EWM29496.1, cds1174 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|585112050|gb|EWM29496.1| (solute carrier family 31 (copper transporters) member 1 [Nannochloropsis gaditana]) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 Query: 1 MRISSHIFVAMRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 265 MRISSHIFVAMRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV Sbjct: 1 MRISSHIFVAMRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 265
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|553190865|ref|XP_005855280.1| (solute carrier family 31 (copper transporters) member 1 [Nannochloropsis gaditana CCMP526] >gi|422293781|gb|EKU21081.1| solute carrier family 31 (copper transporters) member 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 Query: 11 MRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 265 MRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV Sbjct: 1 MRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMPGMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 255
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|585112051|gb|EWM29497.1| (solute carrier family 31 (copper transporters) member 1 [Nannochloropsis gaditana]) HSP 1 Score: 367.081 bits (941), Expect = 1.250e-126 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 Query: 87 QDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 265 QDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV Sbjct: 29 QDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGTQNSGDKV 207
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|167520778|ref|XP_001744728.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163777059|gb|EDQ90677.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 92.4337 bits (228), Expect = 1.354e-19 Identity = 65/167 (38.92%), Postives = 86/167 (51.50%), Query Frame = 0 Query: 67 SGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWE-------AYRVANKKQLPSAIGAI 226 S GFC G G VMN+GF P +C ++LF V++TAGKYA ALIGTF + E R W R R E + T P +L AL +G+HM AY +MLLVMLYE F+ ++LGLA G F + AY+ + ++ PSA+ I Sbjct: 11 SNGFCSGSGMVMNDGFGRAPS--FCPIFLFHNVVIDTAGKYAIALIGTFCMGLFNELFR----WYRNR----------LEAQESTRP-----ILQDLCVALSYGIHMLNAYFLMLLVMLYESLFFVMIILGLATGSFVVRQLQRHVRKVGAYQDLDGRK-PSALTPI 155
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|298710761|emb|CBJ32181.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.7373 bits (221), Expect = 2.028e-18 Identity = 61/174 (35.06%), Postives = 84/174 (48.28%), Query Frame = 0 Query: 70 FCQGEGSVMNNGFVFMPQDGY-CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWE------AYRVANKKQLPSAIGAIGGGCGCVDEV 236 FC G+G+VM GF CIL+LF+GA V+T KYA A +G FF+ F+ E +R+ R M K +V L+ F V +++AY++MLLVMLYE+ I I ++ GLA G+ W A R A K P +G+ G C D V Sbjct: 26 FCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRM------------AKTSDVSLASDLKMTAA--------FAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTV 179
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|298704943|emb|CBJ28446.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 86.2705 bits (212), Expect = 8.264e-17 Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = 0 Query: 64 MGDSGGFCQGEGSVMNNGF-VFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYF-TFEMWEAYRVANKKQLPSAIGAIGGGCG 231 MGD FC+G+G+VM GF CIL+LF+GA V+T KYA A +G F + F+ E +R+ R M K V G ++A F V MF+AY++MLLVMLYE+ I I ++ GLAAG+ T + R A K + G G Sbjct: 49 MGDQ--FCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRM------------AKASGVCVGSDVKAT--------FAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSG 196
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|325188848|emb|CCA23376.1| (alpha putative [Albugo laibachii Nc14]) HSP 1 Score: 81.6481 bits (200), Expect = 7.851e-14 Identity = 53/149 (35.57%), Postives = 70/149 (46.98%), Query Frame = 0 Query: 62 GGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEAL----RHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFE 206 G D FC GEGSVM NGF + G C+ F V+NT KYA G F +A E L FR MR T L K+G +VT L+ + M +AY ML+VM+YE +FI+L++G G+ F+ Sbjct: 208 GDGSDPATFCTGEGSVMFNGFQ-LSASGSCVRLFFTSWVLNTEIKYALGFAGVFLIAVFNEFLATFRERFRQKMRESPGTNRLDQMGKKGMLVT----------------LYMIQMTIAYFAMLVVMIYETGLFIALMMGFCTGFLLFK 339
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|695408187|ref|XP_009524573.1| (hypothetical protein PHYSODRAFT_313872 [Phytophthora sojae] >gi|348682040|gb|EGZ21856.1| hypothetical protein PHYSODRAFT_313872 [Phytophthora sojae]) HSP 1 Score: 79.337 bits (194), Expect = 2.877e-13 Identity = 59/171 (34.50%), Postives = 82/171 (47.95%), Query Frame = 0 Query: 70 FCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWE--------AYRVANKKQLPSAIGAIGGGCGC 232 FC G+GSVM NGF +G C++ +FQ V+NTA KYA IG F LA E L R +R + K ++ L + L A+L+ V M VAY ML+VM YE +FI+LL G AG+ F+ + A+R N + +G + C Sbjct: 197 FCTGQGSVMFNGFQ-TSINGSCVMLIFQPWVLNTAVKYAFGFIGCFLLAVMNELLAKARELVRKKLL--------KARKLRPTDKLHKMQCKLVL-AVLYMVQMTVAYFAMLIVMTYETGLFIALLAGFGAGFMLFKNVDLDIMEERGAWRFTNPSTVRIEVGGMTCKTNC 357
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|635365373|emb|CCI46245.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 78.1814 bits (191), Expect = 7.276e-13 Identity = 67/197 (34.01%), Postives = 93/197 (47.21%), Query Frame = 0 Query: 26 FVLGSICRGKHGHQGRTAKMDMDMPGMDM----DMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWEAYRVANKKQ 218 V +IC+ T K D+ D D + G + GFC G+GSVM NGF + G CI F V+N+ KYA IG F +A E L R +LRR V+ G+K L + + A L+ + M VAYL ML+VM YE +FI+L+LG AG+ F+ + V NK++ Sbjct: 171 LVQTAICKDTQCADLNTIK-DLSQASKDFVSKYDAVAL-AGTPSEPEGFCTGKGSVMLNGFQSSVK-GSCIRLFFYPWVLNSQVKYAFGFIGIFLMAVGNEYLAKVR--EQLRRN--VMRKGKKRN-------LTYRRKWTLVLASLYMIQMVVAYLAMLVVMTYETGLFIALILGFGAGFLLFKNID-LDVVNKQE 352
BLAST of EWM29496.1 vs. NCBI_GenBank
Match: gi|1214691095|gb|OWZ06116.1| (Alpha kinase, partial [Phytophthora megakarya]) HSP 1 Score: 77.0258 bits (188), Expect = 1.716e-12 Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 68 GGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMWE 209 GFC G+GSVM NGF G C++ LFQ V+N+ KYA IG F +A E+L R +R R ++ A + + +A + A+L+ + M +AY ML+VM YE +F++L++G AG+ F+ E Sbjct: 222 SGFCSGQGSVMFNGFQSSVH-GSCVMLLFQPWVLNSGVKYAFGFIGCFLIALLNESLVKGREVVRQR---LLTARKLRPHDKFHKMQCKATL------AVLYMIQMTIAYFAMLVVMTYETGLFVALIIGFGAGFLLFKNLE 353 The following BLAST results are available for this feature:
BLAST of EWM29496.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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