK  GADK+ + PL+ ELL LKA+ +       +PPK     +   K    Q  K    D+D                IT R+ +YS+WY D++    L + SPV+GCMVIKP+GM+LWD +R ELD +I+A+GA+NAYFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL  +P G  GL+ DP A LE+PLIVRPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+R+ A+  A+  LD Y  +C D+LA+PVV+GVKS SERFAGAE+T+TIEALMQNGWALQSGTSHFLGQ+F +AF+V FQ   GT++ VW TSWG STRLIGAL+MTHSDD GLVLPP VAP QV++VPI  K   +E        MN + ++L+ + +R  VD+R  +R GAK+FEWERKGVP+R+EIGPRD    V     R G     K+TIP            L++ Q  LLE A+ R+ +       Y EM+  L      +    G FL PWK DA NE  IKE+C+ATIRCYPLD N      Q +KCFYSG  ATH+ALF RA+
Sbjct:    4 IIGNSLLVPRRLVLIAMAVSVLLFV--LRPVSSFSF---RPVGRSY---AAAITQSNGL----------RRSTRGHAVGVSISRRDPDAMPSRLFSSSTDS-NKETKASVEEQIKVKGDEIRALKESGADKSTVAPLIDELLALKAKLDPSI---LEPPKKAPKAQTQPKKQQNQSGKRENDDSD---------------FITAREVDYSKWYNDIVRVTGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQAHGAENAYFPLLIPQSFLSKEAEHVDGFAKECAVVTHHRLTTNPDGS-GLMVDPEAALEDPLIVRPTSETMIWYMFRKWIVSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATRDGAIADAQAMLDNYATLCEDLLAMPVVRGVKSPSERFAGAEDTYTIEALMQNGWALQSGTSHFLGQSFGKAFNVTFQDENGTQQDVWGTSWGASTRLIGALIMTHSDDAGLVLPPKVAPAQVIIVPIPPKKDDAETKQAMDIAMNQLTASLKAEGLRFKVDDRDFVRSGAKFFEWERKGVPLRIEIGPRDVRNNVCVFKYRAGENADEKQTIPLSEAAASATAG-LKSMQQDLLEAAKARLTNGITTDTTYEEMRTFLEADEASEYSGKGLFLVPWKCDAENENKIKEECKATIRCYPLDANKQGLH-QGKKCFYSGHDATHMALFGRAF 671          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1210527906|dbj|GAX13437.1| (prolyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 345/622 (55.47%), Postives = 420/622 (67.52%), Query Frame = 0
Query:   71 RTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            RT+ H   RL SS+   +SS     L E I   GD+IR LK  GA+K    PLV ELL LKAQ         DP               K+  +     ++EEE          S  IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R+ELD +I+  G +NAYFPL IP+SFLSKEAEHV+GFA ECAVVTHHRL  DP G  GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E+AV  AR  LD+Y ++C+D+L++PVVKGVKS SERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F  AFDV FQ   G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V  P  K  G E   R  A ++ +   L+ + +RV VD+R  +R GAKYFEWERKGVP+R+EIGPRD    V     R G  ++   +      ++++ L+  QS LLE A +R+     +   Y EMK  L      +    G FL PWK DA NE  IKE+C+ATIRCYPL  N +    + +KCFYSGE ATH+ALF RA+
Sbjct:   24 RTRPHRWIRLASSTVNDLSSEEKSALEEKIKSTGDQIRALKESGANKDTFAPLVQELLKLKAQL--------DPA-------LAKPTQTKKTQQQKKQHSNEEE----------SDFITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRNELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQRLNAAVDDLVEKLKAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVSWVDAAQMVESGLKEFQSALLERANERLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMH-EGQKCFYSGEEATHMALFGRAF 618          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|545705603|ref|XP_005705121.1| (prolyl-tRNA synthetase [Galdieria sulphuraria] >gi|452821572|gb|EME28601.1| prolyl-tRNA synthetase [Galdieria sulphuraria])

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 313/508 (61.61%), Postives = 384/508 (75.59%), Query Frame = 0
Query:  181 ADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKE-TIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            + +S   ITPR E+YS WYL VI AA L DQS VKGC+VI+PYG A+W+ LRD LDK IK  GAQNAYFPLFIP+SFLSKEAEHVEGFAKECAVVTHHRL ++      L PDP A LEEPLIVRPTSET+IWNMF KWI+S+RDLPL INQWANVVRWE+RTRPFLR++EFLWQEGHTAH + +EA+  A++ L++Y  +C ++LA+PV+KG KS SERFAGAEETFTIEA+MQNGWALQSGTSHFLGQNFA+AF V +       +LVWATSWG STRL+GAL+MTHSDD GLVLPP VAP+QV+++PI K    +ED  T      +   L+   +R  +D+R  +RPG+KYFEWERKG+P+R+EIGPRD   GVVT+A R G  K+  +P   +    IQ +LE  Q  L ++A++R+ S T+R  ++ EMK RL     +  GFFL PWK +A++E  IK + +ATIRCYP D+      V+  KCFYSGEPATH+ALFARAY
Sbjct:   69 SSKSDNKITPRSEDYSAWYLHVIQAAQLADQSAVKGCLVIRPYGYAVWELLRDHLDKLIKETGAQNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLRLN--TNSTLEPDPEAMLEEPLIVRPTSETLIWNMFQKWISSYRDLPLCINQWANVVRWELRTRPFLRTTEFLWQEGHTAHTNAKEAMDKAKEMLNVYTQLCEELLAIPVIKGCKSPSERFAGAEETFTIEAMMQNGWALQSGTSHFLGQNFAKAFQVYYTDTSSQEQLVWATSWGASTRLLGALIMTHSDDIGLVLPPKVAPIQVIIIPIWKSQVDKED--TLRVSQKLLEQLKGAQIRAKLDDRDYIRPGSKYFEWERKGIPLRIEIGPRDVVDGVVTIASRIGNQKKYALPCNESLTMHIQQQLENMQRCLFQQAKERMDSRTFRNVSFDEMKRRLNEKDIQKQGFFLVPWKCNAIHEERIKAETKATIRCYPFDMQ---HLVKNEKCFYSGEPATHMALFARAY 569          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1210530132|dbj|GAX11240.1| (prolyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 342/623 (54.90%), Postives = 416/623 (66.77%), Query Frame = 0
Query:   71 RTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGA-KETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            RT+     R  SS+       A   L E I   GD+IR LK  GA K    PLV EL +LKAQ         DP                    LA      ++   +Q ++  S  IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R ELD +I+  G +NAYFPL IP+SFLSKEAEHV+GFA ECAVVTHHRL  DP G  GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E+AV  AR  LD+Y ++C+D+L++PVVKGVKS SERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F  AFDV FQ   G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V  P  K  G E   +  A ++ +   LR + +RV VD+R  +R GAKYFEWERKGVP+R+EIGPRD    V     R G   K+++P  +    ++++ L+  QS LLE A  R+     +   Y EMK  L      +    G FL PWK DA NE  IKE+C+ATIRCYPL  N +    + +KCFYSGE ATH+ALF RA+
Sbjct:   20 RTRHQQWIRFASSTVNESEEKA--ALEERIKATGDQIRALKESGASKDTFAPLVQELQELKAQL--------DP-------------------TLAKPTKKTQQPKKQQSSEEESDFITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQKLDATVDDLVEKLRAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVPLVDA-PEMVESGLKEFQSALLERANARLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMH-KGQKCFYSGEEATHMALFGRAF 610          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|1072231889|gb|OEU16621.1| (prolyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0
Identity = 333/620 (53.71%), Postives = 418/620 (67.42%), Query Frame = 0
Query:   74 GHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDD-RTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARR--TGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            G++ S   S ST ++S    + L   I   GD+IR LK  GADKA + P+V ELL LK Q         DP      K +  +N  + + +        +     +  D  S  IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R +LD+RIK NGA+N YFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL        GL+ DP A+LE+PLI+RPTSETMIW MF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E A+  AR  ++ Y  +C +++A+PVV+GVKS SERFAGA +TFTIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ  +G  + VW TSWGVSTRLIGAL+MTHSDD GLVLPP VAP+Q+V+VPI      EE        ++ + + L+ + +RV VD+R  MR GAKYFEWERKGVP+R+E+GPRD  +       R  +G  ++T    N       + LE+ Q  LLEEA  R+++      +Y EM++ L           G +L PWK DA NE  IK +C+ATIRCYPLD N++    + +KCFYSGE ATH+ALF RAY
Sbjct:    8 GYSVSYALSCSTEQLSEEQKDVLETKIKETGDKIRVLKEEGADKATIAPIVQELLALKTQL--------DPTFNKAKKPKQQQNQKQSQKQNQKNQQKLKGNNNNKEDDSESDFITARAVDYSKWYSDIIRVAGLAETSPVRGCMVIKPWGMSLWDKIRTDLDERIKENGAENCYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLKSADNKDDGLIVDPEAELEDPLIIRPTSETMIWYMFRKWINSHRDLPLKVNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATSEGALDDARTMMEEYATLCENLMAMPVVRGVKSPSERFAGAVDTFTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDTDGEEKDVWGTSWGVSTRLIGALIMTHSDDNGLVLPPRVAPIQIVIVPIPPKKNDEEGKIAMDKALDELVAGLKAKGMRVKVDDRDFMRNGAKYFEWERKGVPLRIELGPRDVKSNSCVFKYRAGSGSDEKTSIDLNDAVQKASDGLESMQEGLLEEARSRLSNGITEDASYEEMRDALDNDEASSYAGPGLYLVPWKCDAENEDKIKTECKATIRCYPLDSNSEGLH-EGKKCFYSGEDATHMALFGRAY 618          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|397614943|gb|EJK63110.1| (hypothetical protein THAOC_16250 [Thalassiosira oceanica])

HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0
Identity = 345/625 (55.20%), Postives = 429/625 (68.64%), Query Frame = 0
Query:   79 RLFSSSTPRVSSPALET-----------LREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYDPPKGGGGKKQGAKNGGKQKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDD-RTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGG-AKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDI---GFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            R   SST R+ S   E+           L   I  KGD IR +K  G  K  L P ++ELLDLKAQ +  A  P           + AK   +Q+        D+ E          S  ITPR ENYS+WY D+I   +L + SPV+GCMVIKP+GM+LWD +R++LD RIK +GA+NAYFPL IP+SFLSKEAEHV+GFAKECAVVTHHRL  DP+G  GL+ DP A+LE+PLI+RPTSETMIWNMF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR+SEFLWQEGHTAHA+ E A+  ++D LD Y ++C  +LA+PVVKG KS SERFAGAEET+TIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ ++G++++VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVVVVPI      EE        ++ + + L+   ++V VD+R  +R GAKYFEWERKGVP+R+E+GPRD   GV     R G   KETI             L++ Q +LL+ A++R+A +   +  Y EMK+ L      +    G +L PWK DA NE  IK++C+ATIRCYP D+N +    + +KCFYSGE ATH+ALF RA+
Sbjct:   53 RCHRSSTARLMSTTAESRADLSEEQKTELEGKIKDKGDAIRRMKDEGISKEDLAPHITELLDLKAQLDPSAAAP-----------KPAKKNKQQQKSKKKQQTDDVE----------SDYITPRAENYSKWYNDIIRVCELAETSPVRGCMVIKPWGMSLWDQVRNDLDARIKDHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTADPSGEGGLIADPEAELEDPLIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEGAIKDSKDMLDQYADMCEKLLAIPVVKGAKSPSERFAGAEETYTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDSDGSQQMVWGTSWGVSTRLLGALIMTHSDDAGLVLPPRVAPVQVVVVPIPAKKNDEEGKAELENALDKLVADLKGSGLKVKVDDRDYVRNGAKYFEWERKGVPLRVELGPRDVKGGVCVFKYRVGSEGKETISLDEVAAKATAG-LDSVQEFLLDSAKERLAGNLNLMATYDEMKDALEKDEASEYDGPGLYLVPWKCDAANEEKIKDECKATIRCYPTDVN-EAGMHEGKKCFYSGEDATHMALFGRAF 654          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|676378593|ref|XP_009032575.1| (hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens] >gi|323457093|gb|EGB12959.1| hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens])

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 335/514 (65.18%), Postives = 390/514 (75.88%), Query Frame = 0
Query:  176 VMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEH--VEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            V K  A  +S +IT   E++S WY DVI  ADLVD SPVKGCMVIKP+GMA+WD LRDELD RIKA+GA+NAYFPL IPRSFL+KEAEH  VEGFAKECAVVTHHRL  D  GG  L PDP+A+L+EPLI+RPTSETMIW+MFGKWI SHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHA+R+EA+  A + LD+Y  V    LA+PVV+G KSA ERFAGA+ET+TIEALM NGWALQSGTSHFLGQNFARAFDV FQ  +  RELVWATSWGVSTRL+GALVMTHSDD GLVLPP VAPVQV VVPI +       +   A ++ + +  +   VRV VD R NMRPGAK+FEWERKGVP+R+E+GPRDAA GVV +A R GG K ++ A +    +  + LE  Q+ L   A  R+   T  V +Y E+K ++     +D+GFF   W  D  NE AIKEDC ATIRCYPLD   D   +  + CFYSG+PATH+ALFARA+
Sbjct:  102 VDKGAATTASDSITSASEDFSAWYADVIRGADLVDASPVKGCMVIKPWGMAVWDRLRDELDGRIKASGAENAYFPLLIPRSFLAKEAEHCHVEGFAKECAVVTHHRLAADGKGG--LEPDPAAELDEPLIIRPTSETMIWHMFGKWINSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHATRDEALATAEEMLDVYAEVVEHFLAVPVVRGAKSAIERFAGADETYTIEALMPNGWALQSGTSHFLGQNFARAFDVQFQNKDAKRELVWATSWGVSTRLLGALVMTHSDDAGLVLPPRVAPVQVAVVPITRKNDDAGTEAVDALVDGLVAECKALGVRVKVDERPNMRPGAKFFEWERKGVPLRVEVGPRDAAEGVVVVASRLGGEKRSVAAADAAADLAAS-LEDIQARLFAAAAARLDGGTVDVGSYDELKAKIDA---DDLGFFRVYWAADDANEKAIKEDCSATIRCYPLDAQRD---LAGKACFYSGKPATHVALFARAF 606          
BLAST of EWM29397.1 vs. NCBI_GenBank
Match: gi|544212241|ref|XP_005534840.1| (proline--tRNA ligase [Cyanidioschyzon merolae strain 10D] >gi|449016831|dbj|BAM80233.1| proline--tRNA ligase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0
Identity = 310/516 (60.08%), Postives = 378/516 (73.26%), Query Frame = 0
Query:  187 AITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPG-LVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAE-GTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERL-------AGGGRED------IGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPDRVQARKCFYSGEPATHIALFARAY 687
            +ITPR  +Y+QWYLDVIAAA L D SPVKG +V +P+G A+W+ +R+ELD+RI+  GAQN  FPL IP+SFL +EAEHV+GFAKECAVVTHHRL   P G PG L PDP A+LEEPL+VRPTSET++W+MFG+WI S+RDLPL +NQW NVVRWE+RTRPFLR+ EF WQEGHTAHA+  EA   AR+ L +Y     + LA+PV+ G KS+SERFAGAEETFT+EA+MQNGWALQSGTSHFLGQNFARAFDV++Q+A+ G RELVWATSWG+STR+IGAL+MTHSDD GLVLPP VAPVQVV+VPI +   + E          +  AL    VRVHVD R ++RPGAKYFEWER+GVP+R+E+G RD  A  + L  R   +KE +   N +   +   L+A Q  L   A+  +  HT RV++Y EMK  L       A  G E        GFFL PW DDA NEA IK+DC+ TIRCYPLD     D  + +KCFYSG PATH+A+FAR+Y
Sbjct:   86 SITPRAVSYAQWYLDVIAAAQLADSSPVKGSLVFRPHGWAIWELIREELDRRIRQTGAQNVSFPLLIPQSFLCREAEHVQGFAKECAVVTHHRLRAAPDGAPGALEPDPQARLEEPLVVRPTSETIVWHMFGRWIQSYRDLPLMVNQWCNVVRWELRTRPFLRTLEFFWQEGHTAHATSAEAEAKAREMLTVYQKFLEEWLAIPVIVGTKSSSERFAGAEETFTLEAIMQNGWALQSGTSHFLGQNFARAFDVEYQSADSGVRELVWATSWGLSTRVIGALIMTHSDDHGLVLPPRVAPVQVVIVPI-QSKDATEQSLVRQRCQEMQDALERAGVRVHVDARDHIRPGAKYFEWERRGVPLRIEVGMRDLQAEQIVLVDRCLRSKEKLAFDNHWTKSVIARLDAFQERLFNNAKGFLREHTRRVESYDEMKRFLTPSNQDAAAYGNESNDEQHITGFFLVPWHDDATNEAIIKQDCKMTIRCYPLD---SQDEARGKKCFYSGRPATHMAIFARSY 597          
The following BLAST results are available for this feature:
BLAST of EWM29397.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111926|gb|EWM29397.1|0.000e+0100.00prolyl-trna synthetase [Nannochloropsis gaditana][more]
gi|551664628|ref|XP_005835077.1|0.000e+064.76prolyl-tRNA synthetase, partial [Guillardia theta ... [more]
gi|219110281|ref|XP_002176892.1|0.000e+052.12predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210527906|dbj|GAX13437.1|0.000e+055.47prolyl-tRNA synthetase [Fistulifera solaris][more]
gi|545705603|ref|XP_005705121.1|0.000e+061.61prolyl-tRNA synthetase [Galdieria sulphuraria] >gi... [more]
gi|1210530132|dbj|GAX11240.1|0.000e+054.90prolyl-tRNA synthetase [Fistulifera solaris][more]
gi|1072231889|gb|OEU16621.1|0.000e+053.71prolyl-tRNA synthetase [Fragilariopsis cylindrus C... [more]
gi|397614943|gb|EJK63110.1|0.000e+055.20hypothetical protein THAOC_16250 [Thalassiosira oc... [more]
gi|676378593|ref|XP_009032575.1|0.000e+065.18hypothetical protein AURANDRAFT_18779 [Aureococcus... [more]
gi|544212241|ref|XP_005534840.1|0.000e+060.08proline--tRNA ligase [Cyanidioschyzon merolae stra... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1254rna1254Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications