EWM29516.1, cds1130 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|585112087|gb|EWM29516.1| (3-hydroxybutyryl- dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query: 1 MALRLAAVLTKSSGRPLPSLRKLRPRFMATTPTSFKTGKPHGPMHQRGEYLEEPPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRGR 315
MALRLAAVLTKSSGRPLPSLRKLRPRFMATTPTSFKTGKPHGPMHQRGEYLEEPPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRGR
Sbjct: 1 MALRLAAVLTKSSGRPLPSLRKLRPRFMATTPTSFKTGKPHGPMHQRGEYLEEPPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRGR 315
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|1084167930|gb|OGL62713.1| (hypothetical protein A3I72_00995 [Candidatus Tectomicrobia bacterium RIFCSPLOWO2_02_FULL_70_19] >gi|1084172819|gb|OGL67121.1| hypothetical protein A3J27_11585 [Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37]) HSP 1 Score: 221.861 bits (564), Expect = 8.085e-68 Identity = 119/263 (45.25%), Postives = 166/263 (63.12%), Query Frame = 0
Query: 54 PPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPN--VEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
P R K++ + ++G+A + L RP RLNAL ++AE + L + A + VR ++TG RAF TGRDLK+S HT E+ +RY + ++ V LP+PT+A ++GP FG+G+E+ALACD+R+A + LC PE +LGIFPGAGG V L + P +A +LIFTA+R G +A +G V+R P + A LA I +NGPLGVR AK+V+ A + A+ + R PL+ T+DF EAL AF EKRKP FRG
Sbjct: 2 PVRAFKEIRYEEESGLAAVTLSRPERLNALGMNLAEEICALSREL--AGEKDVRAVLLTGEGRAFCTGRDLKESAAHTK-EQADRYQLIGMECVTLWEALPMPTVAAINGPCFGFGMEIALACDIRLAAEDATLCFPECALGIFPGAGGTVRLPRAIPPGLAMELIFTAKRLDGREAERIGFVSRAHPKERLMAEARSLAGQIRDNGPLGVRAAKKVIRHAAEMPLPQAIEFSNANRLPLNYTQDFAEALAAFREKRKPVFRG 261
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|935410973|ref|WP_054392435.1| (enoyl-CoA hydratase [Thermus scotoductus] >gi|928533645|gb|KPD25941.1| enoyl-CoA hydratase [Thermus scotoductus]) HSP 1 Score: 183.726 bits (465), Expect = 7.400e-53 Identity = 110/259 (42.47%), Postives = 148/259 (57.14%), Query Frame = 0
Query: 57 NLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
+ L + ++ G+A + L RP LNALS+D+ + L + E + P +VRV + TG +AF+ G DLK+ L RE Y L + LPLPTIA ++G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R S +ALSLG+VNRV + E A++LAQ I +N P+ + AKE + +D A+ + L S TED KE ++AF EKR P F+G
Sbjct: 17 EFEHLSYEVEEGIALVTLRRPEALNALSQDLLQELAEVAEVIHQDP--EVRVAIFTGEGKAFAAGADLKEIVALKDPFMARE-YALLGQQVFAEIAALPLPTIAAINGYALGGGLELALACDLRVASREAKLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVSAEEALSLGLVNRVGEDALEEAKKLAQKILKNAPIALALAKESVVRGEGLDLAEALEIEADLFGYASATEDMKEGVRAFLEKRAPNFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|655045551|ref|WP_028494179.1| (enoyl-CoA hydratase [Thermus antranikianii]) HSP 1 Score: 183.726 bits (465), Expect = 7.642e-53 Identity = 112/267 (41.95%), Postives = 154/267 (57.68%), Query Frame = 0
Query: 49 EYLEEPPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
E++ E P + L + ++ G+A + L RP LNALS+D+ + L + E + P +VRV + TG +AF+ G DLK+ + L RE Y L + LPLPTIA ++G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R S +ALSLG+VNRV + E A++LA+ I +N P+ + AKE + +D A+ + L S TED KE ++AF EKR P F+G
Sbjct: 10 EFILEIP-EFEHLSYEVEEGIALVTLRRPEALNALSQDLLQELAEVTEVIHQDP--EVRVAIFTGEGKAFAAGADLKEIAALKDPFMARE-YALLGQQVFAEIAALPLPTIAAINGYALGGGLELALACDLRVASREAKLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVSAEEALSLGLVNRVGEDALEEAKKLARKIMKNAPIALALAKESVVRGEGLDLAEALEIEADLFGYASATEDMKEGVRAFLEKRAPNFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|518380041|ref|WP_019550248.1| (MULTISPECIES: 3-hydroxybutyryl-CoA dehydratase [Thermus] >gi|568398882|gb|ETN88430.1| 3-hydroxybutyryl-CoA dehydratase [Thermus sp. NMX2.A1]) HSP 1 Score: 183.726 bits (465), Expect = 8.329e-53 Identity = 110/259 (42.47%), Postives = 148/259 (57.14%), Query Frame = 0
Query: 57 NLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
+ L + ++ G+A + L RP LNALS+D+ L + E + P +VRV + TG +AF+ G DLK+ + L RE Y L + LPLPTIA ++G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R S +ALSLG+VNRV + E A++LAQ I +N P+ + AKE + +D A+ + L S TED KE ++AF EKR P F+G
Sbjct: 17 EFEHLSYEVEEGIALVTLRRPEALNALSQDLLRELAEVAEVIHQDP--EVRVAIFTGEGKAFAAGADLKEIAALKDPFMARE-YALLGQQVFAEIAALPLPTIAAINGYALGGGLELALACDLRVASREAKLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVSAEEALSLGLVNRVGEDALEEAKKLAQKIMKNAPIALALAKESVVRGEGLDLAEALEIEADLFGYASATEDMKEGVRAFLEKRAPNFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|740230259|ref|WP_038071525.1| (enoyl-CoA hydratase [Thermus scotoductus]) HSP 1 Score: 182.956 bits (463), Expect = 1.396e-52 Identity = 110/259 (42.47%), Postives = 148/259 (57.14%), Query Frame = 0
Query: 57 NLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
+ L + ++ G+A + L RP LNALS+D+ L + E + P +VRV + TG +AF+ G DLK+ + L RE Y L + LPLPTIA ++G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R S +ALSLG+VNRV + E A++LAQ I +N P+ + AKE + +D A+ + L S TED KE ++AF EKR P F+G
Sbjct: 17 EFEHLSYEVEEGIALVTLRRPEALNALSQDLLRELAEVAEVIHQDP--EVRVAIFTGEGKAFAAGADLKEIAALKDPFMARE-YALLGQQVFAEIAALPLPTIAAINGYALGGGLELALACDLRVASREAKLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVSAEEALSLGLVNRVGEDALEEAKKLAQKIMKNAPIALALAKESVVRGEGLDLAEALEIEADLFGYASATEDMKEGVRAFLEKRPPQFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|505919463|ref|WP_015716466.1| (3-hydroxybutyryl-CoA dehydratase [Thermus scotoductus] >gi|320149806|gb|ADW21184.1| 3-hydroxybutyryl-CoA dehydratase [Thermus scotoductus SA-01]) HSP 1 Score: 182.57 bits (462), Expect = 1.788e-52 Identity = 110/259 (42.47%), Postives = 147/259 (56.76%), Query Frame = 0
Query: 57 NLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
+ L + ++ G+A + L RP LNALS+D+ L + E + P +VRV + TG +AF+ G DLK+ L RE Y L + LPLPTIA ++G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R S +ALSLG+VNRV + E A++LAQ I +N P+ + AKE + +D A+ + L S TED KE ++AF EKR P F+G
Sbjct: 17 EFEHLSYEVEEGIALVTLRRPEALNALSQDLLRELAEVAEVIHQDP--EVRVAIFTGEGKAFAAGADLKEIVALKDPFMARE-YALLGQQVFAEIAALPLPTIAAINGYALGGGLELALACDLRVASREAKLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVSAEEALSLGLVNRVGEDALEEAKKLAQKIMKNAPIALALAKESVVRGEGLDLAEALEIEADLFGYASATEDMKEGVRAFLEKRAPNFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|1086432416|emb|SDH91976.1| (Enoyl-CoA hydratase/carnithine racemase [Alteribacillus persepolensis]) HSP 1 Score: 182.185 bits (461), Expect = 2.136e-52 Identity = 106/255 (41.57%), Postives = 151/255 (59.22%), Query Frame = 0
Query: 66 KNG-VATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEK-VRVCVVTG-GTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPN--VEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRGR 315
+NG +ATI ++RP +LN D +L++L E + + +++ VR ++TG G +AFS G DLK+ + E R K+ D + LP PTIA ++G A G G ELALACD R+A + L LPE S+ I PGAGG L +++ PS AK+LI TARR ++ +G++N+ P + E A ELA I +NGPL V AK ++ NVD T MA+ + + TED EAL+AF EKR P F+G+
Sbjct: 8 QNGHLATITINRPDQLNCFDYD---TLLQLEEQVKSIQLDREVRAVIITGAGEKAFSAGADLKERRTLGEKEVRRNVNKIR-DVFALIEELPQPTIAVVNGYALGGGFELALACDFRIAKETAKLGLPEVSMAIIPGAGGTQRLTQLIGPSKAKELILTARRIDALESEKIGIINQAVPQEKLMETAHELADEIMQNGPLAVIQAKHAIQQGSNVDIHTGMAIESKAYEVIIPTEDRVEALEAFREKRAPNFKGK 258
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|551068695|ref|WP_022799198.1| (3-hydroxybutyryl-CoA dehydratase [Thermus islandicus]) HSP 1 Score: 182.185 bits (461), Expect = 3.061e-52 Identity = 112/276 (40.58%), Postives = 152/276 (55.07%), Query Frame = 0
Query: 40 PHGPMHQRGEYLEEPPRNLKDLEFSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKD-SKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEENAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
P H+ LE P L + ++ G+A + L RP LNALS+D+ + L ++ E + P + RV + TG +AF+ G DLK+ + L RE Y L + LP+PTIA + G A G GLELALACDLRVA + L LPE LG+ PG GG L ++ A DLIFT R +AL LG+VNRV+ N E A+ LA+ I +NGP+ + AKE + VD A+ + L + TED KE ++AF EKR P F+G
Sbjct: 2 PQEDAHEHEFVLEIP--EFTHLAYEVEEGIALVTLRRPQALNALSQDLLQELAQVAEVIHQDP--EARVAIFTGEGKAFAAGADLKEIAALKDPFAARE-YALLGQQVFAEIAALPIPTIAAIHGYALGGGLELALACDLRVAAKGARLGLPEVGLGLIPGFGGTQRLPRLIGRGRALDLIFTGRHVDAEEALFLGLVNRVAENALEEAKRLARQILKNGPVALALAKESVVRGEGVDLAEALEIEADLFGYAAATEDMKEGVRAFLEKRPPNFKG 272
BLAST of EWM29516.1 vs. NCBI_GenBank
Match: gi|653174072|ref|WP_027417043.1| (enoyl-CoA hydratase [Aneurinibacillus terranovensis]) HSP 1 Score: 181.415 bits (459), Expect = 3.745e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 0
Query: 63 FSLKNGVATIKLDRPHRLNALSEDMAESLMRLCEYMTAAPVEKVRVCVVTGGTRAFSTGRDLKDSKLHTTLEKRERYMKLALDSVMAVHRLPLPTIACLSGPAFGWGLELALACDLRVAHPASLLCLPETSLGIFPGAGGVVLLREVVSPSIAKDLIFTARRFSGTDALSLGVVNRVSPNVEE---NAEELAQCIAENGPLGVRGAKEVMEGAHNVDFGTAMALARQLRAPLSETEDFKEALQAFEEKRKPTFRG 314
F+ +N +ATI L+RP+ LNA + + L + E + P + +R +VT RAFS G DLK+ + T + R K+ D A+ R+P PTIA ++G AFG G ELALACD R A + + L E SLGI PGAGG L ++ PS AK+LI TAR+ S +A G++N V+ N++E A LA+ I +N PL V AK ++ VD T + + + + T+D EAL+AF EKRKP FRG
Sbjct: 8 FTCENHMATITLNRPNELNAFNYETLVRLQEIIEEIRQDP-KNIRAVIVTAEGRAFSAGADLKERRTLTEQQVRRNVRKIR-DVFTALERIPQPTIAAINGYAFGGGFELALACDFRFAVRDAKMGLTEVSLGIIPGAGGTQRLTRLIGPSQAKELILTARKISAEEAWEKGILNGVTDNLQELHRRAYSLAEEILQNAPLAVNQAKYAIDKGIGVDLQTGLDIEAKAYEVIIPTKDRVEALEAFREKRKPVFRG 260 The following BLAST results are available for this feature:
BLAST of EWM29516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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