EWM29486.1, cds1188 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|585112032|gb|EWM29486.1| (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 725.702 bits (1872), Expect = 0.000e+0 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVYARKGR 359
MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVYARKGR
Sbjct: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVYARKGR 359
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|585112033|gb|EWM29487.1| (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0 Identity = 307/311 (98.71%), Postives = 307/311 (98.71%), Query Frame = 0
Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSL 311
MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFG F L
Sbjct: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFL 311
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|552823602|ref|XP_005846396.1| (hypothetical protein CHLNCDRAFT_135883 [Chlorella variabilis] >gi|307106047|gb|EFN54294.1| hypothetical protein CHLNCDRAFT_135883 [Chlorella variabilis]) HSP 1 Score: 122.479 bits (306), Expect = 3.470e-30 Identity = 69/142 (48.59%), Postives = 84/142 (59.15%), Query Frame = 0
Query: 45 APSLIHRLATSEDDPPPPPTTLVDKLFSLFFG---AKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEG 183
A L R E+D L++ F FG + P G R+S E++ E+YPA T FA+ L GD+ DVA LRPLLAQT+LE PL L YDA +DGW FH++VD GA LVVA T GGAV GGYNP G G+G
Sbjct: 7 ASQLCWRARAQEED-------LIESFFGRLFGRPALDDPTPFGLKRVSEEAAKELYPAVTDTFAESLSGDNEDVAKLRPLLAQTQLESVPLRLAYDADQDGWTPTAFHQRVDGFGAALVVAETVGGAVVGGYNPR-GEMGKG 140
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|1189392206|gb|OSX79122.1| (hypothetical protein BU14_0086s0009, partial [Porphyra umbilicalis]) HSP 1 Score: 123.25 bits (308), Expect = 1.582e-29 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 0
Query: 67 VDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
+++LF+ FFGA EA+PLG R + PE+YPAT + A P+ GD +VA RPLLA+T+L PL L YDA DGW FH VD RGA++V+ART GGAVCGGYNP+
Sbjct: 2 IERLFTFFFGAIEAEPLGLKRFDRDRFPELYPATLTETAPPVDGDGPEVALFRPLLARTQLASRPLRLAYDATVDGWTAEAFHGAVDFRGASVVLARTAGGAVCGGYNPK 111 HSP 2 Score: 77.0258 bits (188), Expect = 1.305e-12 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 0
Query: 249 FPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLT----------TDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVD-LKVY 354
+ P+GW G G+ R I+AFLFTWP G RPIK KVG + AV D P FG + + L DR A SKLG + +LP G LFAP+E ++ L+VY
Sbjct: 108 YNPKGWVGYGEARGSIAAFLFTWPTGDTAGGRPIKLRKVGRGATAVIDTPEDGPTFGADALVVPLQPPRAGWATDERDRVARSKLGSYFERLPNGRNHLFAPTEAGAGVTLEWLRVY 224
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|299470005|emb|CBN79182.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.398 bits (298), Expect = 2.308e-27 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0
Query: 66 LVDKLFSLFFGAKEAKPLG-FARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
+++K FS+FFG K+ P G RI+V+ P+ YPA + A+P+ GDS+D+A +RPLL QT LE L L+YDA R+GWK FH+ VD +G LVV +T+GGAV GGYNP+
Sbjct: 84 VIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPK 195 HSP 2 Score: 77.7962 bits (190), Expect = 1.692e-12 Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 0
Query: 249 FPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLT--TDRKAISKLGLAYAKLPG--GATSLFAPSE-GKMAEIVDLKVY 354
+ P+GW G G+ R +SAFLFTW G R +K K+GGA AV D P FG + F + + ++R SKLG Y +LP G S+FAP + G +AE+VDLK Y
Sbjct: 192 YNPKGWVGYGEYRPGLSAFLFTWRDGDTN-KRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAY 301
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|546327358|ref|XP_005719256.1| (unnamed protein product [Chondrus crispus] >gi|507115925|emb|CDF39345.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 113.62 bits (283), Expect = 2.338e-25 Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 0
Query: 66 LVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
+V+++++ FGAK+A+P G R + PE+YPAT FADP+P D+ ++A RPLLA+T+L+ + L+YDA RDGW FH ++ +GA++V+A T GAV GGYNP+
Sbjct: 66 IVERVYTAIFGAKQAEPFGLKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMAST-AGAVFGGYNPK 175 HSP 2 Score: 72.4034 bits (176), Expect = 1.123e-10 Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 0
Query: 249 FPPQGWEGVGDERQCISAFLFTWPQGKMRASRP-IKCPKVGGASYAVDDNPALAIKFGYEDFSLKL----------TTDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIV-DLKVYA 355
+ P+G+ G G+ R +AFLFTWP G S+P +K KVGGA+ AV D P KFG + + L DR A SKLG Y + P G +LFA E E++ +LKV+A
Sbjct: 172 YNPKGFVGYGESRGSKAAFLFTWPDGD--TSKPAVKLRKVGGAALAVVDEPETGPKFGADSLVVPLRPPRANWGESQKDRIAYSKLGSYYERRPDGGNTLFANGENPKGEVLQELKVFA 288
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|873220311|emb|CEM35929.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 109.383 bits (272), Expect = 5.766e-24 Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = 0
Query: 54 TSEDDPPPPP------------TTLVDKLFSLFFGAK---EAKPLGFARISVESSPEVYPATTSIFADPLPGD--SRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYN 174
+ ED+P PP V K FG+K + +PLGF R E+ PE Y + +AD LP D ++D+ +RPLL QTRLE+ P+ LIYDA R GW FH++VD +G +V+ARTRGG++CGGYN
Sbjct: 18 SDEDEPLGPPGIAPGRKVYEERDDWVTKAVKFVFGSKALQDPEPLGFKRSGKEAFPEYYGVNLAEWADLLPEDQGNKDLTLIRPLLKQTRLEQRPMQLIYDASRHGWSCRSFHQRVDRKGPCVVLARTRGGSICGGYN 155 HSP 2 Score: 84.3445 bits (207), Expect = 6.839e-15 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 0
Query: 253 GWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTD-----RKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVYA 355
GW GVG+ R SAFLFTWP G + RP+K PKVGGA A+ D P + FG + F + L++ + + SKLG Y++ G SLF+ E + AE+V+LKVYA
Sbjct: 158 GWVGVGELRGAASAFLFTWPDGDT-SKRPLKLPKVGGAGVAICDFPDKGVSFGMDGFVVPLSSREPNGPQISYSKLGPYYSRRKDGFPSLFSGVEKRQAELVELKVYA 264
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|1210523285|dbj|GAX17922.1| (hypothetical protein FisN_18Hh130 [Fistulifera solaris]) HSP 1 Score: 107.071 bits (266), Expect = 3.978e-23 Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0
Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIF-ADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
M+ +P+ +++L+ S A VPS P S P+ ++ P LV+K+F++FFG E PLG R PE YPATT+ F +P+ D+ ++A LRPLL +T LEK L L YDA RDGW FH VD +G LV +R G GGYNP+
Sbjct: 1 MFTRIPLVLIILLR-------FSEAFVPSQKQ-PQPSRSRLNFFFPNKNQPEEPAKQVPVEEEPDLVEKIFTVFFGKPEESPLGLKRFDENRFPEQYPATTTDFDVEPVETDNSEMAYLRPLLRKTNLEKRGLRLTYDANRDGWDPVKFHAAVDKQGGGLVYCESRLGIQAGGYNPK 169 HSP 2 Score: 65.4698 bits (158), Expect = 2.287e-8 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 249 FPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTD--RKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVY 354
+ P+GW G G+ R I+AFLF + + +R IK KVGGAS+A DNP FG + + L+ D + A SKLG + ++P G SLF + ++ L+VY
Sbjct: 166 YNPKGWVGYGEARGSIAAFLF-----QRQGNRWIKLKKVGGASFAQVDNPESGPSFGADSLVIPLSKDNPKLARSKLGSYFERMPDGGNSLFG--KDASVQLKTLRVY 266
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|397640225|gb|EJK74003.1| (hypothetical protein THAOC_04348 [Thalassiosira oceanica]) HSP 1 Score: 107.457 bits (267), Expect = 7.803e-23 Identity = 57/129 (44.19%), Postives = 69/129 (53.49%), Query Frame = 0
Query: 68 DKLFSLFFGAKEAKPLGFARISVESS--------------------PEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
D +F +FFG KEAKPLG R E PE YPA +ADP+ D +A LRPLL T LEK L LIYDA +DGW FH KVD +G ++V+ T+ G CGGYNP+
Sbjct: 91 DPIFGVFFGKKEAKPLGMERFGQEVGQGGQAGQASQNSTIAYLARFPEQYPAVLDEWADPVETDDATMALLRPLLKNTNLEKRALTLIYDANKDGWDPAKFHAKVDKQGGSIVLCTTKSGLKCGGYNPK 219
BLAST of EWM29486.1 vs. NCBI_GenBank
Match: gi|1210516293|dbj|GAX24791.1| (hypothetical protein FisN_18Lh130 [Fistulifera solaris]) HSP 1 Score: 106.301 bits (264), Expect = 8.538e-23 Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 66 LVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIF-ADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176
LV+K+F++FFG E PLG R PE YPATT+ F +P+ D+ ++A LRPLL +T LEK L L YDA RDGW FH VD +G LV +R G GGYNP+
Sbjct: 56 LVEKIFTVFFGKPEESPLGLKRFDENRFPEQYPATTTDFDVEPVETDNSEMAYLRPLLRKTNLEKRGLRLTYDANRDGWDPVKFHAAVDKQGGGLVYCESRLGIQAGGYNPK 167 The following BLAST results are available for this feature:
BLAST of EWM29486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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