EWM29510.1, cds1163 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|585112078|gb|EWM29510.1| (hypothetical protein Naga_101392g1 [Nannochloropsis gaditana]) HSP 1 Score: 221.476 bits (563), Expect = 4.178e-73 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 1 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLGEKR 110 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLGEKR Sbjct: 1 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLGEKR 110
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|553180532|ref|XP_005853419.1| (hypothetical protein NGA_0446400, partial [Nannochloropsis gaditana CCMP526] >gi|422295644|gb|EKU22943.1| hypothetical protein NGA_0446400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 216.083 bits (549), Expect = 4.965e-71 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 Query: 1 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLG 107 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLG Sbjct: 1 MSEDAGNKKIAIPASPVSCNLKAAQEDENVFGQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLG 107
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|299117069|emb|CBN73840.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.3142 bits (155), Expect = 1.001e-9 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 32 GQLFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACLGE 108 G++ LA T LE LW+EVG +SEE+R ++GLV F+ LC K ++EE V+ QF +SIA + + LG+ Sbjct: 13 GRIVELAKQTTSRLEVLWDEVGYTSEEKRRQMQGLVDGFQTLCENKEKQEEGVKSQFVTSIADAKDRIKTARKKLGQ 89
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|1210527470|dbj|GAX13755.1| (hypothetical protein FisN_30Lh041 [Fistulifera solaris]) HSP 1 Score: 60.077 bits (144), Expect = 2.989e-8 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0 Query: 34 LFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACL 106 L LA +T LE +W+EVG S E+R L L+V+F+ +C EK+ EE +V + FR +I Q + E+ + + L Sbjct: 80 LATLAASTGNQLEEIWDEVGYSPEDRAAQLSDLLVKFQDICAEKIAEERNVAETFRQTIVQAKDEIKKTASAL 152
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|1210519257|dbj|GAX21841.1| (hypothetical protein FisN_30Hh041 [Fistulifera solaris]) HSP 1 Score: 60.077 bits (144), Expect = 3.293e-8 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0 Query: 34 LFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTACL 106 L LA +T LE +W+EVG S E+R L L+V+F+ +C EK+ EE +V + FR +I Q + E+ + + L Sbjct: 79 LATLAASTGNQLEEIWDEVGYSPEDRAAQLSDLLVKFQDICAEKIAEERNVAETFRQTIVQAKDEIKKTASAL 151
BLAST of EWM29510.1 vs. NCBI_GenBank
Match: gi|219110311|ref|XP_002176907.1| (MAP65_ASE1 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411442|gb|EEC51370.1| MAP65_ASE1 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 58.9214 bits (141), Expect = 7.378e-8 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 34 LFCLANATAGSLEALWEEVGCSSEERREHLKGLVVEFERLCTEKVREEESVRDQFRSSIAQLRQEMVELTAC 105 L LA +TA LE W+EVG S E+R L L+V+F LC K+ EE+ V + FR +IA+ ++E +E TA Sbjct: 74 LTTLAASTAHQLEETWDEVGYSPEDRASQLSDLLVKFRDLCEHKIAEEKGVAETFRQTIAEAKEE-IETTAS 144 The following BLAST results are available for this feature:
BLAST of EWM29510.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|