EWM30594.1, cds117 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|585113261|gb|EWM30594.1| (hypothetical protein Naga_100033g43 [Nannochloropsis gaditana]) HSP 1 Score: 1102.81 bits (2851), Expect = 0.000e+0 Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0
Query: 1 MIADGKRRDIIALPLHSLNITPPTTCSYPTANAPGKAMEGAEDPTLGDIVASVMLFDRQTSVKHNSRGNARLAEAASENDFQKGAQKAVEAIAAPKLPKAKKGASVKISCDGSAVDKDRGVDGGDGGEGSVRPTKSKLACKISPEEAPNLKNATTLRRIEAFPTMKEPLVSSVDHGTALVAAVSRHRTPLGTAVPPDDDSNEKRASTCLCGAHATVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADPGEAGKRAVKGPEFFVPQADIPVSSGAEAARGSARRPRNPRAEPEEQTEQGEKQAEKQEKERRGKEDARGEDWTTSGTKPAKGRGRADGTGPSGQKRSLVQANQPQATSHPATKARGPMHKSESRKMAPPPPQGGGSGTCMTSKGDPSAVAERAASSSPPRDASVQADAPIHPQARQERGVQDVGEAVPSEHAAVPPPAADTRFLDFKRKLSQAVIENVGGLDQISLEQLKGAVVGEGQGCFSGEEMDTFLQRLEADNHLMLVDQTVYIV 541
MIADGKRRDIIALPLHSLNITPPTTCSYPTANAPGKAMEGAEDPTLGDIVASVMLFDRQTSVKHNSRGNARLAEAASENDFQKGAQKAVEAIAAPKLPKAKKGASVKISCDGSAVDKDRGVDGGDGGEGSVRPTKSKLACKISPEEAPNLKNATTLRRIEAFPTMKEPLVSSVDHGTALVAAVSRHRTPLGTAVPPDDDSNEKRASTCLCGAHATVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADPGEAGKRAVKGPEFFVPQADIPVSSGAEAARGSARRPRNPRAEPEEQTEQGEKQAEKQEKERRGKEDARGEDWTTSGTKPAKGRGRADGTGPSGQKRSLVQANQPQATSHPATKARGPMHKSESRKMAPPPPQGGGSGTCMTSKGDPSAVAERAASSSPPRDASVQADAPIHPQARQERGVQDVGEAVPSEHAAVPPPAADTRFLDFKRKLSQAVIENVGGLDQISLEQLKGAVVGEGQGCFSGEEMDTFLQRLEADNHLMLVDQTVYIV
Sbjct: 1 MIADGKRRDIIALPLHSLNITPPTTCSYPTANAPGKAMEGAEDPTLGDIVASVMLFDRQTSVKHNSRGNARLAEAASENDFQKGAQKAVEAIAAPKLPKAKKGASVKISCDGSAVDKDRGVDGGDGGEGSVRPTKSKLACKISPEEAPNLKNATTLRRIEAFPTMKEPLVSSVDHGTALVAAVSRHRTPLGTAVPPDDDSNEKRASTCLCGAHATVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADPGEAGKRAVKGPEFFVPQADIPVSSGAEAARGSARRPRNPRAEPEEQTEQGEKQAEKQEKERRGKEDARGEDWTTSGTKPAKGRGRADGTGPSGQKRSLVQANQPQATSHPATKARGPMHKSESRKMAPPPPQGGGSGTCMTSKGDPSAVAERAASSSPPRDASVQADAPIHPQARQERGVQDVGEAVPSEHAAVPPPAADTRFLDFKRKLSQAVIENVGGLDQISLEQLKGAVVGEGQGCFSGEEMDTFLQRLEADNHLMLVDQTVYIV 541
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|813171852|ref|XP_012204681.1| (hypothetical protein SPRG_10145 [Saprolegnia parasitica CBS 223.65] >gi|641530491|gb|KDO24613.1| hypothetical protein SPRG_10145 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 70.8626 bits (172), Expect = 4.034e-9 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 216 VTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADPGEAGKR 278
V V RTW G+NK GG GR+T N DG+ NVKY+LGG ++ V R +I AVA A P +A KR
Sbjct: 997 VHVLPRTWAGMNKLGGTGRITSLNDDGSVNVKYVLGGQDKNVRREFITSPAVAIATPDDANKR 1059
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|298706998|emb|CBJ29806.1| (hypothetical protein Esi_0162_0021 [Ectocarpus siliculosus]) HSP 1 Score: 68.5514 bits (166), Expect = 1.654e-8 Identity = 35/74 (47.30%), Postives = 42/74 (56.76%), Query Frame = 0
Query: 208 CLC-----GAHATVTVEARTWTGINKQGGVGRLTKDN-------GD----GTFNVKYLLGGSERRVDRCYIQCN 265
C+C GAH TV VE R W G NK GG+GR+TK G+ F++KYLLGGSE+RV YI C
Sbjct: 315 CMCPQGTDGAHKTVDVERRCWPGSNKPGGIGRITKKYTAEEEVCGEMVQMSYFDIKYLLGGSEKRVQETYISCT 388
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|1072231196|gb|OEU15929.1| (hypothetical protein FRACYDRAFT_240624 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.5514 bits (166), Expect = 2.223e-8 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 206 STCLCGAHATVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYI 262
+T + V V +RTW G+NK GGVGR+T N DGT+NV Y+LGG E V+ C++
Sbjct: 1026 TTAIWSKGTIVNVASRTWPGVNKHGGVGRITAMNTDGTYNVSYVLGGKESNVEVCFM 1082
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|1173956957|gb|OQS03604.1| (hypothetical protein THRCLA_04076 [Thraustotheca clavata]) HSP 1 Score: 67.781 bits (164), Expect = 2.537e-8 Identity = 37/79 (46.84%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 198 DDSNEKRASTCLCGAHATVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADPGEAG 276
D SNE +A+ G V V ARTW GINK GG + + N DGT+NVKY+LGG E VD YI ++ G D A
Sbjct: 136 DTSNENKAAIEFTGGQV-VQVAARTWPGINKLGGTAWIVERNEDGTYNVKYVLGGRESHVDPAYI---SLVGQDCANAS 210
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|1173951283|gb|OQR99182.1| (hypothetical protein ACHHYP_07214 [Achlya hypogyna]) HSP 1 Score: 66.6254 bits (161), Expect = 6.564e-8 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0
Query: 215 TVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQCNAVAGADP 272
V V ARTW GINK GG G + N DGT+NVKY+LGG E +D YI A + + P
Sbjct: 157 VVQVSARTWPGINKLGGTGWIVGRNDDGTYNVKYVLGGKENHIDPMYISVEAESNSSP 214
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|669145158|ref|XP_008608141.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530740307|gb|EQC38549.1| hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 65.4698 bits (158), Expect = 7.891e-8 Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query: 215 TVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQ 263
V V ARTW GINK GG + + N DGT+NVKY+LGG E RVD YI+
Sbjct: 161 VVEVSARTWPGINKLGGTAWIVRRNDDGTYNVKYVLGGREGRVDPVYIR 209
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|813156258|ref|XP_012201478.1| (hypothetical protein SPRG_07296 [Saprolegnia parasitica CBS 223.65] >gi|641533693|gb|KDO27666.1| hypothetical protein SPRG_07296 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 65.855 bits (159), Expect = 9.365e-8 Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query: 215 TVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQ 263
V V ARTW GINK GG + + N DGT+NVKY+LGG E RVD YI+
Sbjct: 159 VVEVSARTWPGINKLGGTAWIVRRNDDGTYNVKYVLGGREGRVDPAYIR 207
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|669145156|ref|XP_008608140.1| (hypothetical protein SDRG_04254 [Saprolegnia diclina VS20] >gi|530740306|gb|EQC38548.1| hypothetical protein SDRG_04254 [Saprolegnia diclina VS20]) HSP 1 Score: 65.855 bits (159), Expect = 9.977e-8 Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query: 215 TVTVEARTWTGINKQGGVGRLTKDNGDGTFNVKYLLGGSERRVDRCYIQ 263
V V ARTW GINK GG + + N DGT+NVKY+LGG E RVD YI+
Sbjct: 161 VVEVSARTWPGINKLGGTAWIVRRNDDGTYNVKYVLGGREGRVDPVYIR 209
BLAST of EWM30594.1 vs. NCBI_GenBank
Match: gi|397622874|gb|EJK66816.1| (hypothetical protein THAOC_12222, partial [Thalassiosira oceanica]) HSP 1 Score: 64.3142 bits (155), Expect = 3.798e-7 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 214 ATVTVEARTWTGINKQGGVGRLTK-----DNGDGTFNVKYLLGGSERRVDRCYIQCN 265
+ V V++RTW GINK GGVGR+T+ D+ +++KY+LGGSE+ VD CY+ N
Sbjct: 197 SIVCVQSRTWPGINKPGGVGRVTRVHAANDSNVIKYDIKYILGGSEKNVDACYVTLN 253 The following BLAST results are available for this feature:
BLAST of EWM30594.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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