EWM29449.1, cds1224 (CDS) Nannochloropsis gaditana

Overview
NameEWM29449.1
Unique Namecds1224
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:101484..101699 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29449.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100083g11.6776.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:101484..101699 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29449.1 vs. NCBI_GenBank
Match: gi|585111985|gb|EWM29449.1| (hypothetical protein Naga_100083g11 [Nannochloropsis gaditana])

HSP 1 Score: 146.362 bits (368), Expect = 1.424e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MFTHLLSTTRSHRDRFRPQQKDDAVAAALLPGIHQIVSRSLATLLLQYFKGNPSLHTYVPRDNHAPFSAKS 71
            MFTHLLSTTRSHRDRFRPQQKDDAVAAALLPGIHQIVSRSLATLLLQYFKGNPSLHTYVPRDNHAPFSAKS
Sbjct:    1 MFTHLLSTTRSHRDRFRPQQKDDAVAAALLPGIHQIVSRSLATLLLQYFKGNPSLHTYVPRDNHAPFSAKS 71
The following BLAST results are available for this feature:
BLAST of EWM29449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111985|gb|EWM29449.1|1.424e-44100.00hypothetical protein Naga_100083g11 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1225rna1225Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications