EWM29509.1, cds1164 (CDS) Nannochloropsis gaditana

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|585112072|gb|EWM29509.1| (rna polymerase ii core subunit [Nannochloropsis gaditana])

HSP 1 Score: 241.121 bits (614), Expect = 1.464e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDVSVGRTRPLLLRG 121
            MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDVSVGRTRPLLLRG
Sbjct:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDVSVGRTRPLLLRG 121          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|553190859|ref|XP_005855278.1| (DNA-directed RNA polymerase II subunit RPB3, partial [Nannochloropsis gaditana CCMP526] >gi|422293779|gb|EKU21079.1| DNA-directed RNA polymerase II subunit RPB3, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 219.935 bits (559), Expect = 3.398e-72
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDVSVGRTR 115
            MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDV     R
Sbjct:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDVRYQTKR 115          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|698812760|ref|XP_009839409.1| (hypothetical protein H257_13554 [Aphanomyces astaci] >gi|574105640|gb|ETV71163.1| hypothetical protein H257_13554 [Aphanomyces astaci])

HSP 1 Score: 143.28 bits (360), Expect = 1.987e-39
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLR------SVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDV 109
            MPN R PK+++ E++DDFIKF LS+TD SVANA+RRVMIAEVPTLAIDLVS EVN+SV+ DE+LAHRLG+IPLR      +   R+   A      DCDCD HC  CSVE  LDV
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSA------DCDCDEHCPNCSVEFELDV 109          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|695373173|ref|XP_009514985.1| (hypothetical protein PHYSODRAFT_554134 [Phytophthora sojae] >gi|348687896|gb|EGZ27710.1| hypothetical protein PHYSODRAFT_554134 [Phytophthora sojae])

HSP 1 Score: 140.584 bits (353), Expect = 3.100e-39
Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFR-------DCDCDSHCSRCSVELSLDVS 110
            MP+ R PK+EI EL+DDFI+F LS+TDASVANA+RRVMI+EVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL            L++FR       DCDCD +C  CSVE SLDV+
Sbjct:    1 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNF-------DGGLENFRQRFVYSADCDCDENCPNCSVEFSLDVT 110          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|1173954193|gb|OQS01677.1| (DNA-directed RNA polymerase II 36 kDa polypeptide A [Achlya hypogyna])

HSP 1 Score: 141.739 bits (356), Expect = 6.133e-39
Identity = 73/115 (63.48%), Postives = 84/115 (73.04%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLR------SVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDV 109
            MPN R PK+EI EL+DDFIKF LS+TD SVAN++RRVMIAEVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL           R+   A      DCDCD HC  CSVEL LDV
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLDGFKKRFVYSA------DCDCDEHCPHCSVELELDV 109          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|673031344|ref|XP_008869633.1| (hypothetical protein H310_06366 [Aphanomyces invadans] >gi|574474784|gb|ETW01785.1| hypothetical protein H310_06366 [Aphanomyces invadans])

HSP 1 Score: 141.739 bits (356), Expect = 6.755e-39
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLR------SVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDV 109
            MPN R PK+++ E++DDFIKF LS+TD SVANALRRVMIAEVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPLR      +   R+   A      DCDCD HC  CSVE  LDV
Sbjct:    1 MPNNRFPKIDLQEIRDDFIKFELSETDTSVANALRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSA------DCDCDEHCPNCSVEFELDV 109          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|1173945987|gb|OQR94560.1| (DNA-directed RNA polymerase II 36 kDa polypeptide A [Thraustotheca clavata])

HSP 1 Score: 140.969 bits (354), Expect = 1.511e-38
Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFRDCDCDSHCSRCSVELSLDV 109
            MPN R PK++I EL+DDFIKF LS+TD SVANA+RRVMIAEVPTLAIDLV+ E+N+SV+ DE+LAHRLG+IPL                +DCDCD HC  CSVEL LDV
Sbjct:    1 MPNPRFPKIDIQELRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVTIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSQDCDCDEHCPHCSVELELDV 109          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|953487468|emb|CEG48296.1| (dna-directed rna polymerase ii subunit rpb3-a-like [Plasmopara halstedii])

HSP 1 Score: 140.198 bits (352), Expect = 1.671e-38
Identity = 72/116 (62.07%), Postives = 87/116 (75.00%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFR-------DCDCDSHCSRCSVELSLDV 109
            MP+ R PK+EI EL+DDFI+F LS+TDASVANA+RRVMI+EVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL            L++FR       DCDCD +C  CSVE SLDV
Sbjct:    1 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNF-------DGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDV 109          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|301093788|ref|XP_002997739.1| (DNA-directed RNA polymerase II 36 kDa polypeptide A [Phytophthora infestans T30-4] >gi|262109988|gb|EEY68040.1| DNA-directed RNA polymerase II 36 kDa polypeptide A [Phytophthora infestans T30-4])

HSP 1 Score: 137.502 bits (345), Expect = 4.840e-38
Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFR-------DCDCDSHCSRCSVELSLDVS 110
            MP+ R PK+++ EL+DDFI+F LS+TDASVANA+RRVMI+EVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL            L++FR       DCDCD +C  CSVE +LDV+
Sbjct:    1 MPHPRFPKIDVQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNF-------DGGLENFRQRFVYSQDCDCDENCPNCSVEFTLDVT 110          

BLAST of EWM29509.1 vs. NCBI_GenBank
Match: gi|325182041|emb|CCA16494.1| (DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14])

HSP 1 Score: 139.428 bits (350), Expect = 5.177e-38
Identity = 73/116 (62.93%), Postives = 85/116 (73.28%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSVNPRYKKVADLKDFR-------DCDCDSHCSRCSVELSLDV 109
            MPN + PK+EIL+L+DDFIKF L +TDASVANALRRVMIAEVPTLAIDLV+ EVN+SV+ DE+LAHRLG+IPL            L+ FR       DCDC+ HC  CSVE  LDV
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEVNTSVMTDEFLAHRLGMIPLLF-------DGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDV 109