EWM29487.1, cds1187 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|585112033|gb|EWM29487.1| (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFLGRLLYPLSVLLSLVV 326 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFLGRLLYPLSVLLSLVV Sbjct: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFLGRLLYPLSVLLSLVV 326
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|585112032|gb|EWM29486.1| (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0 Identity = 307/311 (98.71%), Postives = 307/311 (98.71%), Query Frame = 0 Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFL 311 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFG F L Sbjct: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPFLPLSLPPSFPPQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSL 311
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|552823602|ref|XP_005846396.1| (hypothetical protein CHLNCDRAFT_135883 [Chlorella variabilis] >gi|307106047|gb|EFN54294.1| hypothetical protein CHLNCDRAFT_135883 [Chlorella variabilis]) HSP 1 Score: 122.094 bits (305), Expect = 2.133e-30 Identity = 69/142 (48.59%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 45 APSLIHRLATSEDDPPPPPTTLVDKLFSLFFGA---KEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEG 183 A L R E+D L++ F FG + P G R+S E++ E+YPA T FA+ L GD+ DVA LRPLLAQT+LE PL L YDA +DGW FH++VD GA LVVA T GGAV GGYNP G G+G Sbjct: 7 ASQLCWRARAQEED-------LIESFFGRLFGRPALDDPTPFGLKRVSEEAAKELYPAVTDTFAESLSGDNEDVAKLRPLLAQTQLESVPLRLAYDADQDGWTPTAFHQRVDGFGAALVVAETVGGAVVGGYNPR-GEMGKG 140
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|1189392206|gb|OSX79122.1| (hypothetical protein BU14_0086s0009, partial [Porphyra umbilicalis]) HSP 1 Score: 122.865 bits (307), Expect = 1.319e-29 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 0 Query: 67 VDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 +++LF+ FFGA EA+PLG R + PE+YPAT + A P+ GD +VA RPLLA+T+L PL L YDA DGW FH VD RGA++V+ART GGAVCGGYNP+ Sbjct: 2 IERLFTFFFGAIEAEPLGLKRFDRDRFPELYPATLTETAPPVDGDGPEVALFRPLLARTQLASRPLRLAYDATVDGWTAEAFHGAVDFRGASVVLARTAGGAVCGGYNPK 111
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|299470005|emb|CBN79182.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.398 bits (298), Expect = 1.128e-27 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0 Query: 66 LVDKLFSLFFGAKEAKPLG-FARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 +++K FS+FFG K+ P G RI+V+ P+ YPA + A+P+ GDS+D+A +RPLL QT LE L L+YDA R+GWK FH+ VD +G LVV +T+GGAV GGYNP+ Sbjct: 84 VIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPK 195
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|546327358|ref|XP_005719256.1| (unnamed protein product [Chondrus crispus] >gi|507115925|emb|CDF39345.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 113.62 bits (283), Expect = 1.316e-25 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = 0 Query: 49 IHRLATSED-DPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 +H +A + D + +V+++++ FGAK+A+P G R + PE+YPAT FADP+P D+ ++A RPLLA+T+L+ + L+YDA RDGW FH ++ +GA++V+A T GAV GGYNP+ Sbjct: 48 LHPIANARDKESNKGEMDIVERVYTAIFGAKQAEPFGLKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMAST-AGAVFGGYNPK 175
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|873220311|emb|CEM35929.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.997 bits (271), Expect = 4.285e-24 Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 54 TSEDDPPPPP------------TTLVDKLFSLFFGAK---EAKPLGFARISVESSPEVYPATTSIFADPLPGD--SRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYN 174 + ED+P PP V K FG+K + +PLGF R E+ PE Y + +AD LP D ++D+ +RPLL QTRLE+ P+ LIYDA R GW FH++VD +G +V+ARTRGG++CGGYN Sbjct: 18 SDEDEPLGPPGIAPGRKVYEERDDWVTKAVKFVFGSKALQDPEPLGFKRSGKEAFPEYYGVNLAEWADLLPEDQGNKDLTLIRPLLKQTRLEQRPMQLIYDASRHGWSCRSFHQRVDRKGPCVVLARTRGGSICGGYN 155
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|1210523285|dbj|GAX17922.1| (hypothetical protein FisN_18Hh130 [Fistulifera solaris]) HSP 1 Score: 107.071 bits (266), Expect = 2.075e-23 Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0 Query: 1 MWRPVPVFILLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLATSEDDPPPPPTTLVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIF-ADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 M+ +P+ +++L+ S A VPS P S P+ ++ P LV+K+F++FFG E PLG R PE YPATT+ F +P+ D+ ++A LRPLL +T LEK L L YDA RDGW FH VD +G LV +R G GGYNP+ Sbjct: 1 MFTRIPLVLIILLR-------FSEAFVPSQKQ-PQPSRSRLNFFFPNKNQPEEPAKQVPVEEEPDLVEKIFTVFFGKPEESPLGLKRFDENRFPEQYPATTTDFDVEPVETDNSEMAYLRPLLRKTNLEKRGLRLTYDANRDGWDPVKFHAAVDKQGGGLVYCESRLGIQAGGYNPK 169
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|1210516293|dbj|GAX24791.1| (hypothetical protein FisN_18Lh130 [Fistulifera solaris]) HSP 1 Score: 106.301 bits (264), Expect = 3.968e-23 Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 0 Query: 66 LVDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIF-ADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 LV+K+F++FFG E PLG R PE YPATT+ F +P+ D+ ++A LRPLL +T LEK L L YDA RDGW FH VD +G LV +R G GGYNP+ Sbjct: 56 LVEKIFTVFFGKPEESPLGLKRFDENRFPEQYPATTTDFDVEPVETDNSEMAYLRPLLRKTNLEKRGLRLTYDANRDGWDPVKFHAAVDKQGGGLVYCESRLGIQAGGYNPK 167
BLAST of EWM29487.1 vs. NCBI_GenBank
Match: gi|397640225|gb|EJK74003.1| (hypothetical protein THAOC_04348 [Thalassiosira oceanica]) HSP 1 Score: 107.071 bits (266), Expect = 5.117e-23 Identity = 57/129 (44.19%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 68 DKLFSLFFGAKEAKPLGFARISVESS--------------------PEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPE 176 D +F +FFG KEAKPLG R E PE YPA +ADP+ D +A LRPLL T LEK L LIYDA +DGW FH KVD +G ++V+ T+ G CGGYNP+ Sbjct: 91 DPIFGVFFGKKEAKPLGMERFGQEVGQGGQAGQASQNSTIAYLARFPEQYPAVLDEWADPVETDDATMALLRPLLKNTNLEKRALTLIYDANKDGWDPAKFHAKVDKQGGSIVLCTTKSGLKCGGYNPK 219 The following BLAST results are available for this feature:
BLAST of EWM29487.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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