EWM29420.1, cds1250 (CDS) Nannochloropsis gaditana

Overview
NameEWM29420.1
Unique Namecds1250
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:147217..147903 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29420.1
Productcalcium calmodulin-dependent protein variant variant
Orig transcript idgnl|cribi|Naga_100042g46.5667.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:147217..147903 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR020636Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|585111949|gb|EWM29420.1| (calcium calmodulin-dependent protein variant variant [Nannochloropsis gaditana])

HSP 1 Score: 454.136 bits (1167), Expect = 2.332e-161
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA 228
            MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA
Sbjct:    1 MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA 228          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|669156874|ref|XP_008613999.1| (CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20] >gi|530734256|gb|EQC32498.1| CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 156.377 bits (394), Expect = 2.421e-40
Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+   QP+GKP DLW+VG++ Y ML G  PF PP+ C+++PV FQ RAW+  S +A  F+  LL  D  KR TA +AL H W  T
Sbjct:  632 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGLTGSVGYMAPELFESQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSACMNEPVEFQPRAWKKFSPEAMDFVVHLLERDPTKRFTAEQALTHPWFDT 759          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|813120673|ref|XP_012196424.1| (CAMK/CAMK1 protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641538939|gb|KDO32760.1| CAMK/CAMK1 protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 156.377 bits (394), Expect = 2.445e-40
Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+   QP+GKP DLW+VG++ Y ML G  PF PP+ C+++PV FQ RAW+  S +A  F+  LL  D  KR TA +AL H W  T
Sbjct:  632 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGLTGSVGYMAPELFESQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSACMNEPVEFQPRAWKKFSPEAMDFVVHLLERDPTKRFTAEQALTHPWFDT 759          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|1173951421|gb|OQR99307.1| (kinase [Thraustotheca clavata])

HSP 1 Score: 155.221 bits (391), Expect = 6.135e-40
Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+   QP+GKP DLW+VG++ Y ML G  PF PP+ C+ +PV+FQ R W+  S +AQ F+  LL  D  KR TA +AL H W  T
Sbjct:  616 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGMTGSVGYMAPELFDSQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSSCITEPVQFQPRLWKKFSPEAQDFVTHLLERDPTKRFTAEQALTHPWFDT 743          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|695387665|ref|XP_009518955.1| (protein kinase [Phytophthora sojae] >gi|348683852|gb|EGZ23667.1| protein kinase [Phytophthora sojae])

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-40
Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = 0
Query:   58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            ++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G  PF PP  C+++   F  R W  IS DA+  + RLL  D  KR TA EAL H W ++
Sbjct:  521 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWTTISADAKDLVQRLLERDPTKRLTAAEALAHSWFES 645          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|1173951080|gb|OQR98993.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 155.221 bits (391), Expect = 7.363e-40
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+   QP+GKP DLW+VG+I Y ML G  PF PP+ C ++PV FQ R W+  S +AQ F+  LL  D  KR TA +AL H W  T
Sbjct:  617 LQVELCDFGLSVKVPDVRFFKHTGDVHKVPFTGMTGSVGYMAPELFDSQPYGKPIDLWSVGIIVYEMLTGFQPFYPPSACTNEPVEFQPRMWKKFSPEAQDFVTHLLERDPTKRFTAEQALTHPWFDT 744          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|325180867|emb|CCA15277.1| (protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 152.91 bits (385), Expect = 2.731e-39
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPD RFFK TGD+++VPF+++ GT G+I PE++++QP+GKP D+W++G+I Y ML G  PF PP  C+++ V F    W  IS  A+H +  LL  D  KR TA +AL H W  T
Sbjct:  515 LQVELCDFGLSIKVPDARFFKLTGDVHKVPFTQVTGTPGYIAPELLQRQPYGKPVDMWSIGIIIYEMLTGYRPFYPPRACMEEDVDFGDTTWHKISPQAKHLVQHLLDRDPMKRFTAEQALSHEWFDT 642          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|635364602|emb|CCI46977.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 152.91 bits (385), Expect = 2.854e-39
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 0
Query:   55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            L  ++CDFGLS KVPD RFFK TGD+++VPF+++ GT G+I PE++++QP+GKP D+W++G+I Y ML G  PF PP  C+++ V F    W  IS  A+H +  LL  D  KR TA +AL H W  T
Sbjct:  533 LQVELCDFGLSIKVPDARFFKLTGDVHKVPFTQVTGTPGYIAPELLQRQPYGKPVDMWSIGIIIYEMLTGYRPFYPPRACVEEDVDFGDATWHKISPQAKHLVQHLLERDPTKRFTAEQALSHEWFDT 660          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|301114887|ref|XP_002999213.1| (protein kinase, putative [Phytophthora infestans T30-4] >gi|262111307|gb|EEY69359.1| protein kinase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 150.599 bits (379), Expect = 2.490e-38
Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 0
Query:   58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            ++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G  PF PP  C+++   F  R W+ IS DA+  + RLL  D  KR TA EAL H W ++
Sbjct:  564 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWKTISADAKDLVQRLLQRDPTKRLTAAEALAHTWFES 688          
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|570988903|gb|ETP47198.1| (CAMK protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 150.599 bits (379), Expect = 2.699e-38
Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 0
Query:   58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
            ++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G  PF PP  C+++   F  R W+ IS DA+  + RLL  D  KR TA EAL H W ++
Sbjct:  566 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACINEDADFSDRVWKTISADAKDLVERLLERDPAKRLTAAEALAHSWFES 690          
The following BLAST results are available for this feature:
BLAST of EWM29420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111949|gb|EWM29420.1|2.332e-161100.00calcium calmodulin-dependent protein variant varia... [more]
gi|669156874|ref|XP_008613999.1|2.421e-4052.34CAMK/CAMK1 protein kinase [Saprolegnia diclina VS2... [more]
gi|813120673|ref|XP_012196424.1|2.445e-4052.34CAMK/CAMK1 protein kinase [Saprolegnia parasitica ... [more]
gi|1173951421|gb|OQR99307.1|6.135e-4052.34kinase [Thraustotheca clavata][more]
gi|695387665|ref|XP_009518955.1|6.425e-4051.20protein kinase [Phytophthora sojae] >gi|348683852|... [more]
gi|1173951080|gb|OQR98993.1|7.363e-4053.13protein kinase [Achlya hypogyna][more]
gi|325180867|emb|CCA15277.1|2.731e-3950.00protein kinase putative [Albugo laibachii Nc14][more]
gi|635364602|emb|CCI46977.1|2.854e-3950.00unnamed protein product [Albugo candida][more]
gi|301114887|ref|XP_002999213.1|2.490e-3851.20protein kinase, putative [Phytophthora infestans T... [more]
gi|570988903|gb|ETP47198.1|2.699e-3851.20CAMK protein kinase [Phytophthora parasitica P1029... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1251rna1251Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications