EWM29426.1, cds1247 (CDS) Nannochloropsis gaditana

Overview
NameEWM29426.1
Unique Namecds1247
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:140566..141277 -

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Properties
Property NameValue
Start range140566
Start range.
Protein idEWM29426.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100707g1.7309.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:140566..141277 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29426.1 vs. NCBI_GenBank
Match: gi|585111956|gb|EWM29426.1| (hypothetical protein Naga_100707g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 472.241 bits (1214), Expect = 3.361e-168
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 
Query:    1 MAWKTCPASKYLGIIVFMTVLVVSHAFQSSAPWVSRIGTARREFVASERCRKSPTHPPLWAAPATEPAPSVAQDVEDEAKGAQVTESDVGGTLWGVRGREEEGSVRGTGPTPESLEANLGWTEDFLSNIGLSGDTLLDNLRRSADQDVSSNTLKAILAAQEESRSLLAKLQAELLSTSAYAASKALADSKLLISVGIVVASELAQVLARPLLPAPSDSTPQGTPVPPSSPAQGGPWT 237
            MAWKTCPASKYLGIIVFMTVLVVSHAFQSSAPWVSRIGTARREFVASERCRKSPTHPPLWAAPATEPAPSVAQDVEDEAKGAQVTESDVGGTLWGVRGREEEGSVRGTGPTPESLEANLGWTEDFLSNIGLSGDTLLDNLRRSADQDVSSNTLKAILAAQEESRSLLAKLQAELLSTSAYAASKALADSKLLISVGIVVASELAQVLARPLLPAPSDSTPQGTPVPPSSPAQGGPWT
Sbjct:    1 MAWKTCPASKYLGIIVFMTVLVVSHAFQSSAPWVSRIGTARREFVASERCRKSPTHPPLWAAPATEPAPSVAQDVEDEAKGAQVTESDVGGTLWGVRGREEEGSVRGTGPTPESLEANLGWTEDFLSNIGLSGDTLLDNLRRSADQDVSSNTLKAILAAQEESRSLLAKLQAELLSTSAYAASKALADSKLLISVGIVVASELAQVLARPLLPAPSDSTPQGTPVPPSSPAQGGPWT 237
The following BLAST results are available for this feature:
BLAST of EWM29426.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111956|gb|EWM29426.1|3.361e-168100.00hypothetical protein Naga_100707g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1248rna1248Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications