EWM29451.1, cds1228 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|585111987|gb|EWM29451.1| (small ubiquitin-like modifier [Nannochloropsis gaditana]) HSP 1 Score: 236.498 bits (602), Expect = 5.627e-79 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 Query: 1 MKKTNPLYHSSSSTLANQARTMATVKTDTTATEPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC 115 MKKTNPLYHSSSSTLANQARTMATVKTDTTATEPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC Sbjct: 1 MKKTNPLYHSSSSTLANQARTMATVKTDTTATEPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC 115
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|219119533|ref|XP_002180525.1| (small ubiquitin-like modifier [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407998|gb|EEC47933.1| small ubiquitin-like modifier [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 117.857 bits (294), Expect = 3.825e-32 Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 36 SESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 +ESIT+RV+DQTGEET FK+KKTTKM+KVF +YA RKGV V+SLRFLLDG RI QT LELED+DQID +LEQ GG Sbjct: 14 AESITVRVRDQTGEETFFKIKKTTKMQKVFETYATRKGVQVNSLRFLLDGDRITPDQTPKMLELEDQDQIDCVLEQTGG 92
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|1173929736|gb|OQR82913.1| (small ubiquitin-like modifier (SUMO) [Achlya hypogyna]) HSP 1 Score: 117.472 bits (293), Expect = 4.066e-32 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0 Query: 33 EPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC 115 E K ++IT+RVKDQ+GEET FKVK TKMEK+F++YA RKGV V +LRFLLDG RI QT LELED+DQID LEQ+GGC Sbjct: 13 EDKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVSALRFLLDGTRIAPDQTPKMLELEDQDQIDCALEQVGGC 95
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|1072237719|gb|OEU22446.1| (small ubiquitin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 116.701 bits (291), Expect = 7.870e-32 Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 0 Query: 31 ATEPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 A E K+E IT+RV+DQTGEET FK+KK+TKM KVF +YA RKGV + SLRFLLDG+RI + T +LEL+D+DQID MLEQ GG Sbjct: 10 APEAKNEPITIRVRDQTGEETFFKIKKSTKMSKVFNTYAQRKGVQMSSLRFLLDGERIAETMTPQDLELDDQDQIDCMLEQSGG 93
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|669164958|ref|XP_008618041.1| (hypothetical protein SDRG_13722 [Saprolegnia diclina VS20] >gi|813177535|ref|XP_012205237.1| hypothetical protein SPRG_10888 [Saprolegnia parasitica CBS 223.65] >gi|530730151|gb|EQC28393.1| hypothetical protein SDRG_13722 [Saprolegnia diclina VS20] >gi|641529953|gb|KDO24101.1| hypothetical protein SPRG_10888 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 116.701 bits (291), Expect = 9.619e-32 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0 Query: 33 EPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC 115 E K ++IT+RVKDQ+GEET FKVK TKMEK+F++YA RKGV V +LRFLLDG RI QT LELED+DQID LEQ+GGC Sbjct: 14 EDKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIAADQTPKMLELEDQDQIDCALEQVGGC 96
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|397570712|gb|EJK47429.1| (hypothetical protein THAOC_33854 [Thalassiosira oceanica]) HSP 1 Score: 119.783 bits (299), Expect = 1.053e-31 Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 36 SESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 +E IT+RVKDQTGEETMFKVKKTTKM+K+F +YA RKGV+ SLRFLLDG RI+ QT LELEDEDQID +L Q+GG Sbjct: 12 NEPITIRVKDQTGEETMFKVKKTTKMQKIFGAYAQRKGVDPSSLRFLLDGDRIQGDQTPKMLELEDEDQIDCVLAQMGG 90 HSP 2 Score: 99.7525 bits (247), Expect = 5.780e-24 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0 Query: 30 TATEPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGV--------------------NVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 T E SE +T+RVKDQ GEETMFK+KK+T+++KVFA+YA RKGV N +RF+LDG+ IE T +L+LED DQID L Q+GG Sbjct: 95 TKPEGGSEQLTIRVKDQNGEETMFKIKKSTRLKKVFAAYAARKGVEASASESFCSSITCVSFCFLNPSEVRFMLDGENIEPDSTPGDLDLEDNDQIDCFLAQVGG 199
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|953488195|emb|CEG48212.1| (Ubiquitin-like proteins [Plasmopara halstedii]) HSP 1 Score: 116.701 bits (291), Expect = 1.510e-31 Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0 Query: 35 KSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 K+E+IT+RVKDQ+GEET FKVK TKMEK+F++YA RKGV V +LRFLLDG RI QT LELED+DQID LEQ+GG Sbjct: 29 KTEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPVSALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 108
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|1210512726|dbj|GAX28316.1| (small ubiquitin-related modifier [Fistulifera solaris] >gi|1210527772|dbj|GAX13529.1| small ubiquitin-related modifier [Fistulifera solaris]) HSP 1 Score: 114.775 bits (286), Expect = 3.556e-31 Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 0 Query: 33 EPKSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 EP +++T+R++DQ GEET FK+KKTTKM+KVF +YA RKG+ + SLRFLLDG+R+E T LELED+DQID MLEQ GG Sbjct: 6 EPNPDALTIRIRDQQGEETFFKIKKTTKMQKVFETYATRKGLQIASLRFLLDGERVEPTSTPKMLELEDQDQIDCMLEQAGG 87
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|695433444|ref|XP_009531178.1| (hypothetical protein PHYSODRAFT_355014 [Phytophthora sojae] >gi|348673930|gb|EGZ13749.1| hypothetical protein PHYSODRAFT_355014 [Phytophthora sojae]) HSP 1 Score: 114.775 bits (286), Expect = 5.727e-31 Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 35 KSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 K+E+IT+RVKDQ+GEET FKVK TKMEK+F++YA RKGV +LRFLLDG RI QT LELED+DQID LEQ+GG Sbjct: 20 KAEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPASALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 99
BLAST of EWM29451.1 vs. NCBI_GenBank
Match: gi|1214690574|gb|OWZ05755.1| (Small ubiquitinlike modifier (SUMO) protein [Phytophthora megakarya]) HSP 1 Score: 114.39 bits (285), Expect = 6.724e-31 Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 35 KSESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGG 114 K+E+IT+RVKDQ+GEET FKVK TKMEK+F++YA RKGV +LRFLLDG RI QT LELED+DQID LEQ+GG Sbjct: 19 KAEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPASALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 98 The following BLAST results are available for this feature:
BLAST of EWM29451.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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