EWM29454.1, cds1222 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|585111990|gb|EWM29454.1| (hypothetical protein Naga_100083g13 [Nannochloropsis gaditana]) HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query: 1 MLLRNTSFAVTLVPVITAWMAGLAESFIIPSRVVTRSSALSMSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK 300
MLLRNTSFAVTLVPVITAWMAGLAESFIIPSRVVTRSSALSMSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK
Sbjct: 1 MLLRNTSFAVTLVPVITAWMAGLAESFIIPSRVVTRSSALSMSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK 300
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|553192560|ref|XP_005855597.1| (hypothetical protein NGA_0640000 [Nannochloropsis gaditana CCMP526] >gi|422293460|gb|EKU20760.1| hypothetical protein NGA_0640000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 517.694 bits (1332), Expect = 0.000e+0 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
Query: 42 MSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK 300
MSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKK VKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK
Sbjct: 1 MSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWARNLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKAVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK 259
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|873242457|emb|CEL91696.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 164.081 bits (414), Expect = 1.398e-45 Identity = 103/233 (44.21%), Postives = 150/233 (64.38%), Query Frame = 0
Query: 68 ASSFLLSPSPSWARNLPSGPSKAELLEKT-RAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKK 299
A+ FLLS P + +K EL++KT R K E+ +K LA ++ERLE+Q++L EE+ R+++ +E I+ L Y YPTA+KRYLPRVKA AD + ++AG+W KV+++A A+ A LPLKLYASSL GQGL+ S++KV++++ + Y L++F+K V +DT AL SL KM ++L YR+ +ID EDGGVG + + G+ F NNNP LY+K
Sbjct: 19 AAPFLLSLIPLADAD---ALAKDELVKKTMREKTPEEIEAEKEALAQAKRERLEKQKRL-VEEQRRRREEGEQEEGIEPTLYVQYTYPTARKRYLPRVKALADEIGGIAPLVEAGKWGKVKTFAEGTAEGARLPLKLYASSLAGQGLAQSASFIKVMNKEAEEYSASLDSFQKAVNKKDTNTALVSLAKMSTSLSTYRREGKIDTEDGGVGRVESQPR-GSGFFNNNPGLYQK 246
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|551679522|ref|XP_005842513.1| (hypothetical protein GUITHDRAFT_149817, partial [Guillardia theta CCMP2712] >gi|428186683|gb|EKX55533.1| hypothetical protein GUITHDRAFT_149817, partial [Guillardia theta CCMP2712]) HSP 1 Score: 120.553 bits (301), Expect = 1.113e-28 Identity = 80/247 (32.39%), Postives = 136/247 (55.06%), Query Frame = 0
Query: 28 IIPSRVVTRSSALSMSLGHPEQAPSTATRGGYLGAGGFLFASSFLLSPSPSWAR----NLPSGPSKAELLEKTRAKDSEDPVEKKARLAALRKERLERQRQLDAEEEARKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAG--EWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTAR 268
++ + TRSS+ MS+ +T+ R L A + SFLL P+ A+ L + E +E E+KAR+A R+E +R+++LD + +A +++ +V++ +NLR YY+PTA+KRYLPRVK A D L + +Q +W+ VE +A AD +KLY S+L G GLS+ +++ + + D Y ++ ++FK+ V +D++KA++ M+SAL+ YR +
Sbjct: 47 LVGGKGSTRSSSCKMSM------ETTSRRNVLLAAA--VTTGSFLLHADPAAAKKARSTLVAPDGTVETIE-----------ERKARIAKEREEMEKRRQELDQKAKAFEEENGPVQVEMGSNLRGDYYFPTARKRYLPRVKGAYDGLQETIQTIQEASPDWKTVEQFAKGPADVTG-AMKLYVSALGGGGLSIQSKFMEAMGKAADEYDRDYKDFKQAVSKKDSSKAVSIAKSMQSALLAYRSAGK 273
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|219117608|ref|XP_002179596.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408649|gb|EEC48582.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 109.768 bits (273), Expect = 1.149e-24 Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 0
Query: 140 EVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPT 281
E D++ NLRA+YYYPT +KRYLPR+K DA+P A +A+ G+W V +A K AD+ LP++LY SSL G G ++ V++ K +++ D + K + K +D + +L + +AL YR ++ DGG G+ P+
Sbjct: 98 ESDVEPNLRANYYYPTNKKRYLPRIKRCNDAIPDAADAIGTGDWLVVTDFANKIADDTILPMRLYTSSLVGGGTNVKVAFAKEMNKAADDFEKAQKKLVKATAKQDREASSVALEDLATALQTYRVAGKLLGPDGG-GDIPS 238
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|1189389965|gb|OSX76934.1| (hypothetical protein BU14_0167s0009 [Porphyra umbilicalis]) HSP 1 Score: 108.997 bits (271), Expect = 7.299e-24 Identity = 71/187 (37.97%), Postives = 98/187 (52.41%), Query Frame = 0
Query: 119 LERQRQLDAEEEARKKDPNRKEVDIDA---NLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEA--DNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKKK 300
LE + AE EA ++ DA LR SYY PTA+ RYLPRV+ AA++L A A G W + + AA +AA P++LYASSL GQGLS+ K + G+ Y + K K R +L + +A+ YR+ R++ D G+ E T K+GA+FGNNNP LY +
Sbjct: 60 LEAVAKATAEREAAAGGGAPRDAATDAIEPTLRGSYYSPTAKLRYLPRVRRAAESLDEAVVAAADGNWAALAALAAPTGALGDAAAPMRLYASSLAGQGLSIASRAAKEMDAAGEAYAGAIAKLAKGAKKRSPGTVGPALDDLRAAMGAYRRAGRMEA-DWGLSEITTTQKVGAAFGNNNPALYARN 245
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|1210524180|dbj|GAX16909.1| (hypothetical protein FisN_5Hh286 [Fistulifera solaris]) HSP 1 Score: 106.301 bits (264), Expect = 1.242e-23 Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 0
Query: 136 PNRK-EVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPT 281
P +K E I+ NLR++YYYPT +KRYLPR++ ++ +P + L + +WE V+S+A AD+ LPLKLY SSLTG G ++ VSY K + D + + K + +DT A +L M AL YR A + K+D +G+ P+
Sbjct: 71 PQKKSESVIEPNLRSNYYYPTNKKRYLPRIQKCSNMIPNVADLLGSQDWEAVDSFAKTVADDTILPLKLYTSSLTGGGTNVKVSYTKDMYACADQFESNQKRLLKAISKKDTALATEALEGMSEALSKYRTVAGL-KDD--MGDLPS 214
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|224004132|ref|XP_002295717.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209585749|gb|ACI64434.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.071 bits (266), Expect = 1.693e-23 Identity = 53/150 (35.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query: 132 RKKDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPT 281
R + + E +++ NLR++YYYPT + RYLPR+K +D++P A+ +W+ V +A AD+ LP+KLY SSLTG G ++ V + K + + K K+V +D +KA +L M A++ YR + ++ DGG G+ P+
Sbjct: 109 RAVNKGKAESNMEPNLRSNYYYPTNKVRYLPRIKKCSDSIPQVAIAIGNEDWDSVRDFATVVADDTVLPMKLYVSSLTGGGTNVKVGFAKEMMAAAKTFEKNQSLLVKSVDKKDASKASAALEAMSEAMLAYRTSGKLLGPDGG-GDIPS 257
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|1210515681|dbj|GAX25204.1| (hypothetical protein FisN_5Lh286 [Fistulifera solaris]) HSP 1 Score: 105.916 bits (263), Expect = 1.942e-23 Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 0
Query: 136 PNRK-EVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPT 281
P +K E I+ NLR++YYYPT +KRYLPR++ ++ +P + L + +WE V+S+A AD+ LPLKLY SSLTG G ++ VSY K + D + + K + +DT A +L M AL YR A + K+D +G+ P+
Sbjct: 71 PQKKSESVIEPNLRSNYYYPTNKKRYLPRIQKCSNMIPNVADLLGSQDWEAVDSFAKTVADDTILPLKLYTSSLTGGGTNVKVSYTKDMYVCADQFETNQKRLLKAITKKDTALATEALEGMSEALSKYRTVAGL-KDD--MGDLPS 214
BLAST of EWM29454.1 vs. NCBI_GenBank
Match: gi|397568777|gb|EJK46337.1| (hypothetical protein THAOC_34998 [Thalassiosira oceanica]) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-12 Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0
Query: 134 KDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKTVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPT 281
KD + +++ NLR++YYYPT + RYLPR+K +DA+P EA+ +WE V +A G G ++ V + ++ + K K V +D K +L M AL+ YR + R+ DGG G+ P+
Sbjct: 106 KDKGKAASNMEPNLRSNYYYPTNKVRYLPRIKKCSDAIPGVAEAIGREDWEAVNDFAKSR----------------GGGTNVKVGFAGEMTAAAKKFEKNQALLVKAVSKKDVAKTSDALEGMSEALLAYRTSGRLLGPDGG-GDIPS 236 The following BLAST results are available for this feature:
BLAST of EWM29454.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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