EWM29508.1, cds1165 (CDS) Nannochloropsis gaditana

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|585112070|gb|EWM29508.1| (rna polymerase ii core subunit, partial [Nannochloropsis gaditana])

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0

Query:    1 PSLLSQIPPYLLLSLPSLLPSLPLSLSSLAVQNCSKLLSSIPPPLPPSLHLFLSCLLPLVLLPILPPSLFCFPPSLVACRLSAHAQIPLPSLPPSLPPSSDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDERENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIARTGVV 267
            PSLLSQIPPYLLLSLPSLLPSLPLSLSSLAVQNCSKLLSSIPPPLPPSLHLFLSCLLPLVLLPILPPSLFCFPPSLVACRLSAHAQIPLPSLPPSLPPSSDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDERENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIARTGVV
Sbjct:    1 PSLLSQIPPYLLLSLPSLLPSLPLSLSSLAVQNCSKLLSSIPPPLPPSLHLFLSCLLPLVLLPILPPSLFCFPPSLVACRLSAHAQIPLPSLPPSLPPSSDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDERENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIARTGVV 267          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|675196679|ref|XP_008907224.1| (hypothetical protein PPTG_13362 [Phytophthora parasitica INRA-310] >gi|566021097|gb|ETI44008.1| hypothetical protein F443_11228 [Phytophthora parasitica P1569] >gi|567958451|gb|ETK84040.1| hypothetical protein L915_10940 [Phytophthora parasitica] >gi|567987163|gb|ETL37475.1| hypothetical protein L916_10838 [Phytophthora parasitica] >gi|568016430|gb|ETL90607.1| hypothetical protein L917_10744 [Phytophthora parasitica] >gi|568046806|gb|ETM43911.1| hypothetical protein L914_10780 [Phytophthora parasitica] >gi|568092662|gb|ETN07467.1| hypothetical protein PPTG_13362 [Phytophthora parasitica INRA-310] >gi|570324749|gb|ETO72697.1| hypothetical protein F444_11282 [Phytophthora parasitica P1976] >gi|570948574|gb|ETP13831.1| hypothetical protein F441_11142 [Phytophthora parasitica CJ01A1] >gi|570981482|gb|ETP41884.1| hypothetical protein F442_11133 [Phytophthora parasitica P10297])

HSP 1 Score: 152.91 bits (385), Expect = 5.500e-41
Identity = 75/159 (47.17%), Postives = 104/159 (65.41%), Query Frame = 0

Query:  106 GISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDER-ENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            G+ I  LGP Q +RL+AIAK GIGKEHAKWSP AVATY  DP+ITLN+      S  QK +L   CPT+V+  DE  E  TV    +C+YC EC  LA + K +P+DD  V +   E++F+F+VETTG L   EVV  AL+++  K++ ++ Q + +++
Sbjct:  148 GVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSTYSPEQKAELYKSCPTEVYETDENYEQFTVGDAMRCMYCDECVKLADSFKDNPEDDSAVTIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|698812760|ref|XP_009839409.1| (hypothetical protein H257_13554 [Aphanomyces astaci] >gi|574105640|gb|ETV71163.1| hypothetical protein H257_13554 [Aphanomyces astaci])

HSP 1 Score: 148.288 bits (373), Expect = 2.662e-39
Identity = 76/184 (41.30%), Postives = 114/184 (61.96%), Query Frame = 0

Query:   89 LPSLPPSLPP--------SSDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDE-RENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            L SL P + P        +++    G+ I  LGP Q ++L AIAK GIGKEHAKWSP AVATY  +P+ITLN+      +  Q+ +L   CPT+VF +D+  + + V    +C+YC EC  LA + + +P+DD  V VTA +++F+F+VETTG L   EVV  AL+I+  K+  ++ Q + +++
Sbjct:  123 LRSLDPYIKPVHFSSEEEANNTQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|673031344|ref|XP_008869633.1| (hypothetical protein H310_06366 [Aphanomyces invadans] >gi|574474784|gb|ETW01785.1| hypothetical protein H310_06366 [Aphanomyces invadans])

HSP 1 Score: 146.747 bits (369), Expect = 1.368e-38
Identity = 75/183 (40.98%), Postives = 112/183 (61.20%), Query Frame = 0

Query:   89 LPSLPPSLPP--------SSDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDE-RENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIA 262
            L SL P + P        +++    G+ I  LGP Q ++L AIAK GIGKEHAKWSP AVATY  +P+ITLN+      +  Q+ +L   CPT+VF +D+  + + V    +C+YC EC  LA + + +P+DD  V V A +++F+F+VETTG L   EVV  AL+I+  K+  ++ Q + ++
Sbjct:  123 LRSLDPYIKPVHFSSEEEANNTQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLSTYTSEQRVELYKSCPTRVFEIDDTYDTIQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVKATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELS 305          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|635370629|emb|CCI41220.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 146.362 bits (368), Expect = 1.777e-38
Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 0

Query:  100 SDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDER-ENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            ++    G+ I  LGP Q IRL+AIAK GIGKEHAKWSP AVAT+  +P ITLN+      +  QK +L   CPT+V+  DE  E  T+A   +C+YC EC  +A + K +P+DD  V V   E++F+F+VETTG L   EVV  AL+++  K++ ++ Q + +++
Sbjct:  142 NNTQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|325182041|emb|CCA16494.1| (DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14])

HSP 1 Score: 145.591 bits (366), Expect = 3.396e-38
Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 0

Query:  100 SDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDER-ENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            ++    G+ I  LGP Q IRL+AIAK GIGKEHAKW+P AVAT+  +P ITLN+      +  QK +L   CPT+V+  DE  E  T+A   +C+YC EC  +  + K +P+DD  V +   E+RF+F+VETTG L   EVV  AL+I+  K++ ++ Q + +++
Sbjct:  142 NNTQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWAPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVVNSYKDNPEDDAAVTIQMQEDRFIFSVETTGQLKPEEVVICALDIIREKLSYLKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|970625470|gb|KUF73367.1| (DNA-directed RNA polymerases II [Phytophthora nicotianae])

HSP 1 Score: 145.206 bits (365), Expect = 4.941e-38
Identity = 74/167 (44.31%), Postives = 105/167 (62.87%), Query Frame = 0

Query:  106 GISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDER------ENVTVARPG---KCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            G+ I  LGP Q +RL+AIAK GIGKEHAKWSP AVATY  DP+ITLN+      S  QK +L   CPT+V+  DE       +N  +   G   +C+YC EC  LA + K +P+DD  V +   E++F+F+VETTG L   EVV  AL+++  K++ ++ Q + +++
Sbjct:  148 GVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSTYSPEQKAELYKSCPTEVYETDENYEQVRMKNWMLEERGDAMRCMYCDECVKLADSFKDNPEDDSAVTIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 314          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|669154694|ref|XP_008612909.1| (RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Saprolegnia diclina VS20] >gi|530735444|gb|EQC33686.1| RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Saprolegnia diclina VS20])

HSP 1 Score: 140.969 bits (354), Expect = 1.707e-36
Identity = 69/165 (41.82%), Postives = 107/165 (64.85%), Query Frame = 0

Query:  100 SDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDE-RENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            ++    G+ I  LGP Q ++L A+AK GIGKEHAKWSP AVATY  +P+ITLN++     +  Q+ +L   CPT+VF +D+  + + V    +C+YC EC  LA++   +P+DD  V VT   ++F+F+VETTG L   EVV  AL+I+  K++ ++ Q + +++
Sbjct:  142 NNTQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|813148868|ref|XP_012200081.1| (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein [Saprolegnia parasitica CBS 223.65] >gi|641535342|gb|KDO29260.1| RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 140.969 bits (354), Expect = 1.878e-36
Identity = 69/165 (41.82%), Postives = 107/165 (64.85%), Query Frame = 0

Query:  100 SDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDE-RENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            ++    G+ I  LGP Q ++L A+AK GIGKEHAKWSP AVATY  +P+ITLN++     +  Q+ +L   CPT+VF +D+  + + V    +C+YC EC  LA++   +P+DD  V VT   ++F+F+VETTG L   EVV  AL+I+  K++ ++ Q + +++
Sbjct:  142 NNTQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQ 306          

BLAST of EWM29508.1 vs. NCBI_GenBank
Match: gi|1173945987|gb|OQR94560.1| (DNA-directed RNA polymerase II 36 kDa polypeptide A [Thraustotheca clavata])

HSP 1 Score: 137.502 bits (345), Expect = 3.958e-35
Identity = 66/165 (40.00%), Postives = 106/165 (64.24%), Query Frame = 0

Query:  100 SDPSSGGISIVHLGPEQSIRLTAIAKKGIGKEHAKWSPCAVATYTNDPVITLNKEEHGKLSLAQKKQLIDCCPTKVFRLDE-RENVTVARPGKCIYCQECQALAKTLKSDPDDDPVVQVTANEERFVFAVETTGALTAGEVVEHALEIVLSKITEVQTQLVHIAR 263
            ++    G+ I  LGP Q ++LTA+A+ GIGKEHAKWSP AVATY  +P+ITLN++     +  Q+ +    CPT+VF +D+  + + V    +C+YC EC  LA++   +P+DD  V V    ++F+F+VETTG L   E+V  AL+I+  K++ ++ Q + +++
Sbjct:  142 NNTQDSGVIIAKLGPGQRLKLTALARLGIGKEHAKWSPVAVATYMFEPIITLNQKVISMYTNEQRIEFYKSCPTRVFEIDDTYDQIRVEDHLRCMYCDECVKLAQSYMDNPEDDCAVTVAMTPDKFIFSVETTGQLKPEEIVICALDIIKDKLSSLKHQCLELSQ 306