EWM29531.1, cds1127 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|585112102|gb|EWM29531.1| (RNase Z-like protein [Nannochloropsis gaditana]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEEASDEQILMSQIEGK 289
MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEEASDEQILMSQIEGK
Sbjct: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEEASDEQILMSQIEGK 289
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|1210520084|dbj|GAX20967.1| (ribonuclease Z [Fistulifera solaris]) HSP 1 Score: 204.142 bits (518), Expect = 1.246e-56 Identity = 116/283 (40.99%), Postives = 167/283 (59.01%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYE--------LQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEE 275
+LLDVGEG++GQL + E+ S+ A+W+SHPHADHHLG++++L +++ + G P++++ P P+ +L E+ D ++E +K + + S LEREL + ++ V V HC ++ VVLDG + R+VYSGD RP R+L A GA VLIHEATF + AEAV ++HSTVGEAL+VAR M+AK V+LTHFSQRYP+ P YE L+V AFD M L ++G AA + PA++ L+P + E
Sbjct: 482 ILLDVGEGTVGQLLRTQHISSSIELFQSVKAVWLSHPHADHHLGVLRLLHEKKKQLSTDG-------PVILIGPTPLFDFLNEYSKQDPSIE------------NSFVKVDCRDLVHGQSSMLANVLERELGISSVRTVPVAHCAHSYAVVLDGTSFGRVVYSGDCRPSRQLAAAALGADVLIHEATFEDGMEAEAVLKRHSTVGEALNVARDMQAKCVVLTHFSQRYPRIPPT-SSYEKDSIDSPSLKVVFAFDHMRLTPGNLGLAARITPAVRLLYPEDTE 744
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|219122100|ref|XP_002181391.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407377|gb|EEC47314.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 201.445 bits (511), Expect = 8.744e-56 Identity = 113/278 (40.65%), Postives = 163/278 (58.63%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGE-AVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYE--LQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEE 275
+LLDVGEG++GQL GPT L + A+WISHPHADHHLG++++L R+ P P+L+M P P++++L E+ S D+ + AV + D+ R + A L+ L + + V V HCP++FG++L+G +LVYSGD RP +L + GA +LIHEATF + EA ++HST+GEAL V M+AK V+LTHFSQRYPK P P ++E + V AFD M L ++ A+ + PA++ L+P E E
Sbjct: 472 ILLDVGEGTVGQLLRANSGPT-SSTLAHIKAVWISHPHADHHLGILRLLHDRK-----------APDPLLLMCPSPIISFLTEYCSMDSDLSSAYVAVNCN--------------DLIRENAKASFLLKEALGIDSSFAVPVTHCPYSFGLILEGTCFGKLVYSGDCRPSSQLAKCALGADLLIHEATFEDGMEVEAALKRHSTIGEALSVGMEMKAKCVVLTHFSQRYPKVPPTPVNHEGSIPVIFAFDFMRLSPSNLVMASKVTPAIRLLYPEESE 723
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|12835202|dbj|BAB23185.1| (unnamed protein product, partial [Mus musculus]) HSP 1 Score: 194.512 bits (493), Expect = 1.819e-55 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKP-PPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLF 270
+LLD GEG+ GQL Y G + VL SL+A+++SH HADHH GL+ +L R A A LG KP P+L++AP + AWL+++ + + ++ + +G N +ER+ L DL V HC AFG L +GW++VYSGDT PC L Q G+ AT+LIHEAT + EAVE+ HST +A++V RM A+ ++L HFSQRY K P+ PD+ +V +AFD M + F D L+P L+ LF
Sbjct: 112 VLLDCGEGTFGQLCRHY-GQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLG----KPFQPLLVVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSN--TTLERL----ISLLLETCDLEEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIPLFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALF 371
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|148678452|gb|EDL10399.1| (elaC homolog 2 (E. coli), isoform CRA_b [Mus musculus]) HSP 1 Score: 194.126 bits (492), Expect = 3.789e-55 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKP-PPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLF 270
+LLD GEG+ GQL Y G + VL SL+A+++SH HADHH GL+ +L R A A LG KP P+L++AP + AWL+++ + + ++ + +G N +ER+ L DL V HC AFG L +GW++VYSGDT PC L Q G+ AT+LIHEAT + EAVE+ HST +A++V RM A+ ++L HFSQRY K P+ PD+ +V +AFD M + F D L+P L+ LF
Sbjct: 140 VLLDCGEGTFGQLCRHY-GQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLG----KPFQPLLVVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSN--TTLERL----ISLLLETCDLEEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIPLFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALF 399
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|821482745|ref|XP_012404293.1| (PREDICTED: zinc phosphodiesterase ELAC protein 2-like, partial [Sarcophilus harrisii]) HSP 1 Score: 190.274 bits (482), Expect = 4.022e-55 Identity = 108/275 (39.27%), Postives = 156/275 (56.73%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEE 275
+LLD GEG+ GQL Y G + +L++++A+++SH HADHH GL+ +L R +A A +G P+L++AP V+ WL+++ D E AV +++ V ++ LE+ DL V HC AFG L ++GW++VYSGDT PC L Q G+GAT+LIHEAT + EAVE+ HST +A+ V +M AK ++L HFSQRY K P+ PD+ +V +AFD M + F D L+ L+ LF E E
Sbjct: 10 LLLDCGEGTFGQLCRHY-GDEVDRILVNIAAVFVSHIHADHHTGLLNILLQRNRALASVG---KSSIPLLLVAPTQVMTWLQQYH--DHCQEILGAVSMIPAK---CLQKGTEVSKPMIARLITSLLEK-YDLEEFQTCLVKHCKNAFGCALVHKSGWKIVYSGDTMPCDALVQLGKGATMLIHEATLEDGLEEEAVEKTHSTTSQAIGVGVKMNAKFIMLNHFSQRYAKIPLFSPDFNEKVGIAFDHMRVGFGDFSTVPRLISPLKALFADEIE 274
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|568975508|ref|XP_006534131.1| (PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X5 [Mus musculus]) HSP 1 Score: 193.741 bits (491), Expect = 5.710e-55 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKP-PPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLF 270
+LLD GEG+ GQL Y G + VL SL+A+++SH HADHH GL+ +L R A A LG KP P+L++AP + AWL+++ + + ++ + +G N +ER+ L DL V HC AFG L +GW++VYSGDT PC L Q G+ AT+LIHEAT + EAVE+ HST +A++V RM A+ ++L HFSQRY K P+ PD+ +V +AFD M + F D L+P L+ LF
Sbjct: 140 VLLDCGEGTFGQLCRHY-GQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLG----KPFQPLLVVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSN--TTLERL----ISLLLETCDLEEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIPLFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALF 399
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|1026949473|ref|XP_016612849.1| (hypothetical protein SPPG_00513 [Spizellomyces punctatus DAOM BR117] >gi|907099574|gb|KND04810.1| hypothetical protein SPPG_00513 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 198.749 bits (504), Expect = 2.285e-54 Identity = 113/289 (39.10%), Postives = 170/289 (58.82%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWG---------EAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDY-----ELQVCVAFDLMTLRFKDVGRAAALLPALQKLFPVEEE 275
+LLD GEG+LGQL + + E L +L I++SH HADHHLG++++L + P P++I+AP WL E+ + E+G E V + G +G + D+E+ + L++ L L ++ VGVHHCP+A+ +VLD A ++V+SGD RP L AGRGA+V+IHEAT ++K EA+E++H T GEA+ VA+ MEA+ ++LTHFSQRYPK P+LP D +++V +A+DLM + R L+P L+ LFP ++
Sbjct: 570 VLLDAGEGTLGQLFRHFGPDMMKEALRNLRMIFVSHLHADHHLGVVRILKYWDEVRD-----SRNPQPLIIVAPARYQIWLEEYADCE---EFGLKHVLFLNAEDVRWNASGTDGRDE-----DVEKTT--TINTLKKTLHLKDIHTVGVHHCPWAYALVLDTEAAGKVVFSGDCRPSEDLVNAGRGASVVIHEATLEDDKVEEALEKRHCTTGEAIQVAKSMEAQNLLLTHFSQRYPKIPILPNDVDDDLTQVKVGIAYDLMRAKLSSFWRLPLLVPGLRALFPQDDN 843
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|723576019|ref|XP_010308065.1| (PREDICTED: zinc phosphodiesterase ELAC protein 2-like, partial [Balearica regulorum gibbericeps]) HSP 1 Score: 190.274 bits (482), Expect = 2.350e-54 Identity = 103/273 (37.73%), Postives = 153/273 (56.04%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKPPPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLEREL---DLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLF 270
+LLD GEG+ GQL Y G + +VL ++ A+++SH H DHH GL+ +L RR+A A LG P+ ++AP ++ WL E+ + E + GD + + ++ + E + P A ++ L DL V HC AF + ++GW++VYSGDT PC L Q G+ AT+LIHEAT + EAVE+ HST +A+ +M A+ ++L HFSQRY K P+ D+ +V +AFD M +RF D L+P L+ LF
Sbjct: 74 LLLDCGEGTFGQLCRHY-GEQVDQVLCNIVAVFVSHMHTDHHSGLLNILMERRRAFAALGQAFS---PLFLVAPEQIMPWLHEYHNH------CEEILGDI---KMITSQSLVTGCENIKPKAKWFVSSLLENYDLAEFQTCEVQHCKNAFACSMMHKSGWKIVYSGDTMPCMALVQMGKNATLLIHEATLEDGMEKEAVEKTHSTTSQAIQTGMKMNAEFIMLNHFSQRYAKIPLFSEDFSEKVGIAFDHMRVRFGDFLTIPKLIPPLKALF 333
BLAST of EWM29531.1 vs. NCBI_GenBank
Match: gi|1039738062|ref|XP_017170220.1| (PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X3 [Mus musculus]) HSP 1 Score: 194.126 bits (492), Expect = 4.165e-54 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 1 MLLDVGEGSLGQLASLYEGPTLWEVLISLSAIWISHPHADHHLGLMKVLAARRQAAADLGLLGGKP-PPMLIMAPRPVLAWLREHRSWDATVEWGEAVEGDRGGGEGLMKENYLVDMERMSPFAYQYLERELDLLNLTNVGVHHCPFAFGVVLDGRAGWRLVYSGDTRPCRRLEQAGRGATVLIHEATFGNEKAAEAVERKHSTVGEALDVARRMEAKTVILTHFSQRYPKFPVLPPDYELQVCVAFDLMTLRFKDVGRAAALLPALQKLF 270
+LLD GEG+ GQL Y G + VL SL+A+++SH HADHH GL+ +L R A A LG KP P+L++AP + AWL+++ + + ++ + +G N +ER+ L DL V HC AFG L +GW++VYSGDT PC L Q G+ AT+LIHEAT + EAVE+ HST +A++V RM A+ ++L HFSQRY K P+ PD+ +V +AFD M + F D L+P L+ LF
Sbjct: 258 VLLDCGEGTFGQLCRHY-GQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLG----KPFQPLLVVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSN--TTLERL----ISLLLETCDLEEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIPLFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALF 517 The following BLAST results are available for this feature:
BLAST of EWM29531.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|