EWM29420.1, cds1250 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|585111949|gb|EWM29420.1| (calcium calmodulin-dependent protein variant variant [Nannochloropsis gaditana]) HSP 1 Score: 454.136 bits (1167), Expect = 2.332e-161 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA 228
MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA
Sbjct: 1 MPPFPPVLKPPLVSFTALRAVVFPRHVFFSFQSLTPLIPFLPPSPPPSRRASFLLPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPTPGLPSSGPSSTGRGAAGKGSGKENVGEKRPGEVVVGAEA 228
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|669156874|ref|XP_008613999.1| (CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20] >gi|530734256|gb|EQC32498.1| CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20]) HSP 1 Score: 156.377 bits (394), Expect = 2.421e-40 Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+ QP+GKP DLW+VG++ Y ML G PF PP+ C+++PV FQ RAW+ S +A F+ LL D KR TA +AL H W T
Sbjct: 632 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGLTGSVGYMAPELFESQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSACMNEPVEFQPRAWKKFSPEAMDFVVHLLERDPTKRFTAEQALTHPWFDT 759
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|813120673|ref|XP_012196424.1| (CAMK/CAMK1 protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641538939|gb|KDO32760.1| CAMK/CAMK1 protein kinase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 156.377 bits (394), Expect = 2.445e-40 Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+ QP+GKP DLW+VG++ Y ML G PF PP+ C+++PV FQ RAW+ S +A F+ LL D KR TA +AL H W T
Sbjct: 632 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGLTGSVGYMAPELFESQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSACMNEPVEFQPRAWKKFSPEAMDFVVHLLERDPTKRFTAEQALTHPWFDT 759
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|1173951421|gb|OQR99307.1| (kinase [Thraustotheca clavata]) HSP 1 Score: 155.221 bits (391), Expect = 6.135e-40 Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+ QP+GKP DLW+VG++ Y ML G PF PP+ C+ +PV+FQ R W+ S +AQ F+ LL D KR TA +AL H W T
Sbjct: 616 LQVEICDFGLSVKVPDVRFFKHTGDVHKVPFTGMTGSVGYMAPELFDSQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSSCITEPVQFQPRLWKKFSPEAQDFVTHLLERDPTKRFTAEQALTHPWFDT 743
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|695387665|ref|XP_009518955.1| (protein kinase [Phytophthora sojae] >gi|348683852|gb|EGZ23667.1| protein kinase [Phytophthora sojae]) HSP 1 Score: 154.451 bits (389), Expect = 6.425e-40 Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = 0
Query: 58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G PF PP C+++ F R W IS DA+ + RLL D KR TA EAL H W ++
Sbjct: 521 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWTTISADAKDLVQRLLERDPTKRLTAAEALAHSWFES 645
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|1173951080|gb|OQR98993.1| (protein kinase [Achlya hypogyna]) HSP 1 Score: 155.221 bits (391), Expect = 7.363e-40 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPDVRFFK TGD+++VPF+ + G+ G++ PE+ QP+GKP DLW+VG+I Y ML G PF PP+ C ++PV FQ R W+ S +AQ F+ LL D KR TA +AL H W T
Sbjct: 617 LQVELCDFGLSVKVPDVRFFKHTGDVHKVPFTGMTGSVGYMAPELFDSQPYGKPIDLWSVGIIVYEMLTGFQPFYPPSACTNEPVEFQPRMWKKFSPEAQDFVTHLLERDPTKRFTAEQALTHPWFDT 744
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|325180867|emb|CCA15277.1| (protein kinase putative [Albugo laibachii Nc14]) HSP 1 Score: 152.91 bits (385), Expect = 2.731e-39 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPD RFFK TGD+++VPF+++ GT G+I PE++++QP+GKP D+W++G+I Y ML G PF PP C+++ V F W IS A+H + LL D KR TA +AL H W T
Sbjct: 515 LQVELCDFGLSIKVPDARFFKLTGDVHKVPFTQVTGTPGYIAPELLQRQPYGKPVDMWSIGIIIYEMLTGYRPFYPPRACMEEDVDFGDTTWHKISPQAKHLVQHLLDRDPMKRFTAEQALSHEWFDT 642
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|635364602|emb|CCI46977.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 152.91 bits (385), Expect = 2.854e-39 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 0
Query: 55 LPAQVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
L ++CDFGLS KVPD RFFK TGD+++VPF+++ GT G+I PE++++QP+GKP D+W++G+I Y ML G PF PP C+++ V F W IS A+H + LL D KR TA +AL H W T
Sbjct: 533 LQVELCDFGLSIKVPDARFFKLTGDVHKVPFTQVTGTPGYIAPELLQRQPYGKPVDMWSIGIIIYEMLTGYRPFYPPRACVEEDVDFGDATWHKISPQAKHLVQHLLERDPTKRFTAEQALSHEWFDT 660
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|301114887|ref|XP_002999213.1| (protein kinase, putative [Phytophthora infestans T30-4] >gi|262111307|gb|EEY69359.1| protein kinase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 150.599 bits (379), Expect = 2.490e-38 Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 0
Query: 58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G PF PP C+++ F R W+ IS DA+ + RLL D KR TA EAL H W ++
Sbjct: 564 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWKTISADAKDLVQRLLQRDPTKRLTAAEALAHTWFES 688
BLAST of EWM29420.1 vs. NCBI_GenBank
Match: gi|570988903|gb|ETP47198.1| (CAMK protein kinase [Phytophthora parasitica P10297]) HSP 1 Score: 150.599 bits (379), Expect = 2.699e-38 Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 0
Query: 58 QVCDFGLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQT 182
++CDFGLS KVPDVRFFK TGD+++VPF+ + GT G+I PE++++Q +GKP D+W+VG+I + ML G PF PP C+++ F R W+ IS DA+ + RLL D KR TA EAL H W ++
Sbjct: 566 ELCDFGLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACINEDADFSDRVWKTISADAKDLVERLLERDPAKRLTAAEALAHSWFES 690 The following BLAST results are available for this feature:
BLAST of EWM29420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|