EWM29461.1, cds1227 (CDS) Nannochloropsis gaditana

Overview
NameEWM29461.1
Unique Namecds1227
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:104671..104744 -
Alignment locationCM002457.1:104399..104603 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29461.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100083g8.6788.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:104671..104744 -
CM002457.1supercontigCM002457.1:104399..104603 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29461.1 vs. NCBI_GenBank
Match: gi|585111997|gb|EWM29461.1| (hypothetical protein Naga_100083g8 [Nannochloropsis gaditana])

HSP 1 Score: 174.096 bits (440), Expect = 5.096e-55
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MEGMALHRSLGPGRRMGREEAREEAPRNGGKIGRQRWSHGTGEESIRWGDLQGYVKARGRARVCAREREWRKERLPVWKVERERKRERARGR 92
            MEGMALHRSLGPGRRMGREEAREEAPRNGGKIGRQRWSHGTGEESIRWGDLQGYVKARGRARVCAREREWRKERLPVWKVERERKRERARGR
Sbjct:    1 MEGMALHRSLGPGRRMGREEAREEAPRNGGKIGRQRWSHGTGEESIRWGDLQGYVKARGRARVCAREREWRKERLPVWKVERERKRERARGR 92
The following BLAST results are available for this feature:
BLAST of EWM29461.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111997|gb|EWM29461.1|5.096e-55100.00hypothetical protein Naga_100083g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1228rna1228Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications