EWM30550.1, cds113 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|585113217|gb|EWM30550.1| (conserved uncharacterized protein [Nannochloropsis gaditana]) HSP 1 Score: 1367.83 bits (3539), Expect = 0.000e+0 Identity = 670/670 (100.00%), Postives = 670/670 (100.00%), Query Frame = 0
Query: 1 MSRTPYLSATADGTNNTTNAVANTAKLSEEKSTRSIEQSSIGTAHRRGTLDILQHDKYALAAFLFRTSLVLAIAWYLNPERIPYCQCLARILLLQIWEWSDAELPGAVAHFLVLFKEILRSLSLFLLTLSATCFCAACYQSTRADSSSKLLENLTDPQRRLLGLENVQPKIDQKTPRVEVAEMPTPLEKGSFTPLVSPSHPPSSAGKGRLPLVDTTGGPSVESSSSQYLTPPPSMYRARATPTKVALFPSGGSGGDKGRPPRRKSGGDGAVSFGESADVKMKGLLDEMLVAADGTPVSGQQLTPQGRGLSASKGAHQFLSNVPISPLTNEVVGPYRESALGGAGGGLLGGPSGSPTERWDVREWPQILQHRIGGGLDVYKLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTPSGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGSAVHPEGGARGDKGGQKEDGKRGDKAFGLPDASKRKSDGDRDGSPEVEGR 670
MSRTPYLSATADGTNNTTNAVANTAKLSEEKSTRSIEQSSIGTAHRRGTLDILQHDKYALAAFLFRTSLVLAIAWYLNPERIPYCQCLARILLLQIWEWSDAELPGAVAHFLVLFKEILRSLSLFLLTLSATCFCAACYQSTRADSSSKLLENLTDPQRRLLGLENVQPKIDQKTPRVEVAEMPTPLEKGSFTPLVSPSHPPSSAGKGRLPLVDTTGGPSVESSSSQYLTPPPSMYRARATPTKVALFPSGGSGGDKGRPPRRKSGGDGAVSFGESADVKMKGLLDEMLVAADGTPVSGQQLTPQGRGLSASKGAHQFLSNVPISPLTNEVVGPYRESALGGAGGGLLGGPSGSPTERWDVREWPQILQHRIGGGLDVYKLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTPSGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGSAVHPEGGARGDKGGQKEDGKRGDKAFGLPDASKRKSDGDRDGSPEVEGR
Sbjct: 1 MSRTPYLSATADGTNNTTNAVANTAKLSEEKSTRSIEQSSIGTAHRRGTLDILQHDKYALAAFLFRTSLVLAIAWYLNPERIPYCQCLARILLLQIWEWSDAELPGAVAHFLVLFKEILRSLSLFLLTLSATCFCAACYQSTRADSSSKLLENLTDPQRRLLGLENVQPKIDQKTPRVEVAEMPTPLEKGSFTPLVSPSHPPSSAGKGRLPLVDTTGGPSVESSSSQYLTPPPSMYRARATPTKVALFPSGGSGGDKGRPPRRKSGGDGAVSFGESADVKMKGLLDEMLVAADGTPVSGQQLTPQGRGLSASKGAHQFLSNVPISPLTNEVVGPYRESALGGAGGGLLGGPSGSPTERWDVREWPQILQHRIGGGLDVYKLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTPSGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGSAVHPEGGARGDKGGQKEDGKRGDKAFGLPDASKRKSDGDRDGSPEVEGR 670
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|813134673|ref|XP_012198236.1| (hypothetical protein SPRG_04246 [Saprolegnia parasitica CBS 223.65] >gi|641537244|gb|KDO31107.1| hypothetical protein SPRG_04246 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 105.145 bits (261), Expect = 3.169e-20 Identity = 83/267 (31.09%), Postives = 118/267 (44.19%), Query Frame = 0
Query: 380 KLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP---------------SGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRF--------GHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVE--LPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGS 621
++ + D LR+ L + D+L F V L CG+ ++LL E+ P + L D LN R V + +L E E +M F + +RL + +D +L Y W GG + + T E LPTDA+LIM++F D + + DRPF + H+ VPP S S+RG LI SPP F V+ NG V I GK N +IV+FL R+ + N LLE +F S
Sbjct: 235 QMGDICDRLRQVLAQHLQDVLVSFLQNVDELVACGLRREMLLCEITVQPLLSVVMPGATEPTTFHQIALHDLLNACRAD-PLFVSKTRPNVHLLREYETFMKYFDVKEEYSKAYCIQRLRTLAEDGFLGQYRWDSGGAWKGKAWTKEANLPTDAELIMNLFCAMLDDVLP-AVSDNDRPFRRAHYAPVPP---TKSASIRGMFLIYYSQPSPPNFKVIANGQVREILPGKTNVFQSIVLFLRAIRQFKSGHLGNINLHILLEEIFES 496
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|669170553|ref|XP_008620625.1| (hypothetical protein SDRG_16202 [Saprolegnia diclina VS20] >gi|530727703|gb|EQC25945.1| hypothetical protein SDRG_16202 [Saprolegnia diclina VS20]) HSP 1 Score: 102.834 bits (255), Expect = 1.893e-19 Identity = 82/267 (30.71%), Postives = 117/267 (43.82%), Query Frame = 0
Query: 380 KLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP---------------SGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRF--------GHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVE--LPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGS 621
++ + D LR+ L + D+L F V L CG+ ++LL E+ P + L D L R V + +L E E +M F + +RL + +D +L Y W GG + + T E LPTDA+LIM++F D + + DRPF + H+ VPP S S+RG LI SPP F V+ NG V I GK N +IV+FL R+ + N LLE +F S
Sbjct: 238 QMGDICDRLRQVLAQHLQDVLVSFLQNVDELVACGLRREMLLCEITVQPLLSVVMPGATEPTTFHQIALHDLLTACRAD-PLFVSKTRPNVHLLREYETFMKYFDVKEEYSKAYCIQRLRTLAEDGFLGQYRWDSGGAWKGKAWTKEANLPTDAELIMNLFCAMLDDVLP-AVSDNDRPFRRAHYAPVPPT---KSASIRGMFLIYYSQPSPPNFKVIANGQVREILPGKTNVFQSIVLFLRAIRQFKSGHLGNINLHILLEEIFES 499
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|1173927196|gb|OQR81266.1| (hypothetical protein ACHHYP_16616 [Achlya hypogyna]) HSP 1 Score: 98.5969 bits (244), Expect = 5.225e-18 Identity = 78/268 (29.10%), Postives = 118/268 (44.03%), Query Frame = 0
Query: 380 KLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVN---------------STPSGLGLEDYLNQARGQWEKEVQEYTGLKRVLSEGEGWMDRF--------GHIYRRLGAMVQDSYLSSYEWSRGGVLRHR--NVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGSA 622
++ + D LR L + D+L F V L +CG+ ++LLGE+ ST + L D L R + + +L E E +M F + +RL + +D +L Y W GG + + + LPTDA+LIM++F D + + DRPF + H+ VPP S S+RG LI PP F V+ NG V I GK N +I++FL ++ + N LLE +F S+
Sbjct: 238 RMGDLCDRLRTVLAQHLQDVLGSFLTNVDELVQCGLRREMLLGEITVQPILTVLMPGATEPSTFHQIALTDLLTACRTDPVFLSKTRPNV-HLLREYETFMKYFDVKEEYSKAYCIQRLKTLAEDGFLGQYRWDSGGAWKGKPWSKDANLPTDAELIMNLFCAMLDDVLP-AVSDTDRPFRRAHYAPVPP---TKSASIRGMFLIYYSQPLPPNFKVIANGQVREILPGKTNVFQSIILFLHAIKQFKSGHLSNINLHILLEEIFESS 500
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|1173957257|gb|OQS03829.1| (hypothetical protein THRCLA_03878, partial [Thraustotheca clavata]) HSP 1 Score: 94.7449 bits (234), Expect = 3.609e-17 Identity = 78/268 (29.10%), Postives = 119/268 (44.40%), Query Frame = 0
Query: 381 LSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP---------------SGLGLEDYLNQARGQ--WEKEVQEYTGLKRVLSEGEGWMDRF--------GHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVE--LPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVFGS 621
+ + D LR+ L + D+L+ F + L G+ ++LLGE+ P + L D L+ R + + + L R E E +M F + +RL + +D +L Y W GG + + + E LPTDA+LIM++F D + + DRPF + H+ VPP S S+RG LI +PP F V+ NG V I GK N +I++FL ++ + N LLE VF S
Sbjct: 124 MGDLCDRLRQVLAQHLQDVLSSFTQNMDELVLSGLRREMLLGEITVQPVLTVVMPGSTEPTTFHQIALHDLLSACRTDPLFLSKTRPNVHLLR---EYETFMKYFDVKEEYNKAYCIQRLKTLAEDGFLGQYRWDSGGSWKGKPWSKEANLPTDAELIMNLFCAMLDDVLP-AVSDTDRPFRRAHYAPVPPT---KSASIRGMFLIYYSQPTPPNFKVIANGQVREILPGKTNVFQSIILFLHAIKQYKSGHLGNINLHILLEEVFES 384
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|673023354|ref|XP_008865638.1| (hypothetical protein H310_03519 [Aphanomyces invadans] >gi|574478866|gb|ETW05861.1| hypothetical protein H310_03519 [Aphanomyces invadans]) HSP 1 Score: 86.2705 bits (212), Expect = 4.409e-14 Identity = 74/267 (27.72%), Postives = 112/267 (41.95%), Query Frame = 0
Query: 379 YKLSNYVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP---------------SGLGLEDYLNQARG---------QWEKEVQEYTGLKRVLSEGEGWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVE--LPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDRWLPKYNPGYRRLLEGVF 619
+ + N D LR L + D+L + L + G+ ++L+ P S L ++ +N AR Q ++EY L + E + + +RL + +D +L Y W GG + + T + LP+DA+LIM++F D + DRPF + H+ PP S S+RG LI SPP F V+ NG V I GK N AIV+FL + + N LLE +F
Sbjct: 239 HHMGNLCDTLRHVLAQHLQDVLGTLAQNMDELSKLGLRREILVDLSTVHPMLSIQVPGEPTPRTISNLSMKSLINMARTEPAFASRARQNVHLLREYETLMKYFDVKEEYSSAYA--IQRLQTLGEDGFLGPYRWDSGGKWKGKPWTKDSMLPSDAELIMNLFCAMLDDVLPATC-DTDRPFRRTHYAPSPP---TKSASIRGMFLIFCSQVSPPNFKVIANGAVWEILPGKTNVFQAIVLFLHAVKTYKSGHLGNINLHVLLEEIF 499
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|953495810|emb|CEG42706.1| (Uncharacterized conserved membrane protein [Plasmopara halstedii]) HSP 1 Score: 85.8853 bits (211), Expect = 6.696e-14 Identity = 71/265 (26.79%), Postives = 118/265 (44.53%), Query Frame = 0
Query: 384 YVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP-----------SGLGLEDYL----------NQARGQWEKEVQEYTGLKRVLSEGE------GWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDR--WLPKYNPGYRRLLEGVF 619
Y N+R L + D++ F AL CGV D+LL V S + + L D L +Q RG + E E+ ++ L+ G+ ++R ++ RL + +D L Y W++G + ++ LPTDA+++M+ F D M +G DRPF K ++ P + +R R +++ PP+F + G V I G++N AIVV+L ++ + +L N R+ E VF
Sbjct: 255 YCRNIRRLLAYHVKDVVEAFLDNANALNNCGVMADVLLRRVPSQAILCPPGQTNQMTNVSLSDMLRNLAKDPLFYSQERGVYLFE--EHQSFEKYLNVGDPSSTDYASLERQQYVLERLIMLSKDRSLDRYRWNKGSTWKGKDWADSLPTDAEILMNTFCCLMDNMLPAD-NGRDRPFWKSYYFNKGPN-RPFTLQVRSRLFLVKTVARPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLESIN--LHRIFEQVF 513
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|566007971|gb|ETI30882.1| (hypothetical protein, variant 6 [Phytophthora parasitica P1569] >gi|567945447|gb|ETK71258.1| hypothetical protein, variant 6 [Phytophthora parasitica] >gi|567974070|gb|ETL24717.1| hypothetical protein, variant 6 [Phytophthora parasitica] >gi|570935421|gb|ETP00678.1| hypothetical protein, variant 6 [Phytophthora parasitica CJ01A1] >gi|570965722|gb|ETP28841.1| hypothetical protein, variant 6 [Phytophthora parasitica P10297] >gi|970655528|gb|KUF93675.1| hypothetical protein AM588_10004529 [Phytophthora nicotianae]) HSP 1 Score: 84.3445 bits (207), Expect = 9.388e-14 Identity = 71/263 (27.00%), Postives = 120/263 (45.63%), Query Frame = 0
Query: 384 YVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP-----------SGLGLEDYL-NQARGQ--WEKE-----VQEYTGLKRVLSEGE------GWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDR--WLPKYNPGYRRLLEGVF 619
Y N+R L + D++ F AL CGV D+LL V S + + L D L N A+ + KE +E+ ++ L+ G+ ++R ++ RL + +D L + W++G + + T LPTDA+++M+ F D M + DRPF K ++ P + R +R R +++ PP+F + G V I G++N AIVV+L ++ + +L N R++E VF
Sbjct: 138 YCRNIRRLLAYHVKDVVEAFLENANALNECGVMADVLLRRVPSQALLCPPGQTNQMTNVSLSDMLQNLAKSPLFFSKERGVYLFEEHQSFEKYLNVGDPSSTDYSSLERQQYVLERLIMLSKDRSLDRFRWNKGSAWKGKEWTENLPTDAEILMNTFCCMMDNMLPAD-NERDRPFWKSYYFSKGPNRPFTPR-VRSRLFLVQTVGRPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLESIN--LHRIIEQVF 396
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|568003582|gb|ETL77930.1| (hypothetical protein, variant 6 [Phytophthora parasitica] >gi|568033487|gb|ETM31193.1| hypothetical protein, variant 6 [Phytophthora parasitica] >gi|570311654|gb|ETO59602.1| hypothetical protein, variant 6 [Phytophthora parasitica P1976]) HSP 1 Score: 84.3445 bits (207), Expect = 1.075e-13 Identity = 71/263 (27.00%), Postives = 120/263 (45.63%), Query Frame = 0
Query: 384 YVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP-----------SGLGLEDYL-NQARGQ--WEKE-----VQEYTGLKRVLSEGE------GWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDR--WLPKYNPGYRRLLEGVF 619
Y N+R L + D++ F AL CGV D+LL V S + + L D L N A+ + KE +E+ ++ L+ G+ ++R ++ RL + +D L + W++G + + T LPTDA+++M+ F D M + DRPF K ++ P + R +R R +++ PP+F + G V I G++N AIVV+L ++ + +L N R++E VF
Sbjct: 138 YCRNIRRLLAYHVKDVVEAFLENANALNECGVMADVLLRRVPSQALLCPPGQTNQMTNVSLSDMLQNLAKSPLFFSKERGVYLFEEHQSFEKYLNVGDPSSTDYSSLERQQYVLERLIMLSKDRSLDRFRWNKGSAWKGKEWTENLPTDAEILMNTFCCMMDNMLPAD-NERDRPFWKSYYFSKGPNRPFTPR-VRSRLFLVQTVGRPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLESIN--LHRIIEQVF 396
BLAST of EWM30550.1 vs. NCBI_GenBank
Match: gi|568003576|gb|ETL77924.1| (hypothetical protein L917_21191 [Phytophthora parasitica] >gi|568003577|gb|ETL77925.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568003578|gb|ETL77926.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568033481|gb|ETM31187.1| hypothetical protein L914_21202 [Phytophthora parasitica] >gi|568033482|gb|ETM31188.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568033483|gb|ETM31189.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570311648|gb|ETO59596.1| hypothetical protein F444_22082 [Phytophthora parasitica P1976] >gi|570311649|gb|ETO59597.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570311650|gb|ETO59598.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 85.1149 bits (209), Expect = 1.229e-13 Identity = 71/263 (27.00%), Postives = 120/263 (45.63%), Query Frame = 0
Query: 384 YVDNLRETLYTEIIDLLTRFNAAVVALERCGVPLDLLLGEVNSTP-----------SGLGLEDYL-NQARGQ--WEKE-----VQEYTGLKRVLSEGE------GWMDRFGHIYRRLGAMVQDSYLSSYEWSRGGVLRHRNVTVELPTDADLIMHVFLWRCDAMAEHRLHGGDRPFVKQHFLEVPPGTEESSRSLRGRNLIMRHGTSPPYFSVVENGLVHRIPTGKDNALVAIVVFLFLARRDR--WLPKYNPGYRRLLEGVF 619
Y N+R L + D++ F AL CGV D+LL V S + + L D L N A+ + KE +E+ ++ L+ G+ ++R ++ RL + +D L + W++G + + T LPTDA+++M+ F D M + DRPF K ++ P + R +R R +++ PP+F + G V I G++N AIVV+L ++ + +L N R++E VF
Sbjct: 257 YCRNIRRLLAYHVKDVVEAFLENANALNECGVMADVLLRRVPSQALLCPPGQTNQMTNVSLSDMLQNLAKSPLFFSKERGVYLFEEHQSFEKYLNVGDPSSTDYSSLERQQYVLERLIMLSKDRSLDRFRWNKGSAWKGKEWTENLPTDAEILMNTFCCMMDNMLPAD-NERDRPFWKSYYFSKGPNRPFTPR-VRSRLFLVQTVGRPPHFKALVKGAVREIVPGEENCFHAIVVYLHAVKKMKAGYLESIN--LHRIIEQVF 515 The following BLAST results are available for this feature:
BLAST of EWM30550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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