EWM29590.1, cds1128 (CDS) Nannochloropsis gaditana

Overview
NameEWM29590.1
Unique Namecds1128
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1261396..1261458 +
Alignment locationCM002456.1:1261821..1262459 +

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Properties
Property NameValue
Protein idEWM29590.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g38.8679.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1261396..1261458 +
CM002456.1supercontigCM002456.1:1261821..1262459 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29590.1 vs. NCBI_GenBank
Match: gi|585112161|gb|EWM29590.1| (hypothetical protein Naga_100006g38 [Nannochloropsis gaditana])

HSP 1 Score: 475.707 bits (1223), Expect = 8.501e-170
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 
Query:    1 MIHARGVTIVALSILGMAAGQNLRFPEAADGLRLPESSEGTLPVSNNAASHPLIGAPASESSPVRSSAPSVSVSPSHFPSPVVRDMGLYTSDEIEGTVRFIMPKFRGLPVDYCLRYQHGSVRRERRGIDCGVPAASQYCRDQGMDDSIDYVVTYYSSQATSTLGDGAVHAADPTGDGKGRHTWFTSITCRFSVGEDVAVAEAGGWPVEEISTRWEAVDVKSTAGGRSMEGHSD 233
            MIHARGVTIVALSILGMAAGQNLRFPEAADGLRLPESSEGTLPVSNNAASHPLIGAPASESSPVRSSAPSVSVSPSHFPSPVVRDMGLYTSDEIEGTVRFIMPKFRGLPVDYCLRYQHGSVRRERRGIDCGVPAASQYCRDQGMDDSIDYVVTYYSSQATSTLGDGAVHAADPTGDGKGRHTWFTSITCRFSVGEDVAVAEAGGWPVEEISTRWEAVDVKSTAGGRSMEGHSD
Sbjct:    1 MIHARGVTIVALSILGMAAGQNLRFPEAADGLRLPESSEGTLPVSNNAASHPLIGAPASESSPVRSSAPSVSVSPSHFPSPVVRDMGLYTSDEIEGTVRFIMPKFRGLPVDYCLRYQHGSVRRERRGIDCGVPAASQYCRDQGMDDSIDYVVTYYSSQATSTLGDGAVHAADPTGDGKGRHTWFTSITCRFSVGEDVAVAEAGGWPVEEISTRWEAVDVKSTAGGRSMEGHSD 233
The following BLAST results are available for this feature:
BLAST of EWM29590.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112161|gb|EWM29590.1|8.501e-170100.00hypothetical protein Naga_100006g38 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1129rna1129Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications