EWM29564.1, cds1154 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|585112135|gb|EWM29564.1| (nuclease [Nannochloropsis gaditana]) HSP 1 Score: 850.121 bits (2195), Expect = 0.000e+0 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
Query: 1 MLKAKKEFWKSGVRAGRPKNADEKLREHNTAIRGKFCARGAVSQIEARESHQDRRKRSHKTKGSSSDPLTSIHPPSYSASPCSPSAQTSPPALSYFSSLFPPFFPSHGNRGSIAHVDTTTTRSGQKWALGMILLTLLPRVARKTLLSIASSIPKMQQPSVRAFREGPAKSVNFNSMGARWRRFLQGTKAKAAMAAAVASLALGVSLSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG 417
MLKAKKEFWKSGVRAGRPKNADEKLREHNTAIRGKFCARGAVSQIEARESHQDRRKRSHKTKGSSSDPLTSIHPPSYSASPCSPSAQTSPPALSYFSSLFPPFFPSHGNRGSIAHVDTTTTRSGQKWALGMILLTLLPRVARKTLLSIASSIPKMQQPSVRAFREGPAKSVNFNSMGARWRRFLQGTKAKAAMAAAVASLALGVSLSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG
Sbjct: 1 MLKAKKEFWKSGVRAGRPKNADEKLREHNTAIRGKFCARGAVSQIEARESHQDRRKRSHKTKGSSSDPLTSIHPPSYSASPCSPSAQTSPPALSYFSSLFPPFFPSHGNRGSIAHVDTTTTRSGQKWALGMILLTLLPRVARKTLLSIASSIPKMQQPSVRAFREGPAKSVNFNSMGARWRRFLQGTKAKAAMAAAVASLALGVSLSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG 417
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|553193769|ref|XP_005855829.1| (nuclease domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293230|gb|EKU20530.1| nuclease domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 273.863 bits (699), Expect = 1.300e-88 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 283 GKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG 417
GKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG
Sbjct: 1 GKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAAAEKTLAPKGG 135
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|298708921|emb|CBJ30876.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.606 bits (392), Expect = 7.052e-41 Identity = 88/220 (40.00%), Postives = 127/220 (57.73%), Query Frame = 0
Query: 190 KAAMAAAVASLALGVSLSPP--GTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPL-LNNHPGSGRL-SEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKK 405
+A++A A + G +S P + Y TV +IP +F+ L G VV V DGD++R+RH P PL L N +G+ SE+TL IRL +D PE+ Q + EAK+F + + + V+IKLL DQY RA+ V YG PF +KD+S +L+K G V+YRQ GA YD + +L YE AK++++GVW + E P Q+KAR+K+
Sbjct: 60 RASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHASLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYG---KWPF------RKDISAELLKNGLGVVYRQGGAEYDSREESLTEYEKSAKSRKEGVWSRSNGETPAQYKARIKQ 270
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|669147556|ref|XP_008609340.1| (hypothetical protein SDRG_05404 [Saprolegnia diclina VS20] >gi|530738936|gb|EQC37178.1| hypothetical protein SDRG_05404 [Saprolegnia diclina VS20]) HSP 1 Score: 151.369 bits (381), Expect = 4.577e-40 Identity = 91/209 (43.54%), Postives = 124/209 (59.33%), Query Frame = 0
Query: 199 SLALGVSLSPPGT---FQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGS--GRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKAR 402
++ LG+ L P FQR+ TV +IP F + L GKVV V DGDT+R+RH P L N G G+L+E TL +R+AG+D PE K + GQ EEAK+++ ++ DQ V KLL +DQY+RA+ V YG AS P+ ++S +L+++G+A IYRQ GA Y G L T E EA A+ KR +W E P Q+KAR
Sbjct: 14 AVGLGLGLLIPHLQKPFQRFSTVNDIPKEFFEQERTLRGKVVSVTDGDTIRVRH---MPWLANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAKAWLKGELQDQVVSFKLLMKDQYSRAVCMVYYGSWAS-----PT----NVSEELLRQGYANIYRQSGAVYGGLLETFEALEAEAREKRVHIWSLDKRETPAQYKAR 210
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|813128551|ref|XP_012197543.1| (hypothetical protein SPRG_03573 [Saprolegnia parasitica CBS 223.65] >gi|641537809|gb|KDO31653.1| hypothetical protein SPRG_03573 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 149.443 bits (376), Expect = 2.499e-39 Identity = 90/209 (43.06%), Postives = 123/209 (58.85%), Query Frame = 0
Query: 199 SLALGVSLSPPGT---FQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGS--GRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKAR 402
++ LG+ L P FQR+ TV +IP F + L GKVV V DGDT+R+RH P L N G G+L+E TL +R+AG+D PE K + GQ EEAK+++ ++ DQ V KLL +DQY+RA+ V YG A+ P+ ++S +L++ G+A IYRQ GA Y G L T E EA A+ KR +W E P Q+KAR
Sbjct: 14 AVGLGLGLLIPHLQKPFQRFSTVNDIPKEFFEHERTLRGKVVSVTDGDTIRVRHVPW---LANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAKAWLKGELQDQVVSFKLLMKDQYSRAVCLVYYGSWAA---PM------NVSEELLRHGYANIYRQSGAVYGGLLETFEALEAEAREKRVNIWSLDKRETPAQYKAR 210
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|1210520009|dbj|GAX21153.1| (hypothetical protein FisN_23Hu168 [Fistulifera solaris]) HSP 1 Score: 149.443 bits (376), Expect = 2.361e-38 Identity = 90/208 (43.27%), Postives = 118/208 (56.73%), Query Frame = 0
Query: 206 LSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNN--HPGSGRLSEETLIIRLAGIDAPELGKGKKQ-GQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWH-GRDVELPHQFKARMKKAAAE 409
L P Q++ TV +IP F + + V RV DGDT+R+RH P F + N P G+LS++T+ +RL G+D PEL K K Q Q AEEAK F K + Q V + LG+DQY RAIA V PV+++ LP KD S +LV GFA IYR KGA Y G LE + A+ +++G+W GR + K R KK AAE
Sbjct: 83 LGPFSALQQFDTVSDIPAEFFANRRSIYAFVERVTDGDTIRVRHYPGFSIFNQPVEPLKGKLSDKTIKVRLYGVDTPELAKNKNQSSQPFAEEAKEFTKKLLFHQKVVVTFLGKDQYGRAIAQVQTIPVSTLGGTLPP---KDASVELVGAGFAEIYRGKGAEYFGLKDILEDRQTRAQIEKRGIWSLGRAWVSAAEEKKRRKKEAAE 287
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|1173944722|gb|OQR93424.1| (hypothetical protein ACHHYP_02548 [Achlya hypogyna]) HSP 1 Score: 144.05 bits (362), Expect = 2.835e-37 Identity = 90/216 (41.67%), Postives = 122/216 (56.48%), Query Frame = 0
Query: 195 AAVASLALGVSLSPPGTFQR----YHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGS--GRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMK 404
A LALG+ S FQR TV +IP F + L GKVV V DGDT+R+RH PLL + G G+L+E T+ +R+AG+D PE K + GQ EEAK+++ ++ DQ V KLL +DQY+RA+ V YG AS +++S +L+K G+A IYRQ GA Y G L T E EA A ++ +W E P Q+KAR +
Sbjct: 12 AFAVGLALGLGYS---HFQRPFKVLATVNDIPKEYFEQERTLKGKVVAVTDGDTIRVRH---MPLLGSGEGDFKGKLTETTMQLRIAGVDCPETAKFGRPGQPFGEEAKAWLKSQIQDQVVTFKLLMKDQYSRAVCMVYYGSWAS---------PQNVSEELLKLGYANIYRQSGAVYGGLLETFEALEAAACEQKLNIWSQAKRETPAQYKARTR 212
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|1173949221|gb|OQR97285.1| (hypothetical protein THRCLA_21961 [Thraustotheca clavata]) HSP 1 Score: 142.895 bits (359), Expect = 9.520e-37 Identity = 83/194 (42.78%), Postives = 113/194 (58.25%), Query Frame = 0
Query: 212 FQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGS--GRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWH-GRDVELPHQFKAR 402
F+R++TV +IP F + + GKV+ V DGDT+R+RH P L N G G+L+E TL IR+AG+DAPE K + GQ E+AK ++ ++ DQ V IKLL +DQY RA+ V YG AS K+ S +L+K G+A IYRQ GA Y G L E E A+ + +W G E P ++KAR
Sbjct: 29 FKRFNTVNDIPKEYFDEEQTIRGKVITVTDGDTIRVRHVPW---LANGDGDFKGKLTETTLQIRIAGVDAPETAKFGRTGQPFGEDAKQWLKDELFDQIVSIKLLMKDQYGRAVCMVYYGSWAS---------PKNASEELLKAGYANIYRQSGAVYGGLLDKFEALEDEARKNKVKIWSLGDKRETPAEYKAR 210
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|1173952780|gb|OQS00371.1| (hypothetical protein THRCLA_05975 [Thraustotheca clavata]) HSP 1 Score: 139.043 bits (349), Expect = 6.019e-35 Identity = 96/256 (37.50%), Postives = 134/256 (52.34%), Query Frame = 0
Query: 155 MQQPSVRAFREGPAKSVN--FNSMGARWRRFLQGTKAKAAMAAAVASLALGVSL-SPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGS--GRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVW-HGRDVELPHQFKARMK 404
M ++R E K +N F + FL K + A L LG+++ FQR+ TV EIP +F+ Q + K + V DGDTLR+RH P PG+ G+LSE T+ IRL ID PE K QGQ +EAK ++TK + D+ + + LL +DQYARA+ V YG PF KKD S +L+K G A +YRQ GA Y GK ++ E AK ++ +W G E ++KAR++
Sbjct: 1 MDIETIRKEAEAQWKRINTQFGQLDVGKMAFLH-DKNVQLIGAFTFGLVLGLAIPKVRAPFQRFSTVEEIPNFMFQEQRKIRAKAISVSDGDTLRVRHLPFL----RGPGNMDGKLSETTMQIRLCAIDTPETPKFGNQGQPFGDEAKEYLTKILGDRKLMLTLLQKDQYARAVCLVEYGWG---PF------KKDASEELLKAGLANVYRQTGAVYGGKQSVYDKLEERAKNQKLKMWSQGDKFETTSEYKARIR 242
BLAST of EWM29564.1 vs. NCBI_GenBank
Match: gi|301110250|ref|XP_002904205.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096331|gb|EEY54383.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 135.961 bits (341), Expect = 2.679e-34 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 0
Query: 200 LALGVSLSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAYGPVASIPFPLPSFLKKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVW-HGRDVELPHQFKARMK 404
L L +S P F+R+ TV ++P R+F + + V DGDTLR+RH PLF ++ G+LS+ TL IRLAGID PE K GQ +EAK +++ + + + + LL +DQYARA+ V YG PF ++D S +++K G +YRQ GA Y GK E E +K K++G+W G+ +E +KARM+
Sbjct: 7 LRLPLSAGPSQPFRRFSTVEDLPNRLFHQEGKIKAAAVNFSDGDTLRVRHLPLFRGAGSY--DGKLSDHTLQIRLAGIDTPETAKFGNPGQPFGDEAKKWLSSTLEGRKLTLTLLHKDQYARAVCLVQYG---WWPF------RRDASAEILKVGLGQVYRQAGAVYGGKQEIYEMLEEKSKKKKRGIWSQGKKMESSSDYKARMR 201 The following BLAST results are available for this feature:
BLAST of EWM29564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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