EWM29504.1, cds1168 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|585112062|gb|EWM29504.1| (hypothetical protein Naga_100601g2 [Nannochloropsis gaditana]) HSP 1 Score: 960.674 bits (2482), Expect = 0.000e+0 Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0 Query: 1 MSDSFGTCTRQSSTRKPPPAMSRKGEVSHYNRQRRRLRWLVSGSLVTLLLTLNIISLRGRRSDVMASIETASNNEHLALPSSAVSDSKILSDDLPQERDMLIRGVSIEKSTTPESRPSPESSFGSQEDLELALRITKEKILHEKVERQKQPKRNEQNEENDPANSIQTANSKEKASLLGPFEAEGGNPAIPLLQPAGEKATRPPISGRPPLHRPASETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQVRHMSGAWRMF 465 MSDSFGTCTRQSSTRKPPPAMSRKGEVSHYNRQRRRLRWLVSGSLVTLLLTLNIISLRGRRSDVMASIETASNNEHLALPSSAVSDSKILSDDLPQERDMLIRGVSIEKSTTPESRPSPESSFGSQEDLELALRITKEKILHEKVERQKQPKRNEQNEENDPANSIQTANSKEKASLLGPFEAEGGNPAIPLLQPAGEKATRPPISGRPPLHRPASETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQVRHMSGAWRMF Sbjct: 1 MSDSFGTCTRQSSTRKPPPAMSRKGEVSHYNRQRRRLRWLVSGSLVTLLLTLNIISLRGRRSDVMASIETASNNEHLALPSSAVSDSKILSDDLPQERDMLIRGVSIEKSTTPESRPSPESSFGSQEDLELALRITKEKILHEKVERQKQPKRNEQNEENDPANSIQTANSKEKASLLGPFEAEGGNPAIPLLQPAGEKATRPPISGRPPLHRPASETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQVRHMSGAWRMF 465
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|585109704|gb|EWM27449.1| (hypothetical protein Naga_100107g10 [Nannochloropsis gaditana]) HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0 Identity = 298/451 (66.08%), Postives = 349/451 (77.38%), Query Frame = 0 Query: 1 MSDSFGTCTRQSSTRKPPPAMSRKGE----VSHYNRQRRRLRWLVSGSLVTLLLTLNIISLRGRRSDVMASIETASNNEHLALPSSAVSDSKILSDDLPQERDMLIRGVSIEKSTTPESRPSPESSFGSQEDLELALRITKEKILHEKVERQKQPKRNEQNEENDPANSIQTANSKEKASLLGPFEAEGGNPAIPLLQPAGEKATRPPISGRPPLHRPASETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVE 447 M +S GT TR S KP P +RK + +++ NR +RLRWL+ G L+T+LL LNI+SLRGRRSD ++ + SNNE+LA+P A+ K +SDD P+ ++M ++ + E TTP + S E+S GSQE LELA R T E H K ERQKQ + ++++E D +N I+ S EKAS++ EAE NPAIPLLQPAG+KA R PISGRPPLHRPASETH+QKI+LTISS DRG+RIS LWAGDKL TI +TLVSVRE CERGFDLTVWFIAAWKISQ ++IEEALFCQR +PV IRYWDHF PD+ LSSRHRLAMA+V+DEYDFFISIEDDIYLTP MVDAYVHAS RLAL TDA AREH MVGFSRKEHDLL EDRAWALWETLA +Y L++PGAGWWAQV GN HQ MWMATREQIYNFESRC+ GFL L +P EA WVE Sbjct: 1 MRNSSGTGTRHLSACKPAPPTTRKDKDFTLINYCNRPHKRLRWLIVGVLITVLLILNIVSLRGRRSDPISLVGQLSNNEYLAMPLPALPHGKAVSDDPPRRQEMSLQDFAKESLTTPLIQTSSENSIGSQEHLELASRDTNENASHTKEERQKQRESDKEDENRDSSNLIEMTTSDEKASIVQLVEAEERNPAIPLLQPAGDKAIRHPISGRPPLHRPASETHIQKIMLTISSFDRGQRISHLWAGDKLQTIQETLVSVREFCERGFDLTVWFIAAWKISQHEKIIEEALFCQRIHKPVHIRYWDHFSPDIRSLLSSRHRLAMAEVIDEYDFFISIEDDIYLTPLMVDAYVHASSRLALATDADAREHFMVGFSRKEHDLLSEDRAWALWETLAEEYSALEIPGAGWWAQVKGNRHQGMWMATREQIYNFESRCDGGFLNLTNPNEAGWVE 451
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|553190856|ref|XP_005855277.1| (hypothetical protein NGA_0073800, partial [Nannochloropsis gaditana CCMP526] >gi|422293778|gb|EKU21078.1| hypothetical protein NGA_0073800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 461.84 bits (1187), Expect = 1.433e-159 Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 0 Query: 232 RGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSG 451 RGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVE G Sbjct: 1 RGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLREDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEIFMG 220
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|298715762|emb|CBJ28240.1| (hypothetical protein Esi_0097_0005 [Ectocarpus siliculosus]) HSP 1 Score: 120.553 bits (301), Expect = 1.823e-25 Identity = 83/270 (30.74%), Postives = 122/270 (45.19%), Query Frame = 0 Query: 222 KIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLT----------PSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLLRE--------DRAWALWETLAVDYHVLQLPGAGWWAQVT-------GNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQV-RHMSGAWRMF 465 +I+ ++S DRG R+ + DKL IL + +RE CE GF TV IAAW++S + + LFC+RT V H P +G LS +HR+ M ++E+D FI +EDD+ +T ++D H+ G T + GF R EH E W WE + ++L AG + + G +Q MWMATREQ+ + +L VE HSG+LQ+ R G ++F Sbjct: 395 RILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEIREACEAGFSPTVHLIAAWELSGVEVFVRDRLFCRRTGAHVPYSLEVH-PSSIGNDLSIKHRIFMKPRLEEFDLFIQVEDDVIVTLNHMLLFREESELLDGRRHSDGAPLANT-------AVPGFIRVEHAAEEEGTIAGPSSGEEWQEWEVMLSRLRPVKLEEAGIFLTLGPSLPVPRGGNNQGMWMATREQLRKLSEKKSCDYLNFDESSTKGHVETHSGSLQMFRPNCGLQKVF 656
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|299471666|emb|CBN76888.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.923 bits (276), Expect = 2.468e-22 Identity = 79/261 (30.27%), Postives = 127/261 (48.66%), Query Frame = 0 Query: 215 ASETHVQKIILTISSIDRGERISDLWAG--DKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYV----HASGRLALTTDAYAREHHMVGFSRKEHDLLRE------DRAWALWETLAVDYHVLQLPGAGWWAQVT--------GNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQV 455 A+ +I+ ISS DR +R+ + G DKL IL + ++E CE GF V IAAW S+ +LI + LFCQRT E V +H PP V L+ +HR+ M ++++D F+ +EDD+ +T + + Y + RL + + GF R E ++ + W WE + + +++ GAG + ++ GN +Q MWMATREQ+ + +L+ E HSG++Q+ Sbjct: 368 ATGGESGRILYVISSYDRRKRLGLGYDGKVDKLDYILMMMDEMKEACEGGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGELVPYSSEEH-PPSVRNNLAIKHRIYMKPRVEDFDVFMQVEDDMIVTLNHILLYREECDNLEKRLGMGGSRGRPNVFVPGFLRVEPGGTKDKEKDKWEGEWFEWEIVLSRLNPIKIYGAGTYMSLSPSKVLPRAGN-NQGMWMATREQLKKMAANQACNYLEFDESSANGIPEMHSGSIQM 626
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|298715437|emb|CBJ28048.1| (hypothetical protein Esi_0089_0116 [Ectocarpus siliculosus]) HSP 1 Score: 100.908 bits (250), Expect = 1.464e-19 Identity = 77/257 (29.96%), Postives = 124/257 (48.25%), Query Frame = 0 Query: 215 ASETHVQKIILTISSIDRGERISDLWAG-DKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTT-----DAYAREHHMVGFSRKEHD--LLREDRAWALWETLAVDYHVLQLPGAGWWAQV--------TGNPHQAMWMATREQIYNFESRCESGFLKLKHPREAEWVEFHSGALQV 455 A+ I+ ++S DRG R+ G DKL +L + +R CE GF V I+AW+ + EL + L C+R PV + +H PP + LS +HR+ M + EYD F+ +EDD+ LT + + Y+ S +L+L A +M GF R E + W WE + + + + GAG + + +GN +Q WMAT+EQ+ +C+ +L+ +VE SG+L++ Sbjct: 77 ATTVEAPSILFVVTSFDRGRRLGRRGKGVDKLNYVLMIMDEIRGACEAGFSPHVHLISAWEAQPEVELFTDRLLCRRIGGPVTLTLEEH-PPSIKEALSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILKYLEESEKLSLRNIGTRPRAMPMHDYMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPFSGN-NQGFWMATQEQLKYLCRQCQ--YLRYTGQSSVPFVEKFSGSLEM 329
BLAST of EWM29504.1 vs. NCBI_GenBank
Match: gi|551579173|ref|XP_005775145.1| (hypothetical protein EMIHUDRAFT_195038 [Emiliania huxleyi CCMP1516] >gi|485627089|gb|EOD22716.1| hypothetical protein EMIHUDRAFT_195038 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0182 bits (175), Expect = 4.609e-10 Identity = 65/238 (27.31%), Postives = 101/238 (42.44%), Query Frame = 0 Query: 216 SETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAW-KISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKVMDEYDFFISIEDDIYLTPSMVDAYVHASGRLALTTDAYAREHHMVGFSRKEHDLL----------------------REDRAWALWETLAVDYHVLQLPGAGWWAQVTGNPHQAMWMATREQIYNFESRC 430 S T ++I+ I+ D +L+ L R++CE GF L V + A ++ + ++ AL C +++ PP L+ HR M +D +D FI EDDI LT + + A++ + RLA +MVGF R E LL R +R +WE HVL+L G ++ T H MW+A R+Q+ + +SRC Sbjct: 2 SATARERILYCIAVYD----------NSQLIYTRTMLDGARDMCEAGFRLRVVLLTAHPELLTPLDDLKAALSCANRDGALELELAVR-PPATKKALTLEHRRLMWDRLDAHDLFIYAEDDIGLTLAHLSAWLSETRRLAT-------RRYMVGFMRYERALLFGPTLNGRGGIAYDAGRLQHGARSER--VVWEHAPASLHVLRLGGELYYQPET--VHHGMWIANRKQLLSIQSRC 217 The following BLAST results are available for this feature:
BLAST of EWM29504.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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