EWM29464.1, cds1233 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|585112000|gb|EWM29464.1| (deoxycytidylate deaminase [Nannochloropsis gaditana]) HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 Query: 1 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSSA 252 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSSA Sbjct: 1 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSSA 252
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|585111999|gb|EWM29463.1| (deoxycytidylate deaminase [Nannochloropsis gaditana]) HSP 1 Score: 272.322 bits (695), Expect = 1.354e-89 Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0 Query: 1 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNG 137 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIG G Sbjct: 1 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSASQASMASTAASLTSTTKEEPMGPDRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGKRG 137
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|926638086|ref|XP_013785045.1| (PREDICTED: deoxycytidylate deaminase-like [Limulus polyphemus]) HSP 1 Score: 259.996 bits (663), Expect = 7.704e-85 Identity = 115/162 (70.99%), Postives = 137/162 (84.57%), Query Frame = 0 Query: 90 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 KR DY+ W DYFM +AFLSAMRSKDP++QVGAC+V+ E KIVGIGYNG P GCSDD LPW R++D LDTKY YVCHAEMNAILN+N A L DC +YVALFPCNECAKLIIQSG+K+++YLSDKYH+D MVASR+L D+AGV+YR+H P+ ++I IDF S Sbjct: 16 KRVDYLQWSDYFMAIAFLSAMRSKDPNSQVGACVVNKEKKIVGIGYNGMPNGCSDDDLPWNREADN-ILDTKYPYVCHAEMNAILNKNSADLKDCTIYVALFPCNECAKLIIQSGIKEIVYLSDKYHNDYKMVASRQLLDMAGVKYRQHIPQHSQILIDFDS 176
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|299115986|emb|CBN75987.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 261.151 bits (666), Expect = 7.070e-84 Identity = 119/162 (73.46%), Postives = 138/162 (85.19%), Query Frame = 0 Query: 90 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 KR DY+ WDDYFM VAFLSAMRSKDPSTQVGAC+V+ + +IVGIGYNGFP GCSDD LPWARQ+D LDTKY YVCHAEMNAILN+N A + C +YVALFPCNECAKLIIQSG+++V+YLSDKY + M ASRRLFDL+GV+ R+H PK ++ITIDFSS Sbjct: 121 KRTDYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQADDE-LDTKYPYVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFDLSGVKCRQHIPKQDKITIDFSS 281
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|929412495|ref|XP_005517703.2| (PREDICTED: deoxycytidylate deaminase isoform X2 [Pseudopodoces humilis]) HSP 1 Score: 256.529 bits (654), Expect = 1.849e-83 Identity = 116/175 (66.29%), Postives = 137/175 (78.29%), Query Frame = 0 Query: 77 QDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 Q G S S KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R+ LDTKY YVCHAE+NAI+N+N A + C MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK N+I IDF S Sbjct: 8 QQRNGFSSEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRRG-ANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCNKIIIDFDS 181
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|998684853|ref|XP_015479925.1| (PREDICTED: deoxycytidylate deaminase isoform X4 [Parus major]) HSP 1 Score: 256.144 bits (653), Expect = 2.377e-83 Identity = 116/175 (66.29%), Postives = 137/175 (78.29%), Query Frame = 0 Query: 77 QDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 Q G S S KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R + LDTKY YVCHAE+NAI+N+N A + C MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK N+I IDF S Sbjct: 8 QQRNGFSSEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTR-TGANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCNKIIIDFDS 181
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|765556693|gb|KJE97002.1| (deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 256.144 bits (653), Expect = 3.059e-83 Identity = 118/193 (61.14%), Postives = 145/193 (75.13%), Query Frame = 0 Query: 59 DRRTTVTTPGQVSKTGTAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 + +T+ P VS A +V KR+DY+ W DYFM VAFLSA RSKDPS+QVGAC+V+ ENKIVGIGYNG P GC+DD LPWAR ++ LDTKY YVCHAE+NA+LN+N + + C +YVALFPCNECAK+IIQSG+K+VIY SDKYHD V SRRLFD+AG++YR+H PK+ +ITIDF S Sbjct: 9 NHQTSTFEPATVSDNAPA----------AVKKRQDYLPWADYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAESP-LDTKYMYVCHAELNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIYKSDKYHDRPEFVVSRRLFDMAGIKYRQHIPKMKQITIDFGS 190
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|1062763905|ref|XP_017926050.1| (PREDICTED: deoxycytidylate deaminase isoform X3 [Manacus vitellinus]) HSP 1 Score: 255.373 bits (651), Expect = 4.871e-83 Identity = 115/175 (65.71%), Postives = 138/175 (78.86%), Query Frame = 0 Query: 77 QDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 ++ + S S KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V+TENKIVGIGYNG P GCSDD LPW R + LDTKY YVCHAE+NAI+N+N A + C MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK N+I IDF S Sbjct: 4 KEVESFSNETSCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDVLPWTRTA-ANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTMEMTAARRMFDLAGIIYREFKPKCNKIIIDFDS 177
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|695139718|ref|XP_009512287.1| (PREDICTED: deoxycytidylate deaminase, partial [Phalacrocorax carbo] >gi|679191403|gb|KFW81720.1| Deoxycytidylate deaminase, partial [Phalacrocorax carbo]) HSP 1 Score: 254.988 bits (650), Expect = 4.995e-83 Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 0 Query: 86 GSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 S KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R + LDTKY YVCHAE+NAI+N+N A + C MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD A M A+RR+FDLAGV YR+ PK N+I IDF S Sbjct: 5 ASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTA-AHRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTAEMTAARRMFDLAGVTYREFKPKCNKIIIDFDS 169
BLAST of EWM29464.1 vs. NCBI_GenBank
Match: gi|678197209|gb|KFV64191.1| (Deoxycytidylate deaminase, partial [Picoides pubescens]) HSP 1 Score: 254.988 bits (650), Expect = 5.752e-83 Identity = 114/166 (68.67%), Postives = 135/166 (81.33%), Query Frame = 0 Query: 86 GSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSS 251 S TKREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R + LDTKY YVCHAE+NAI+N+N A + C MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK N+I IDF S Sbjct: 4 ASCTKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTA-AHRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTVEMTAARRMFDLAGIIYREFKPKCNKIIIDFDS 168 The following BLAST results are available for this feature:
BLAST of EWM29464.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|