EWM29500.1, cds1179 (CDS) Nannochloropsis gaditana

Overview
NameEWM29500.1
Unique Namecds1179
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1413909..1415654 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29500.1
ProductArmadillo-like helical
Orig transcript idgnl|cribi|Naga_100287g2.6256.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1413909..1415654 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
Homology
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|585112054|gb|EWM29500.1| (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 1145.57 bits (2962), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0
Query:    1 MTFLAVGPFTTVLLHMFLYQAKIRGKTMKPHPPLRKVTPGQRPSFLLCSISLLVFLIVSFAAEQPAAKISPQEEENVFVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIPPSLPPSLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAREVVEEEDWKEGVDREYWEDLVNLIEALLEETREGGRAGGREEL 581
            MTFLAVGPFTTVLLHMFLYQAKIRGKTMKPHPPLRKVTPGQRPSFLLCSISLLVFLIVSFAAEQPAAKISPQEEENVFVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIPPSLPPSLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAREVVEEEDWKEGVDREYWEDLVNLIEALLEETREGGRAGGREEL
Sbjct:    1 MTFLAVGPFTTVLLHMFLYQAKIRGKTMKPHPPLRKVTPGQRPSFLLCSISLLVFLIVSFAAEQPAAKISPQEEENVFVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIPPSLPPSLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAREVVEEEDWKEGVDREYWEDLVNLIEALLEETREGGRAGGREEL 581          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|1072224730|gb|OEU09479.1| (hypothetical protein FRACYDRAFT_264163 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 120.939 bits (302), Expect = 2.068e-25
Identity = 131/567 (23.10%), Postives = 235/567 (41.45%), Query Frame = 0
Query:   63 EQPAAKISPQEEENVFVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKGILDSVV-------IKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEEL---------------GRLIGVLKEGGEE--------EVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGG---------------REVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALT--RLL--TICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIPPSLPPSLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAREVVEEEDW---KEGVDREYWEDLVNLIEALLEETREGGRAGG 577
            ++P++ +S  + + + +AT EWQ +    +VP GLH+++D++TGE+  K+MD  + +      + +E++ L   D     S +        +V+       I+++   + E      +     M + LS LP +E+ S+G+  L    P+  +    ++          +F + +  +W  RQ+ L +  E+M+   E L                +LI +  E  E          ++ AL +LE  L+D+D+A+DF+T+GGWP LV  +  E     G               R VQ  AAW +G AVKN   F ++ +E    G     T   LL  + C+E          E   LL K +YA+ S  RGN   Q ++V+  G + LG   +        S + +  QR A+ L +  F                             S   +++  +TS  +C+   G+L      E       +E VL+A  +L   C +         + + ++   R      DW   KE  D +++++++++    L+  R G  +G 
Sbjct:   20 QRPSSFLSFSDAKEI-IATKEWQLLGVNDTVPAGLHLRMDMTTGEKWAKIMDDDDDEEDDDEQKEQEQNELYYNDDTKINSERRKESASAVAVIEGDEATKIQDSKHNSSEIKYDFDM-----MHRTLSKLPDEEKESIGLPEL----PQPNDDESSKI----------SFQRSMVDIWKLRQERLARTSESMVNFPEVLKARIASIEEYLKDPKTQLISMNLEDDESSSNGNVVTHIVSALKDLEFQLTDLDLARDFHTMGGWPFLVQLVSDESHVPSGNKTINELSPNIQRNIRTVQAYAAWAIGTAVKNTEEFFSYSIEKIVVGDGQITTPIELLIDSFCKEYND---SNSLEIRTLLSKNIYAIGSILRGNIPAQIRVVKTNGFDKLGKKYNELSKEGFNSINTKLIQRLAV-LSIYIFED---------------------------STDTNIVDAITSSDFCDATCGVL----SSENFLPVSVVETVLKAFTVLGPHCQQSSC---AVNDFQSIIESIR-----SDWLKRKEDFDGDHFKEILDVANEALKSIR-GDESGN 522          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|568021826|gb|ETL95909.1| (hypothetical protein L917_06423 [Phytophthora parasitica])

HSP 1 Score: 118.242 bits (295), Expect = 1.183e-24
Identity = 109/381 (28.61%), Postives = 182/381 (47.77%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G   ++      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVSEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|568052191|gb|ETM49073.1| (hypothetical protein L914_06525 [Phytophthora parasitica])

HSP 1 Score: 118.242 bits (295), Expect = 1.205e-24
Identity = 109/381 (28.61%), Postives = 182/381 (47.77%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G   ++      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVSEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|567992570|gb|ETL42760.1| (hypothetical protein L916_06552 [Phytophthora parasitica] >gi|570953944|gb|ETP19201.1| hypothetical protein F441_06744 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 118.242 bits (295), Expect = 1.359e-24
Identity = 109/381 (28.61%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G    +      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVTEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|570330216|gb|ETO78164.1| (hypothetical protein F444_06808 [Phytophthora parasitica P1976])

HSP 1 Score: 118.242 bits (295), Expect = 1.372e-24
Identity = 109/381 (28.61%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G    +      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVTEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|567963813|gb|ETK89306.1| (hypothetical protein L915_06614 [Phytophthora parasitica])

HSP 1 Score: 118.242 bits (295), Expect = 1.385e-24
Identity = 109/381 (28.61%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G    +      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVTEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|566026517|gb|ETI49428.1| (hypothetical protein F443_06741 [Phytophthora parasitica P1569] >gi|570988825|gb|ETP47130.1| hypothetical protein F442_06777 [Phytophthora parasitica P10297])

HSP 1 Score: 118.242 bits (295), Expect = 1.437e-24
Identity = 109/381 (28.61%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G    +      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVTEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFVYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|675166993|ref|XP_008892381.1| (hypothetical protein PPTG_02831 [Phytophthora parasitica INRA-310] >gi|568108559|gb|ETN23183.1| hypothetical protein PPTG_02831 [Phytophthora parasitica INRA-310] >gi|970630397|gb|KUF77357.1| Nucleotide exchange factor SIL1 [Phytophthora nicotianae])

HSP 1 Score: 117.857 bits (294), Expect = 1.666e-24
Identity = 109/381 (28.61%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   78 FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQER--ASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ 446
            FVAT EWQ + PG  VP GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD++G    +      L +V  +   E+T++AS G  ++   +++K     PP E       I  +L + P   +  G ++ E  E+     F +Q+ TLW +RQ  L +A E++   A+ LG+L+   KE    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           ++  AAWVVG+A KN +  Q W ++ G       + +L+   R     +    ++  E+ +KA+YA++S  R N   Q       G E+L  L   + P               L LK++ F  DL  EA +
Sbjct:   55 FVATNEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDISGDIVTEENEDDTL-TVTEEEISEDTVKAS-GEDVA---SVVKEEDEAPPAEPNWNHEKIYDVLQALPEPPKVEGMDIHEAHEKLSPAEFRRQIVTLWKKRQAELKEALESLQDDAKYLGKLLEQFKEAEQKGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIVAEYLN-----STNLPIRASAAWVVGSAAKNYKDGQEWAIDAG------VIPKLVDSLRLELPSSEDAAKDVLEVKKKAIYALSSLVRSNERGQRLFSLHNGPELLAGLFDDAHPAK-------------LQLKVLLFMYDLLAEATE 406          
BLAST of EWM29500.1 vs. NCBI_GenBank
Match: gi|1214707291|gb|OWZ18714.1| (hypothetical protein PHMEG_0007143 [Phytophthora megakarya])

HSP 1 Score: 117.472 bits (293), Expect = 2.342e-24
Identity = 123/443 (27.77%), Postives = 195/443 (44.02%), Query Frame = 0
Query:   63 EQPAAKISPQEEENV---FVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPE---RQALRPA---GQRKEESALQATDVAG-FKSNKTGAKGIL---DSVVIKNTP------EETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEG---GEEEVMRALMELEDW-LSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIPPSLPPSLLAGVTSPAWCE 482
            E+ +  IS  + ++    FVAT EWQ + PG  +P GLHV+L+L TG+R  KL+D  E    +++R        KE +   +TD+ G   + + G + ++   + VV  NT       EET EA    P      +  VL  LP   +                   G ++ E  E+     F KQ+ TLW +RQ  L +A E++   A+ LG+L    K+    G+ E   +++E+ +W + D+D    F  +GG+ ++   L           V+  AAWVVG+A KN +  Q W ++ G       + +L+         + G  ++  E+ +KA+YA++S  R N   Q         EVL  L + + P               L LK++ F  DL  E + A     +     HP  +PP+L   L     S  WCE
Sbjct:   34 EKVSVDISASDSDSTVPEFVATNEWQELLPGQGIPRGLHVRLNLETGKREAKLVDPNEAETEESMRSVVVDPNAKETTVTVSTDITGDIVTEENGDEQLVATNEDVVETNTADAALTEEETDEAPAAEPNWNHEKIYDVLQALPEPPKVE-----------------GMDIHEAHEKLSPAEFRKQIVTLWKKRQAELKEALESLQDDAKYLGKLFEQFKDAEQRGDTEGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIIGEYLN-----STNLPVRASAAWVVGSAAKNYKDGQGWAIDAG------VIPKLVDSLTLEIPSSEGAAKDVLEVKKKAIYALSSLVRSNERGQRLFGLHKAPEVLAGLFNDAHPAK-------------LQLKVLLFVYDLLAEIEDAKRGVDD-----HP--MPPAL-MELEQVFQSTEWCE 427          
The following BLAST results are available for this feature:
BLAST of EWM29500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112054|gb|EWM29500.1|0.000e+0100.00Armadillo-like helical [Nannochloropsis gaditana][more]
gi|1072224730|gb|OEU09479.1|2.068e-2523.10hypothetical protein FRACYDRAFT_264163 [Fragilario... [more]
gi|568021826|gb|ETL95909.1|1.183e-2428.61hypothetical protein L917_06423 [Phytophthora para... [more]
gi|568052191|gb|ETM49073.1|1.205e-2428.61hypothetical protein L914_06525 [Phytophthora para... [more]
gi|567992570|gb|ETL42760.1|1.359e-2428.61hypothetical protein L916_06552 [Phytophthora para... [more]
gi|570330216|gb|ETO78164.1|1.372e-2428.61hypothetical protein F444_06808 [Phytophthora para... [more]
gi|567963813|gb|ETK89306.1|1.385e-2428.61hypothetical protein L915_06614 [Phytophthora para... [more]
gi|566026517|gb|ETI49428.1|1.437e-2428.61hypothetical protein F443_06741 [Phytophthora para... [more]
gi|675166993|ref|XP_008892381.1|1.666e-2428.61hypothetical protein PPTG_02831 [Phytophthora para... [more]
gi|1214707291|gb|OWZ18714.1|2.342e-2427.77hypothetical protein PHMEG_0007143 [Phytophthora m... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1180rna1180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications