EWM29450.1, cds1220 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|553192563|ref|XP_005855598.1| (pre-mRNA-processing factor 17 [Nannochloropsis gaditana CCMP526] >gi|422293461|gb|EKU20761.1| pre-mRNA-processing factor 17 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1294.26 bits (3348), Expect = 0.000e+0 Identity = 608/610 (99.67%), Postives = 608/610 (99.67%), Query Frame = 0 Query: 1 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKL 610 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKE LRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIK Sbjct: 1 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKF 610
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|585111986|gb|EWM29450.1| (pre-mrna-processing factor 17 [Nannochloropsis gaditana]) HSP 1 Score: 1280.39 bits (3312), Expect = 0.000e+0 Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0 Query: 1 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE Sbjct: 1 MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|298712044|emb|CBJ32980.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 306/589 (51.95%), Postives = 390/589 (66.21%), Query Frame = 0 Query: 48 VNSAPFV----------NPALKTVMNRPGFIPPTS---RELTTNVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEG---LRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGE-EEDGPWAPAKEEP-VITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETD----HACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSG-EMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 VN+AP V + + + + R G P + + + N KA LAP+QGP HP RR++ GG TGG E A +E+W+FHEQ+HTFH GYA D G +GN+ + +++G L G N R + A + KG E DLG+ + DG WAP E P T EAGT+T EQ + R +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT + + FHGK + DYQGRSW+ PP G R VE + H C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DG+ K+W V R RRTY GH+AAVR I FS DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY AK+YP ++N+F+ SDNR+ YD +G E+VQEYNHHL VNTV F D+N RF STSDDKK+L+WE++I VPIKYIAEP MHSMPA T P G F QSLDN I + RD+F+ + KK FKGH AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+ K + HD+GPCI + WHP+E S VA+ GWDG+IKLW+ Sbjct: 40 VNAAPNVLVSGAMAQATDSLMSSPLGRLGLKPSSKTGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDS-RGDTVGNLSEHSKRQGDTVLSAEVGGLRRNK-RKKQAGAGAAGAAAVGGEGKGEERGGDLGDSDNDGVWAP--EVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLEPSWVATAGWDGVIKLWD 624
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|1214704169|gb|OWZ16068.1| (Pre-mRNA splicing factor [Phytophthora megakarya]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 298/625 (47.68%), Postives = 383/625 (61.28%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPA-LKTVMNRPGFIPPTSR-ELTTNVKAATLLAPIQGPEHPFRREMDSM-----GGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNV-HNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGV------EEDEDLGEE-EDGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S SD + P S++P ST S+S++ P VNSAPFV + + N+ F+ SR +L N+ + LAP GP E+ + G K G E A ME ++F Q+HT H Q +R N+ N + PA P I + P + +KRK ED G+E DG WAP K++ T E T+TEEQK+ R E E RKA + DE+ D DR E+K HLLP R A E ++F G E DYQGR+WVEPP L+P + DH ++PK+C+H++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER +R Y GH+ AVR INFS DG +FLS GFDRF++LWDTETGQ +++ T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QS++N I ++ RD+FK+ KKVF+GH AG+ACQ FSPN +YL SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S V SCGWDGLIK W+ Sbjct: 6 AYAS-SDDDEVP---RSTSPRSTDSTSLALP---------LVNSAPFVAVSDNQEQANKTAFLAAASRTQLAVNLPVESTLAPFVGPHGGNSTELALLDPLRAGSGKEIVTGVVEKADMEDYSFEAQYHT-HNQTLSR---------NIPRNRAKGAPPSAPALPGEILVDDIVTPGEEDVFTRRAAKKRKNQTLSKERAAAEDFGDEMTDGIWAPYKDKNKHWTDAEQETMTEEQKKLREEHQEAKRRKAEAKQVMDEEMDFDRMVEKKTGHLLPARLKAGQTALEGKSKFMGDQEYDYQGRAWVEPPRTLKPDDGDHQVFMPKKCIHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRAINFSNDGKQFLSCGFDRFIQLWDTETGQTVNSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSMNNHIDVYSARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYLMSGDGEGKLVFWDWKTTKMIKKLRAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 607
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|695399075|ref|XP_009522168.1| (putative pre-mRNA splicing factor [Phytophthora sojae] >gi|348679635|gb|EGZ19451.1| putative pre-mRNA splicing factor [Phytophthora sojae]) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 298/626 (47.60%), Postives = 383/626 (61.18%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPAL---KTVMNRPGFIPP-TSRELTTNVKAATLLAPIQGPEHPFRREMDSM-----GGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEEE-DGPWAPAKEE-PVITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S + E++ S++P ST S S++ P VNSAPFV AL + N+ F+ T +L N+ + LAP GP+ ++ + G K G E A ME ++F Q+HT++ Q +R+ N + PA P A + P + +KRK V ++ ED G+E DG WAP KE+ +T E GT+TE+QK R E E RKA D++ D DR E+K HLLP R A E + F G E DYQGR+WVEPP L+P DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER+ +R Y GH+ AVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QSL+N I ++ RD+FK+ KKVFKGH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S V SCGWDGLIK W+ Sbjct: 6 AYASSDEEEAS----RSTSPRSTDSPSLALP---------VVNSAPFV--ALTDRQEEANKAAFLTAGTQTQLAVNLPVESTLAPYVGPQSSGTMDLALVDPLRAGSGKQVVTGVVEQADMEDFSFEAQYHTYN-QTLSRNPA--------RNRAKGAPPSAPALPGEKLADTIVAPGEENVFTSCNAKKRKNQVVSKERAAAEDFGDEATDGIWAPYKEKGKTLTDAEKGTMTEQQKALREEHQEAKRRKAEAKEEADDEMDFDRMVEKKTGHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRTLKPDNGDHQVFLPKRCVHKWTGHTKGVQAIELFPQYGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSGAVRGINFSNDGRQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFKGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKTTKMIKKLRAHDRGPTMGALWHPLEPSKVISCGWDGLIKYWD 607
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|570937120|gb|ETP02377.1| (hypothetical protein F441_20540 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0 Identity = 299/628 (47.61%), Postives = 387/628 (61.62%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPA-LKTVMNRPGFIPPTSR-ELTTNVKAATLLAPIQGP------EHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFH---AQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEE-EDGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S SD E+ P S++P ST + S+S P VNSAPFV + + N+ F+ S+ L N+ + LAP GP E + + G ++ TG E A ME ++F Q+HT++ ++ AR+ V G PA P I + + +KRK + ++ ED G+E DG WAP K++ +T E GT+ E+QK R E E RKAAK G DE+ D DR E+K +HLLP R A E + F G E DYQGR+WVEPP L+P + DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER +R Y GH+ AVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QSL+N I ++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S + SCGWDGLIK W+ Sbjct: 6 AYAS-SDDETAPL---STSPRSTDAPSLSLP---------VVNSAPFVALSDSQDQANKAAFLSAGSQTRLAVNLPVESTLAPFVGPHGGDSTELALTDPLRAGSGKEMVTG-VVEQAAMEDYSFEAQYHTYNQTLSRNIARNRVKGAPPSA------------PALPGEIVPDNIVATGEEDVFTRRNAKKRKNQTISKERAAAEDFGDEPTDGIWAPYKDKSKHLTDAEQGTMNEQQKALREEHQEAKRRKAAKEEG-DEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 606
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|567975817|gb|ETL26353.1| (hypothetical protein L916_19960 [Phytophthora parasitica]) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 296/628 (47.13%), Postives = 384/628 (61.15%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPA-LKTVMNRPGFIPPTSR-ELTTNVKAATLLAPIQGP------EHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFH---AQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEE-EDGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S SD E+ P S++P ST + S+S P VNSAPFV + + N+ F+ S+ L N+ + LAP GP E + + G ++ TG E A ME ++F Q+HT++ ++ AR+ V G PA P I + + +KRK + ++ ED G+E DG WAP K++ +T E GT+ E+QK R E E RKA DE+ D DR E+K +HLLP R A E + F G E DYQGR+WVEPP L+P + DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER +R Y GH+ AVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QSL+N I ++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S + SCGWDGLIK W+ Sbjct: 6 AYAS-SDDETAPL---STSPRSTDAPSLSLP---------VVNSAPFVALSDSQDQANKAAFLSAGSQTRLAVNLPVESTLAPFVGPHGGDSTELALTDPLRAGNGKEMVTG-VVEQAAMEDYSFEAQYHTYNQTLSRNIARNRVKGAPPSA------------PALPEEIVPDNIVATGEEDVFTRRNAKKRKNQTISKERAAAEDFGDEPTDGIWAPYKDKSKHLTDAEQGTMNEQQKALREEHQEAKRRKAEAKEEGDEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 607
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|567947113|gb|ETK72906.1| (hypothetical protein L915_20087 [Phytophthora parasitica]) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 296/628 (47.13%), Postives = 384/628 (61.15%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPA-LKTVMNRPGFIPPTSR-ELTTNVKAATLLAPIQGP------EHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFH---AQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEE-EDGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S SD E+ P S++P ST + S+S P VNSAPFV + + N+ F+ S+ L N+ + LAP GP E + + G ++ TG E A ME ++F Q+HT++ ++ AR+ V G PA P I + + +KRK + ++ ED G+E DG WAP K++ +T E GT+ E+QK R E E RKA DE+ D DR E+K +HLLP R A E + F G E DYQGR+WVEPP L+P + DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER +R Y GH+ AVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QSL+N I ++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S + SCGWDGLIK W+ Sbjct: 6 AYAS-SDDETAPL---STSPRSTDAPSLSLP---------VVNSAPFVALSDSQDQANKAAFLSAGSQTRLAVNLPVESTLAPFVGPHGGDSTELALTDPLRAGSGKEMVTG-VVEQAAMEDYSFEAQYHTYNQTLSRNIARNRVKGAPPSA------------PALPEEIVPDNIVATGEEDVFTRRNAKKRKNQTISKERAAAEDFGDEPTDGIWAPYKDKSKHLTDAEQGTMNEQQKALREEHQEAKRRKAEAKEEGDEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 607
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|675178147|ref|XP_008897958.1| (hypothetical protein PPTG_05958 [Phytophthora parasitica INRA-310] >gi|568102181|gb|ETN16863.1| hypothetical protein PPTG_05958 [Phytophthora parasitica INRA-310] >gi|970655028|gb|KUF93250.1| Arrestin domain-containing protein A [Phytophthora nicotianae]) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 296/628 (47.13%), Postives = 384/628 (61.15%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFVNPA-LKTVMNRPGFIPPTSR-ELTTNVKAATLLAPIQGP------EHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFH---AQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEEE-DGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S SD E+ P S++P ST + S+S P VNSAPFV + + N+ F+ S+ L N+ + LAP GP E + + G ++ TG E A ME ++F Q+HT++ ++ AR+ V G PA P I + + +KRK + ++ ED G+E DG WAP K++ +T E GT+ E+QK R E E RKA DE+ D DR E+K +HLLP R A E + F G E DYQGR+WVEPP L+P + DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER +R Y GH+ AVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EP MHSMPAVT P+G F A QSL+N I ++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G +WHP+E S + SCGWDGLIK W+ Sbjct: 6 AYAS-SDDETAPL---STSPRSTDAPSLSLP---------VVNSAPFVALSDSQDQANKAAFLSAGSQTRLAINLPVESTLAPFVGPHVGDSTELALTDPLRAGNGKEMVTG-VVEQAAMEDYSFEAQYHTYNQTLSRNIARNRVKGAPPSA------------PALPGEIVPDNIVATGEEDVFTRRNAKKRKNQTISKERAAAEDFGDETTDGIWAPYKDKSKHLTDAEQGTMNEQQKALREEHQEAKRRKAEAKEEGDEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 607
BLAST of EWM29450.1 vs. NCBI_GenBank
Match: gi|301099554|ref|XP_002898868.1| (pre-mRNA-processing factor, putative [Phytophthora infestans T30-4] >gi|262104574|gb|EEY62626.1| pre-mRNA-processing factor, putative [Phytophthora infestans T30-4]) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 295/627 (47.05%), Postives = 380/627 (60.61%), Query Frame = 0 Query: 7 AYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNSAPFV-NPALKTVMNRPGFIPPTS-RELTTNVKAATLLAPIQGPEHPFRREMDSM-----GGTKLATGGYKEDAVMEKWNFHEQFHTFH---AQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKG--VEED----EDLGEEE-DGPWAPAKEEPV-ITQLEAGTLTEEQKRHRAELAE---RKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612 AY S D E+ P S++P ST + S+S P VNSAPFV + + N+ F+ S R L N+ + LAP GP+ E+ M G K G E A ME ++F Q+HTF+ ++ R+ V G PA P I + P + +KRK + ++ ED G+E DG WAP K++ T E + E+QK R E E RKA DE+ D DR ERK +HLLP R A E + F G E DYQGR+WVEPP L+P + DH +LPKRCVH++TGH KGVQAIE FP GHLLLS S+D T ++W VY+ER+ +R Y GH+AAVR INFS DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ F+ S+N + +D SGE+VQEYNHHL AVN+VTF D+N RF STSDDKK+L+WEW I VPIKYI+EPGMH+MPAVT P+G F A QSL+N I ++ RD+FK+ KK F+GH AG+ACQ FSPN +++ SGDG+GKL FWD+K ++ L K AHD GP +G +WHP+E S V SCGWDGLIK W+ Sbjct: 18 AYASSED-ETPP---HSTSPRSTDAPSLSLP---------VVNSAPFVAHSDSQDQANKTAFLSAGSQRRLAVNLPVESTLAPFMGPQSGDSTELALMDPLRAGSGKEVVTGVVEQADMEDYSFEAQYHTFNETLSRNIPRNRVKGAPPSA------------PALPGEIIPDNIVAPDEEDVFTRRNAKKRKNQIISKERAAAEDFGDENSDGIWAPYKDKNKHFTDAELDIMNEQQKALREEHQEAKRRKAEAKSEVDEEMDFDRMVERKTSHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKFGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSAAVRGINFSNDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLKAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPGMHAMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKMNRKKTFRGHQNAGYACQIGFSPNGQFVMSGDGQGKLAFWDWKTSKMLQKLHAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 619 The following BLAST results are available for this feature:
BLAST of EWM29450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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