EWM29483.1, cds1190 (CDS) Nannochloropsis gaditana

Overview
NameEWM29483.1
Unique Namecds1190
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1440327..1440374 -
Alignment locationCM002456.1:1439957..1440133 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29483.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101611g2.5763.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1440327..1440374 -
CM002456.1supercontigCM002456.1:1439957..1440133 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29483.1 vs. NCBI_GenBank
Match: gi|585112028|gb|EWM29483.1| (hypothetical protein Naga_101611g2 [Nannochloropsis gaditana])

HSP 1 Score: 149.058 bits (375), Expect = 1.248e-45
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 
Query:    1 MMLHALALTLPFPPKKGPGKTLSLRTDDPFDGKYYAPEEDEEARGKEREREGRREGGEDCGCDVDGNDLAYPPG 74
            MMLHALALTLPFPPKKGPGKTLSLRTDDPFDGKYYAPEEDEEARGKEREREGRREGGEDCGCDVDGNDLAYPPG
Sbjct:    1 MMLHALALTLPFPPKKGPGKTLSLRTDDPFDGKYYAPEEDEEARGKEREREGRREGGEDCGCDVDGNDLAYPPG 74
The following BLAST results are available for this feature:
BLAST of EWM29483.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112028|gb|EWM29483.1|1.248e-45100.00hypothetical protein Naga_101611g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1191rna1191Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications