EWM29425.1, cds1248 (CDS) Nannochloropsis gaditana

Overview
NameEWM29425.1
Unique Namecds1248
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:142268..143671 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29425.1
Productisovaleryl- dehydrogenase
Orig transcript idgnl|cribi|Naga_100707g2.7308.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:142268..143671 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR006089Acyl-CoA_DH_CS
IPR009075AcylCo_DH/oxidase_C
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR013786AcylCoA_DH/ox_N
Homology
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|585111955|gb|EWM29425.1| (isovaleryl- dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0
Query:    1 MLTGFNFSRRAGRARLFSPLPCPSFGAATPPSLIAQRPALQCITTIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKHHERLL 467
            MLTGFNFSRRAGRARLFSPLPCPSFGAATPPSLIAQRPALQCITTIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKHHERLL
Sbjct:    1 MLTGFNFSRRAGRARLFSPLPCPSFGAATPPSLIAQRPALQCITTIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKHHERLL 467          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|1129168482|gb|OLP79354.1| (Isovaleryl-CoA dehydrogenase, mitochondrial [Symbiodinium microadriaticum])

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 290/403 (71.96%), Postives = 333/403 (82.63%), Query Frame = 0
Query:   64 SSEPVPSPPVQI-DP---FNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKH 462
            S+EP    P  + DP   F+P+EEH  LR  VR+F E EV+PQA+ FNR E+ NLPLFRKLGELGLLG++VP EYGGSGMDATA  I HEEL+A DPAFCLAYLAHS+LFVNNLAQNG+ AQK K+LP+A  G+ V GMCMSEP  GTDVLGM T AT+  +G  Y++NGAKMWITNGTVDGK TGD YLVYA+TG  ++D+S+FLVEKG+ GF LGQK++DK GMRASMTAELVF DCR+P  NLVG+E  AA CMMRNLEIERV LA+MS+G+ARRCVE MN YA++RKAFG  LN+FGQ+QR +AESYAEY AGR+Y+Y  A  L+L S GNGLDADGVKLYC  MGK VADRAIQVLGGYGYVGEY VERLWRDAKLLEIGGGTNEAHHKN+VRDL + 
Sbjct:   50 SAEPTSQVPAPVEDPGTIFSPSEEHQALREMVRSFAEAEVEPQAIDFNREEKMNLPLFRKLGELGLLGVTVPEEYGGSGMDATAAVIVHEELAAVDPAFCLAYLAHSMLFVNNLAQNGNEAQKQKWLPSAVDGSKVCGMCMSEPAVGTDVLGMKTTATR--EGDEYVINGAKMWITNGTVDGKETGDAYLVYARTGSTSRDISLFLVEKGTKGFSLGQKIQDKCGMRASMTAELVFQDCRIPASNLVGQEGKAALCMMRNLEIERVALASMSLGIARRCVEEMNRYAKDRKAFGSQLNSFGQIQRFIAESYAEYQAGRSYVYQTAKHLNLESVGNGLDADGVKLYCGHMGKMVADRAIQVLGGYGYVGEYNVERLWRDAKLLEIGGGTNEAHHKNIVRDLSRQ 450          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|298714025|emb|CBJ27257.1| (isovaleryl-CoA dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0
Identity = 283/422 (67.06%), Postives = 332/422 (78.67%), Query Frame = 0
Query:   41 QCITTIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKH 462
            QC++ +        V+Q  R R +     S     D FNPTEEH  LR  VR+FVE EVDPQAL +NR E+FN   F++LGELGLLG++V  +YGGSGMDA+A  I HEELSAADPA CL+YLAHS+LFVNNL QNGS  Q+S++LP+AC G+ + GMCMSEPGAGTDVLGM T A  + DG  + ++GAKMWITNGT DG +TGDV+LVYA+TG   +D+SMF+VEKG PGF LGQK+E K GMRASMTAELVFD   V  E+LVG E+GA  CMMRNLEIERV LAAM VG+ARRC+E MN Y +ERKAFG P+N+FGQ+Q+H+A+SYAEYMAG+ YLY VA  LDLSS+GNGLDADG KLYC  M K VADRA+QVLGGYGY  EYQ+ERLWRDAKLLEIGGGT EAHHKNMVRDL K+
Sbjct:   19 QCLSLLVPD----VVDQGLRLRSAGARRRSTTGASDFFNPTEEHQQLREMVRSFVENEVDPQALQYNREEKFNAEAFKRLGELGLLGVTVAPQYGGSGMDASAACIVHEELSAADPALCLSYLAHSMLFVNNLEQNGSDEQRSRFLPSACEGSTIAGMCMSEPGAGTDVLGMTTKAVPSPDGLSFKIDGAKMWITNGTTDGLTTGDVFLVYARTGPGRQDISMFIVEKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGDENGAMLCMMRNLEIERVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQKHIADSYAEYMAGKHYLYAVAANLDLSSTGNGLDADGTKLYCTTMAKNVADRAMQVLGGYGYCDEYQIERLWRDAKLLEIGGGTLEAHHKNMVRDLAKN 436          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|1173960996|gb|OQS07073.1| (isovaleryl-CoA dehydrogenase [Thraustotheca clavata])

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 270/420 (64.29%), Postives = 324/420 (77.14%), Query Frame = 0
Query:   43 ITTIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQ---AAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDL 459
            + ++  +HS  F      R FSS+P       +D +NPTEEH  LR  +R+FV+ +V+PQA+ FNR E+FN+ LFR+LGELGLLG++VP +YGGSGMDA A  IAHEELS++DPAFCL++LAHS+LF NNLA+NGS  Q +KYLPAAC G A+ GM MSEP  GTDVLGM T ATK  D   YILNG KMWITNG ++    GD +LVYA+TG    A +D S F+VEKG  GF LGQ+++DK GMRASMTAELVF++CRVP  NL+G E  A  CMMRNLEIERV LAAMS+G+ARR VEVMN+YA+ER AFG+PLN +GQ+Q ++A+SYAEYMAGRAY Y  A  + L + GN +D DGVKLYC  M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNM RDL
Sbjct:    3 VLSLMARHSMAFARPTSARAFSSKP-------LDLYNPTEEHQALREMLRSFVKDKVEPQAIDFNRAEKFNVDLFRELGELGLLGITVPEKYGGSGMDALAAVIAHEELSSSDPAFCLSFLAHSMLFANNLARNGSDEQCAKYLPAACTGEAICGMAMSEPAVGTDVLGMKTTATKVGD--EYILNGTKMWITNGAINDTDLGDTFLVYARTGNSGSARQDYSSFIVEKGFEGFSLGQRIKDKCGMRASMTAELVFENCRVPAANLIGTEGSAVICMMRNLEIERVTLAAMSLGIARRSVEVMNSYAKERVAFGKPLNYYGQIQANIAKSYAEYMAGRAYTYNTARLMKLDAVGNRIDTDGVKLYCGDMAKTVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMSRDL 413          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|1210511560|dbj|GAX29374.1| (isovaleryl-CoA dehydrogenase [Fistulifera solaris])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 274/423 (64.78%), Postives = 329/423 (77.78%), Query Frame = 0
Query:   46 IATKHSRPFVNQ-VPRRRF-SSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVP-AEYGGSG---MDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFG-QPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKK 461
            + T+  RP   Q V  RRF S+ P+ +       +NPT EH  LR T+R+FV +EV+PQA  FN +E+FN+PLFRKL +LGLLGL+VP  EYGG+G     ATAV   HEELS +DPA CL+YLAHSLL +NNL+ N S  QK+++LPAAC GT +GGMCMSEP AGTDVLGM T A +  D  H+ L G K+WITNGT+DG+ TGD++LVYA+TG    D++ F+VEKG  GFRLGQK+ +KLGMRASMTAELVFD  R+P EN+VG  +GA  CMMRNLEIER+GLAAMSVG+ARRC++ M AYA ER AFG + L  FGQ+QR +AESYAEYMAGR+Y+Y VAN L+LS+ GNGLDADG KL+CA M K VADRAIQVLGG GY GEY VERLWRDAKL+EIGGGTNE+HHKNM RDL+K
Sbjct:    3 LTTRFIRPRSKQLVLSRRFRSTTPLSTL------WNPTSEHAALRATLRSFVAQEVEPQARTFNEQEQFNVPLFRKLADLGLLGLTVPEIEYGGTGWTEFTATAVCAVHEELSYSDPALCLSYLAHSLLLINNLSVNASPEQKARFLPAACDGTHIGGMCMSEPQAGTDVLGMQTKAVQDGD-YHWRLTGTKLWITNGTLDGQDTGDLFLVYARTGPGKTDITQFVVEKGMEGFRLGQKINNKLGMRASMTAELVFDQVRIPNENIVGTVNGATLCMMRNLEIERLGLAAMSVGIARRCIDEMKAYALERTAFGAKNLFEFGQIQRLIAESYAEYMAGRSYVYAVANALNLSTHGNGLDADGTKLFCASMAKTVADRAIQVLGGNGYTGEYNVERLWRDAKLMEIGGGTNESHHKNMSRDLRK 418          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|669158970|ref|XP_008615047.1| (isovaleryl-CoA dehydrogenase [Saprolegnia diclina VS20] >gi|530733406|gb|EQC31648.1| isovaleryl-CoA dehydrogenase [Saprolegnia diclina VS20])

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 265/420 (63.10%), Postives = 322/420 (76.67%), Query Frame = 0
Query:   45 TIATKHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTG---QAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKK 461
            ++  + S     Q PR  FS+          D +NPTEEH  LR  +R+FV+ +V+PQA+ +NR E+FN+ LFR+LGELGLLG++VP +YGGS MDA A  IAHEELS++DPAFCL++LAHS+LF NNLA+NGS  Q +KYLPAAC+G A+ GM MSEP  GTDVLGM T ATK  D   Y+LNG KMWITNG ++    GD +LVYA+TG    A +D S F+VEKG  GF LGQ+++DK GMRASMTAELVF++CRVP  NL+GKE  A  CMMRNLEIERV LAAMS+G+ARR +EVMNAYA++R AFG+PLN +GQ+Q ++A+SYAEYMAGRAY Y  A  + L + GN +D DGVKLYC  M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNM RDL +
Sbjct:    5 SLIARRSIAMARQTPRS-FST-------ASYDLYNPTEEHKALREMLRSFVKDKVEPQAIDYNRAEKFNVDLFRELGELGLLGITVPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFTNNLARNGSDEQCAKYLPAACSGEAICGMAMSEPAVGTDVLGMKTTATKVGD--EYVLNGTKMWITNGAINDTELGDTFLVYARTGTSGNAREDFSSFIVEKGFEGFSLGQRIKDKCGMRASMTAELVFENCRVPAANLIGKEGSAVICMMRNLEIERVTLAAMSLGIARRSIEVMNAYAKDRVAFGKPLNYYGQIQANIAKSYAEYMAGRAYTYNTARLMKLDAVGNRVDTDGVKLYCGDMAKTVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMSRDLMR 414          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|301118951|ref|XP_002907203.1| (isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] >gi|262105715|gb|EEY63767.1| isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0
Identity = 262/411 (63.75%), Postives = 317/411 (77.13%), Query Frame = 0
Query:   60 RRRFSSEPVP-----SPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAK---DVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKH 462
            RR F++         S    +D F PTEEH  LR  +  FV+ +VDPQAL  +R E+FN+ LFR+LG+LGLLG++ P +YGGS MDA A  IAHEELS++DPAFCL++LAHS+LFVNN+A+N S AQ  KYLP AC+G  + GM MSEP  GTDVLGM T A K+  G  Y+LNG KMWITNG +D    GD +LVYA+TG + K   D S FLVEKG  GF LGQ+++DK GMRAS TAELVF++C+VP+EN+VG E  A  CMMRNLEIERV LAAMS+G+ARR +EVM+ YA+ER+AFGQPLN FGQ+Q+++AESYAEYMAGRAY+Y  A +L L S GN +D DGVKLYC  M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNMV+DL ++
Sbjct:   13 RRSFTAAECSLARSMSSSRDLDLFTPTEEHGVLREMLTGFVKTKVDPQALEHDREEKFNVKLFRELGDLGLLGITAPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSDCGKFYLLNGTKMWITNGALDDTELGDTFLVYARTGNSGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGQPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|1173940969|gb|OQR90241.1| (isovaleryl-CoA dehydrogenase [Achlya hypogyna])

HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0
Identity = 264/416 (63.46%), Postives = 319/416 (76.68%), Query Frame = 0
Query:   49 KHSRPFVNQVPRRRFSSEPVPSPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQ---AAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKK 461
            + S  F  QVP     +    S    +D +NPTEEH  LR  +R+FV+ +V+PQA  FNR E+FN+ LFR+LGELGLLG++VP +YGGS MDA A  IAHEELS++DPAFCL++LAHS+LF NNLA+NGS  Q +KYLPAAC+G A+ GM MSEP  GTDVLGM T A K  D   YILNG KMWITNG ++    GD +LVYA+TG    A +D S F+VEKG  GF LGQ+++DK GMRASMTAELVF++CRVP  NL+G E  A  CMMRNLEIERV LAAMS+G+ARR +EVMN+YA++R AFG+PLN +GQ+Q ++A+SYAEYMAGRAY+Y  A  + L + GN +D DGVKLYC  M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNM RDL +
Sbjct:    9 RRSVAFARQVP-----AARSFSSAASLDLYNPTEEHQALREMLRSFVKDKVEPQANDFNRAEKFNVDLFRELGELGLLGITVPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFTNNLARNGSDEQCAKYLPAACSGEAICGMAMSEPSVGTDVLGMKTTAKKVGD--EYILNGTKMWITNGAINDTDLGDTFLVYARTGNSGNARQDFSSFIVEKGFEGFSLGQRIKDKCGMRASMTAELVFENCRVPAANLIGTEGSAVICMMRNLEIERVTLAAMSLGIARRSIEVMNSYAKDRVAFGKPLNYYGQIQANIAKSYAEYMAGRAYVYNTARVMKLDAVGNRIDTDGVKLYCGDMAKTVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMSRDLMR 417          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|695382885|ref|XP_009517540.1| (hypothetical protein PHYSODRAFT_553331 [Phytophthora sojae] >gi|348690451|gb|EGZ30265.1| hypothetical protein PHYSODRAFT_553331 [Phytophthora sojae])

HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0
Identity = 257/396 (64.90%), Postives = 315/396 (79.55%), Query Frame = 0
Query:   70 SPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTG---QAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKH 462
            S   ++D F PTEEH  LR  +  FV+ +V+PQAL  +R E+FN+ LFR+LGELGLLG++ P +YGGS MDA A  IAHEELS++DPAFCL++LAHS+LFVNN+A+N S AQ  KYLP AC+G  + GM MSEP  GTDVLGM T A K+  G +Y+LNG KMWITNG ++    GD +LVYA+TG   +A +D S FLVEKG  GF LGQ+++DK GMRAS TAELVF++C+VP+EN+VG E  A  CMMRNLEIERV LAAMS+G+ARR +EVM+ YA+ER+AFG+PLN FGQ+Q+++AESYAEYMAGRAY+Y  A +L L S GN +D DGVKLYC  M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNMV+DL ++
Sbjct:   28 SSSSELDLFTPTEEHGALREMLAGFVKTKVEPQALEHDRAEKFNVKLFRELGELGLLGITAPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSECGKYYVLNGTKMWITNGALNDTELGDTFLVYARTGNTGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGSEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGRPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423          
BLAST of EWM29425.1 vs. NCBI_GenBank
Match: gi|673032908|ref|XP_008870415.1| (hypothetical protein H310_06946 [Aphanomyces invadans] >gi|574474415|gb|ETW01417.1| hypothetical protein H310_06946 [Aphanomyces invadans])

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 261/393 (66.41%), Postives = 310/393 (78.88%), Query Frame = 0
Query:   70 SPPVQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTG---QAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMSVGLARRCVEVMNAYAQERKAFGQPLNAFGQVQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDL 459
            S    ++ + PTEEH  LR  +R+FV ++V+PQA  FNR E FN+ LFR+LGELGLLG++VP +YGGSGMDA A  IAHEELS++DPAFCL++LAHS+LF NNLAQNGS AQ +KYLPAA +G A+ GM MSEP  GTDVLGM T A K   G+ Y+LNG KMWITNG ++    GD +LVYA+TG    A +D S F+VEKG  GF LGQ+++DK GMRASMTAELVF++CRVP +NLVG E  A  CMMRNLEIERV LAAMS+G+ARR +EVMNAYA+ER AFG+PLN FGQVQ ++A SYA Y AGRAY+Y  A  L L + GN +D DGVKL+C  M K+VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGTNE+HHKNM RDL
Sbjct:   25 STSAPLNLYAPTEEHHALRDMLRSFVAQKVEPQANEFNRAETFNVDLFRELGELGLLGITVPEKYGGSGMDAVAAVIAHEELSSSDPAFCLSFLAHSMLFANNLAQNGSEAQCAKYLPAASSGDAICGMAMSEPAVGTDVLGMKTTAVK--HGNEYLLNGTKMWITNGAINDTDLGDTFLVYARTGTTGNARQDFSSFIVEKGFDGFSLGQRIKDKCGMRASMTAELVFENCRVPADNLVGTEGAAVLCMMRNLEIERVTLAAMSLGIARRSIEVMNAYAKERSAFGKPLNYFGQVQHNIALSYAHYKAGRAYVYDTARLLKLDTVGNRIDTDGVKLFCGDMAKQVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMSRDL 415          
The following BLAST results are available for this feature:
BLAST of EWM29425.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111955|gb|EWM29425.1|0.000e+0100.00isovaleryl- dehydrogenase [Nannochloropsis gaditan... [more]
gi|1129168482|gb|OLP79354.1|0.000e+071.96Isovaleryl-CoA dehydrogenase, mitochondrial [Symbi... [more]
gi|298714025|emb|CBJ27257.1|0.000e+067.06isovaleryl-CoA dehydrogenase [Ectocarpus siliculos... [more]
gi|1173960996|gb|OQS07073.1|0.000e+064.29isovaleryl-CoA dehydrogenase [Thraustotheca clavat... [more]
gi|1210511560|dbj|GAX29374.1|0.000e+064.78isovaleryl-CoA dehydrogenase [Fistulifera solaris][more]
gi|669158970|ref|XP_008615047.1|0.000e+063.10isovaleryl-CoA dehydrogenase [Saprolegnia diclina ... [more]
gi|301118951|ref|XP_002907203.1|0.000e+063.75isovaleryl-CoA dehydrogenase, putative [Phytophtho... [more]
gi|1173940969|gb|OQR90241.1|0.000e+063.46isovaleryl-CoA dehydrogenase [Achlya hypogyna][more]
gi|695382885|ref|XP_009517540.1|0.000e+064.90hypothetical protein PHYSODRAFT_553331 [Phytophtho... [more]
gi|673032908|ref|XP_008870415.1|0.000e+066.41hypothetical protein H310_06946 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1249rna1249Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications