EWM29493.1, cds1172 (CDS) Nannochloropsis gaditana

Overview
NameEWM29493.1
Unique Namecds1172
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1398949..1399485 +

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Properties
Property NameValue
Start range1398949
Start range.
Protein idEWM29493.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100287g9.6249.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1398949..1399485 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29493.1 vs. NCBI_GenBank
Match: gi|585112047|gb|EWM29493.1| (hypothetical protein Naga_100287g9, partial [Nannochloropsis gaditana])

HSP 1 Score: 351.673 bits (901), Expect = 1.885e-122
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 
Query:    1 GRQEEGDAGKTSKEGTVALDKVRADQSTYYYLVRMLVRAKRVLPAFELVKAMLRPAPSSTPPDHAASLPPSLPPSLPPSLPPPNAETLGVLMEALGRRGEVEPALYLLEVMVEDLKYTPREWFLTPLRRIMISQGLSHPLMPPDPRAWLREGLQIRRRVDKGGRSLRQLIKSSMRAGQ 178
            GRQEEGDAGKTSKEGTVALDKVRADQSTYYYLVRMLVRAKRVLPAFELVKAMLRPAPSSTPPDHAASLPPSLPPSLPPSLPPPNAETLGVLMEALGRRGEVEPALYLLEVMVEDLKYTPREWFLTPLRRIMISQGLSHPLMPPDPRAWLREGLQIRRRVDKGGRSLRQLIKSSMRAGQ
Sbjct:    1 GRQEEGDAGKTSKEGTVALDKVRADQSTYYYLVRMLVRAKRVLPAFELVKAMLRPAPSSTPPDHAASLPPSLPPSLPPSLPPPNAETLGVLMEALGRRGEVEPALYLLEVMVEDLKYTPREWFLTPLRRIMISQGLSHPLMPPDPRAWLREGLQIRRRVDKGGRSLRQLIKSSMRAGQ 178
The following BLAST results are available for this feature:
BLAST of EWM29493.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112047|gb|EWM29493.1|1.885e-122100.00hypothetical protein Naga_100287g9, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1173rna1173Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications