EWM29524.1, cds1124 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|585112095|gb|EWM29524.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK 289 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK Sbjct: 1 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK 289
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|553195985|ref|XP_005856244.1| (methyltransferase type 11, partial [Nannochloropsis gaditana CCMP526] >gi|422292817|gb|EKU20119.1| methyltransferase type 11, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK 289 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK Sbjct: 39 MNISKHSPALNRPMIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAIFLRRPGDGRASK 327
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|545366285|ref|XP_005648050.1| (S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa subellipsoidea C-169] >gi|384250026|gb|EIE23506.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 138.658 bits (348), Expect = 6.974e-36 Identity = 87/239 (36.40%), Postives = 123/239 (51.46%), Query Frame = 0 Query: 26 QAEGYSAFRPNYPDALMAGVEVI--LRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWY-ASLDDVWDCDRALLDMEFAGTDYTP--FVQFSKQKVEE-THMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAAL 258 QA Y+A+RP YP L EVI DS +D+ TGSGQ L+R F +DQS QL A + N+EY A A +P GS ++VT AQA+HW D+P+F R V R+LRPEG GY A+AA+ Y +L W R L++ ++ G + P F + + ++ + MSV L+GYL +WS++ T++E HPD+ PD L +AA Sbjct: 11 QASSYAAYRPTYPSGLY---EVIYDFAKLASYDS-------ALDLATGSGQAAAVLSRKFQRVVALDQSEQQLKEAVRLPNIEYGHASAEETGVPGGSVNLVTVAQALHWFDLPAFYREVRRVLRPEGAFAAWGYDLCEFKGNDAANAALEALYNGTLGPYWSDRRRLIEKQYKGLEPGPEHFGEVKRVILDTMSAEMSVSALIGYLSSWSAYATYREQHPDL-PDPLIKFKGAYKAAF 238
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|1153996109|emb|SKB94624.1| (Methyltransferase domain-containing protein [Salegentibacter salinarum]) HSP 1 Score: 132.494 bits (332), Expect = 9.882e-34 Identity = 74/260 (28.46%), Postives = 125/260 (48.08%), Query Frame = 0 Query: 14 MIAKGDPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYAS-LDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEF 272 M+ D F + A Y+ FRP YP L + ++ D D TG+GQV +LA +F K D S QL NA K +N++Y A D + ++T AQA+HW + F + R+L+P G++ V+GY S P+ D + ++Y + WD +R LD ++ + PF + + ++ + S EHL+GYL+TWS+ K H + + + ++ L+ A + + + + P+ F Sbjct: 1 MLFMKDNFSTHSSA--YAKFRPTYPQKLYE----------FLQAKLTDTETAWDCGTGNGQVAGELAEFFQKVKATDISKQQLKNAVKKNNIQYSLQGAEKTNFQDNTFDLITVAQAIHWFNFKDFYKEAKRVLKPNGIIAVIGY--SLFNTTPETDEVIRKFYNDIIGPFWDEERRYLDEKYKNIPF-PFHEIETPEFQQEYQWSFEHLIGYLETWSAV---KHHEKETGENPVNLIKNELKTAFGS--QNKIVFPILF 240
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|1160870012|ref|WP_079714411.1| (SAM-dependent methyltransferase [Salegentibacter salinarum]) HSP 1 Score: 132.494 bits (332), Expect = 1.096e-33 Identity = 70/249 (28.11%), Postives = 120/249 (48.19%), Query Frame = 0 Query: 25 AQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYAS-LDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEF 272 + Y+ FRP YP L + ++ D D TG+GQV +LA +F K D S QL NA K +N++Y A D + ++T AQA+HW + F + R+L+P G++ V+GY S P+ D + ++Y + WD +R LD ++ + PF + + ++ + S EHL+GYL+TWS+ K H + + + ++ L+ A + + + + P+ F Sbjct: 7 THSSAYAKFRPTYPQKLYE----------FLQAKLTDTETAWDCGTGNGQVAGELAEFFQKVKATDISKQQLKNAVKKNNIQYSLQGAEKTNFQDNTFDLITVAQAIHWFNFKDFYKEAKRVLKPNGIIAVIGY--SLFNTTPETDEVIRKFYNDIIGPFWDEERRYLDEKYKNIPF-PFHEIETPEFQQEYQWSFEHLIGYLETWSAV---KHHEKETGENPVNLIKNELKTAFGS--QNKIVFPILF 237
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|831763162|ref|XP_012750790.1| (hypothetical protein SAMD00019534_094110, partial [Acytostelium subglobosum LB1] >gi|735851422|dbj|GAM26236.1| hypothetical protein SAMD00019534_094110, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 132.88 bits (333), Expect = 2.470e-33 Identity = 80/262 (30.53%), Postives = 133/262 (50.76%), Query Frame = 0 Query: 19 DPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNA-TKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASL--DDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEFSFFAI 277 D FG+ ++ Y FRP YP L +L+ R + DI G+GQ ++A++F+ G D SA Q+ +A + SNVEY + A + A ++T AQA HW D+P F V+RLL+P+G L++ Y I + +A +++Y++ D W +R L+D + PF +++++ T +S+ ++GY TWS + +KE + +P L L RL AAL A + T++ + F + I Sbjct: 41 DHFGK--VSDSYRTFRPTYPPELFE----VLKKHTANTPR----KLAFDIGCGTGQATVEIAKFFEKVIGFDPSAGQIGSAVSDSSNVEYKVSPAECIDYDGPKADLITVAQAAHWFDLPKFFGEVNRLLQPDGSLIIWCYGTCSITDNDEINAIHMDYYSNTLGDQYWPANRKLIDRNYEDI-IPPFPNTTREQISFTKTLSINSMIGYYGTWSGYNKYKEMNNGQDP--LPSLKQRLIAALGAGADENTMITLRFPVYFI 289
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|1120004508|ref|WP_072879635.1| (SAM-dependent methyltransferase [Salegentibacter echinorum] >gi|1110025955|emb|SHG20075.1| Methyltransferase domain-containing protein [Salegentibacter echinorum]) HSP 1 Score: 131.339 bits (329), Expect = 2.823e-33 Identity = 79/244 (32.38%), Postives = 121/244 (49.59%), Query Frame = 0 Query: 30 YSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYAS-LDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARLQAALAAEGEGRTLLPVEF 272 Y+ FRP YP L E I R +S D TG+GQV R+LA +F + D S QL NA K N+ Y + A PD S ++VT AQA+HW D SF V+R+L+P G + ++GY S Q DA + +Y + WD +R LD + + PF + ++ + S E L+GYL TWS+ + + E+ +NP ++++ L+ A + + + P+ F Sbjct: 12 YAKFRPTYPKELY---EFIKRNLEVTNS-------AWDCGTGNGQVARELAEFFSRVEATDISVQQLKNAIKKPNITYSRQPAEKTNFPDNSFNLVTVAQAIHWFDFDSFYTEVNRVLKPGGFITIIGY--SLFKSTAQTDAVIASFYKDIIGPWWDEERRYLDEHYKNLTF-PFNELEAPGFQKEYEWSFEQLIGYLKTWSAVKHY-ENAKGINP--VELIKTELKTAFGE--KNKVVFPILF 237
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|939363979|ref|WP_054908886.1| (MULTISPECIES: SAM-dependent methyltransferase [Pseudomonas] >gi|1042865239|gb|OBY92041.1| SAM-dependent methyltransferase [Pseudomonas sp. AU11447]) HSP 1 Score: 129.798 bits (325), Expect = 1.274e-32 Identity = 77/227 (33.92%), Postives = 117/227 (51.54%), Query Frame = 0 Query: 28 EGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARL 254 + Y+ FRP YP L + C+ S A D S+ VD+ GSGQ+ R+LA +F G D SA Q+ +A +N+ Y A A +PL D SAS++T AQA HW D+P F V R+ P+ VL ++ Y H+ P W + W +R L+D +A D+ PF +F ++ +++ +GY+ TWS+ R+ +E + D LQ +A L Sbjct: 17 QAYARFRPEYPAELAS----------CLASLAPDRSLAVDVGCGSGQLTRQLAEHFSSVAGFDPSAEQIAHAAPRANLSYACAQAEELPLADRSASLITAAQAAHWFDLPKFYAEVRRIAEPDAVLALISYGVLHLDGDPGKRFETFYW-QEIGPYWPAERKLVDSGYATLDF-PFAEFPGPEIAIRLEWTLDEFLGYVSTWSAVRSAREAGRE---DLLQHFAADL 228
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|746038294|ref|WP_039109918.1| (SAM-dependent methyltransferase [Flavobacterium sp. AED] >gi|742429834|gb|KIA85898.1| SAM-dependent methyltransferase [Flavobacterium sp. AED]) HSP 1 Score: 127.872 bits (320), Expect = 5.934e-32 Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 0 Query: 19 DPFGRPAQAEGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASL-DDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSS 231 D F + QA YS FRP YPD ++ + S K+ S+ +DI TG+GQV KL+R+F G+D S QL NA N+ Y A A + + ++T AQA+HW D F + + R+L+PEG+ VLGY +D + +Y ++ WD +R LD + + PF + + E + + E L+GYL+TWS+ Sbjct: 3 DNFSK--QALEYSKFRPQYPDEMI----------DYLVSFVKNKSIALDIATGNGQVAHKLSRFFKTVYGIDISQNQLDNAISAQNIIYKIAAAENTFFKNSEFDLITVAQAIHWFDFDLFYKEIYRILKPEGIFAVLGY--GLFATNADSDKIIQNFYYNIVGPYWDAERKYLDENYKTIPF-PFDEIVAKPFENHFIWTFEELIGYLETWSA 201
BLAST of EWM29524.1 vs. NCBI_GenBank
Match: gi|639926893|ref|WP_024763777.1| (MULTISPECIES: SAM-dependent methyltransferase [Pseudomonas] >gi|1042729448|gb|OBY57503.1| SAM-dependent methyltransferase [Pseudomonas sp. AU12215]) HSP 1 Score: 127.872 bits (320), Expect = 7.881e-32 Identity = 76/227 (33.48%), Postives = 116/227 (51.10%), Query Frame = 0 Query: 28 EGYSAFRPNYPDALMAGVEVILRAQGCMDSRAKDGSMLVDICTGSGQVLRKLARYFDHAKGVDQSAAQLTNATKGSNVEYLQADALSVPLPDGSASVVTCAQAMHWLDIPSFLRGVDRLLRPEGVLVVLGYPRSHIPKMPQADAAMIEWYASLDDVWDCDRALLDMEFAGTDYTPFVQFSKQKVEETHMMSVEHLVGYLDTWSSFRTWKEHHPDVNPDTLQVLSARL 254 + Y+ FRP YP L + C+ S A D ++ VD+ GSGQ+ R+LA +F G D SA Q+ +A +N+ Y A A +PL D SAS++T AQA HW D+P F V R+ P+ VL ++ Y H+ P W + W +R L+D +A D+ PF +F ++ ++ +GY+ TWS+ R+ +E + D LQ +A L Sbjct: 17 QAYARFRPEYPAELAS----------CLASLAPDRALAVDVGCGSGQLTRQLAEHFSSVVGFDPSAEQIAHAAPRANLSYACAQAEELPLADRSASLITAAQAAHWFDLPKFYAEVRRIAEPDAVLALISYGVLHLDGDPGKRFETFYW-QEIGPYWPAERKLVDSGYATLDF-PFAEFPGPEIAIRLEWTLHEFLGYVSTWSAVRSAREAGRE---DLLQHFAADL 228 The following BLAST results are available for this feature:
BLAST of EWM29524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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