EWM29559.1, cds1126 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|585112130|gb|EWM29559.1| (separin [Nannochloropsis gaditana]) HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
Query: 1 MGMFAPPSRTRATLQPTLARLHKQISHAPSPSPLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLPSELVD 260
MGMFAPPSRTRATLQPTLARLHKQISHAPSPSPLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLPSELVD
Sbjct: 1 MGMFAPPSRTRATLQPTLARLHKQISHAPSPSPLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLPSELVD 260
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|298714769|emb|CBJ25668.1| (separin [Ectocarpus siliculosus]) HSP 1 Score: 152.525 bits (384), Expect = 2.785e-38 Identity = 90/204 (44.12%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 52 WKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
W G+ GEAPTEE + K L+E VF YCGHG+GEL + R+ VA L + P+A+LMGCSSGRL+ G FEP GMA SYL GSPAVV NLWDVTD+DIDRF VALLE K AS D G +G+ A + + AVA +R CK+ ++G APV YG+P
Sbjct: 2166 WSGVEGEAPTEETMAKTLQEVDVFAYCGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGDGD-------------------------------------FEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALLEAFVGKGGAS--------DGG---RGKPA-----STLAHAVAHSRAECKMPFIIGYAPVCYGIP 2316
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|926631173|ref|XP_013781306.1| (PREDICTED: separin-like [Limulus polyphemus]) HSP 1 Score: 135.191 bits (339), Expect = 5.944e-34 Identity = 77/229 (33.62%), Postives = 110/229 (48.03%), Query Frame = 0
Query: 27 HAPSPSPLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
+ +PS +P + + + W G++G+ P+ + L L E+ +F+YCGHGSG ++LA E + L+ ++LMGCSSG+L+ G + EPTG+ L Y GSP VV NLWDVTD+DIDRF +LLE P K A + + I A+ AR ACKL++L+G+APV YGLP
Sbjct: 190 YVLNPSNDIPHTQKKFEEVFKSMKGWNGIVGQKPSNQELASALTENDLFLYCGHGSGRVYLAGESIERLQCRSASVLMGCSSGKLKVFG------------------------------------QQLEPTGVVLQYWLGGSPCVVANLWDVTDKDIDRFTESLLELWLPNWK------------------NEAKDIQASFITAALPVARQACKLKYLIGSAPVIYGLP 364
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|1004137311|gb|KXZ45338.1| (hypothetical protein GPECTOR_56g435 [Gonium pectorale]) HSP 1 Score: 134.035 bits (336), Expect = 6.651e-32 Identity = 85/215 (39.53%), Postives = 109/215 (50.70%), Query Frame = 0
Query: 52 WKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDS--------KALILPAVARARGACKLRHLVGAAPVAYGLPSEL 258
W+G+ G+ P+ L L+ +F+Y GHGSGE FL + L++ +LMGCSSGRLR GA ++P+G A++YL AG PA+V NLWDVTDRDIDR+C ALL+ TA D G R ED +AL L AV+R+R ACKL HLVGAAPV YGLP ++
Sbjct: 1027 WQGVTGQKPSARALLAALQSHDIFLYLGHGSGEQFLPSPALRKLQRCAACVLMGCSSGRLRLHGA-------------------------------------YDPSGAAVAYLLAGCPALVANLWDVTDRDIDRYCQALLDAWLGCGPGLTAGDAETAGGGPSGGQGR--EDKADGPSCRREALGL-AVSRSRAACKLPHLVGAAPVTYGLPLQM 1201
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|302847749|ref|XP_002955408.1| (separase [Volvox carteri f. nagariensis] >gi|300259250|gb|EFJ43479.1| separase [Volvox carteri f. nagariensis]) HSP 1 Score: 130.954 bits (328), Expect = 8.991e-31 Identity = 88/228 (38.60%), Postives = 115/228 (50.44%), Query Frame = 0
Query: 33 PLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLV--LKGERAVED---SKALILPAVARARGACKLRHLVGAAPVAYGLP 255
P+L +QA+ WKG+ GE P+ + L L+ +F+Y GHGSGE +L + L++ +LMGCSSGRLR GA ++P+G A++YL AG PA+V NLWDVTDRDIDR+ AL+ AST + G+ K ER D S+ L L AV R+R ACKL HL+GAAPV YGLP
Sbjct: 1899 PILEAQAH-----------WKGITGERPSTQALLTALQSHELFLYFGHGSGEQYLPLPALRKLQRCASCMLMGCSSGRLRLHGA-------------------------------------YDPSGAAVAYLLAGCPALVANLWDVTDRDIDRYAQALMHSWL-GCTASTPSASTGSKCGMAGGAKRERPCSDVGPSEPLGL-AVTRSRSACKLTHLIGAAPVCYGLP 2076
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|1126205985|ref|XP_019636551.1| (PREDICTED: LOW QUALITY PROTEIN: separin-like [Branchiostoma belcheri]) HSP 1 Score: 127.872 bits (320), Expect = 1.148e-29 Identity = 70/204 (34.31%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 52 WKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
W G+ G +PT E L + +F+YCGHG+G+++L ++V + +LMGC SGRL G++ E GMAL+Y+ +G P++V NLWDVTDRDIDRF ALL+ DS + +L V+++R ACKLRHL+GAAPV YG P
Sbjct: 2124 WNGVAGVSPTTEQYISALTDHDMFVYCGHGAGQVYLKGDEVQKITTRATTLLMGCGSGRLFVEGST-------------------------------------EARGMALNYILSGCPSIVANLWDVTDRDIDRFLQALLKSWL-------------------------TSDSNSSLLEFVSQSREACKLRHLIGAAPVVYGFP 2265
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|223993699|ref|XP_002286533.1| (hypothetical protein THAPSDRAFT_260749, partial [Thalassiosira pseudonana CCMP1335] >gi|220977848|gb|EED96174.1| hypothetical protein THAPSDRAFT_260749, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.398 bits (298), Expect = 4.479e-29 Identity = 87/254 (34.25%), Postives = 118/254 (46.46%), Query Frame = 0
Query: 7 PSRTRATLQPTLARLHKQISHAPSP-SPLLPSQANQNHPKTQHREVWKGLIGEAPTEECLKKEL-EESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFE---PTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
PSR + L P K +S S P L S A +N + W+G+I E P+ E + + L EE+ +F+YCGHG GE +R V L + L GC SG F+S EL +G+ALSY+ AG+P VVGNLWDVTDRDIDR+C+ L+E+ F + ++ S + VA AR ACKLR++VG+APV YG+P
Sbjct: 53 PSRLKYVLDP-----EKNLSETASTLGPALNSLACKNGWE------WEGVISEMPSPEFMSQTLREENGLFLYCGHGGGENAFSRTQVEQLTRNDLE--SGCRSG--------------------------------------FSSAELHRGCRSSGIALSYIFAGAPCVVGNLWDVTDRDIDRYCLTLMEDFFNPSNDGSSP------------------RSSPFLSKCVADARRACKLRYIVGSAPVCYGIP 237
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|971517283|dbj|GAQ80926.1| (Regulator of spindle pole body duplication [Klebsormidium nitens]) HSP 1 Score: 124.405 bits (311), Expect = 1.768e-28 Identity = 78/206 (37.86%), Postives = 101/206 (49.03%), Query Frame = 0
Query: 52 WKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEE-LFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLPS 256
W+GL+ P+ E L L+E +F+Y GHGSGE FL + L+Q A+LMGCSSGRL G +EP G LSYL A SPAVV NLWDVTD DIDRF +L+ L P++ + ++ G + E + + I AVA R AC L L+GAAPV YG+P+
Sbjct: 2038 WQGLVNRLPSVEQLLTALQEHDLFVYLGHGSGEQFLPPRSLRRLRQCATALLMGCSSGRLTLRGD-------------------------------------YEPMGAVLSYLMAASPAVVANLWDVTDGDIDRFSKTVLQRWLQPRSGDGSDSENEQGGSRAKWRAEFELPPREECIGSAVADGRAACILPFLIGAAPVCYGVPT 2206
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|816349885|gb|KKK24924.1| (hypothetical protein AOCH_005982 [Aspergillus ochraceoroseus]) HSP 1 Score: 122.094 bits (305), Expect = 9.408e-28 Identity = 71/206 (34.47%), Postives = 96/206 (46.60%), Query Frame = 0
Query: 50 EVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
E W G++ P+E+ K LE ++F+Y GHGSG ++ V L Q + LMGCSSG L G +EP G ++YL AG+PA+V LWDVTD+DIDRF A E GL+ E + ED+K + AVA++R AC L++L GAAP YG+P
Sbjct: 1955 EGWNGIVNRQPSEDEFKDGLESQSLFLYFGHGSGAQYIRGRTVKRLDQCAVTFLMGCSSGTLTEAGE-------------------------------------YEPYGTPMNYLQAGAPALVATLWDVTDKDIDRFAKATFEHW-----------------GLLASKEESGEDTKVALDAAVAQSRQACVLKYLNGAAPAVYGVP 2106
BLAST of EWM29559.1 vs. NCBI_GenBank
Match: gi|816339601|gb|KKK18082.1| (hypothetical protein ARAM_005794 [Aspergillus rambellii]) HSP 1 Score: 122.094 bits (305), Expect = 1.043e-27 Identity = 71/206 (34.47%), Postives = 96/206 (46.60%), Query Frame = 0
Query: 50 EVWKGLIGEAPTEECLKKELEESTVFIYCGHGSGELFLAREDVATLKQAPLAILMGCSSGRLRAPGASSIKRGKGNEVPLPSNRRSSRDVGWIGRKIPFTSPELFEPTGMALSYLGAGSPAVVGNLWDVTDRDIDRFCVALLEELFPKAKASTATDEILGDEGLVLKGERAVEDSKALILPAVARARGACKLRHLVGAAPVAYGLP 255
E W G++ P+E+ K LE ++F+Y GHGSG ++ V L Q + LMGCSSG L G +EP G ++YL AG+PA+V LWDVTD+DIDRF A E GL+ E + ED+K + AVA++R AC L++L GAAP YG+P
Sbjct: 1955 EGWNGIVNRQPSEDEFKDGLESQSLFLYFGHGSGAQYIRGRTVKRLDQCAVTFLMGCSSGTLTEAGE-------------------------------------YEPYGTPMNYLQAGAPALVATLWDVTDKDIDRFAKATFEHW-----------------GLLASKEESGEDTKVALDAAVAQSRQACVLKYLNGAAPAVYGVP 2106 The following BLAST results are available for this feature:
BLAST of EWM29559.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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