EWM29468.1, cds1204 (CDS) Nannochloropsis gaditana

Overview
NameEWM29468.1
Unique Namecds1204
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:50832..51050 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29468.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100449g5.9456.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:50832..51050 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29468.1 vs. NCBI_GenBank
Match: gi|585112006|gb|EWM29468.1| (hypothetical protein Naga_100449g5 [Nannochloropsis gaditana])

HSP 1 Score: 149.828 bits (377), Expect = 5.131e-46
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 
Query:    1 MLKWVYTACFYLDAGVVRLCEIMAGMILEKDHARIASLRGPTPSLARKRLRVYVVSPPCRCMTCAMFFFNVR 72
            MLKWVYTACFYLDAGVVRLCEIMAGMILEKDHARIASLRGPTPSLARKRLRVYVVSPPCRCMTCAMFFFNVR
Sbjct:    1 MLKWVYTACFYLDAGVVRLCEIMAGMILEKDHARIASLRGPTPSLARKRLRVYVVSPPCRCMTCAMFFFNVR 72
The following BLAST results are available for this feature:
BLAST of EWM29468.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112006|gb|EWM29468.1|5.131e-46100.00hypothetical protein Naga_100449g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1205rna1205Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications