EWM29549.1, cds1123 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|585112120|gb|EWM29549.1| (protein of unknown function DUF336 [Nannochloropsis gaditana]) HSP 1 Score: 322.398 bits (825), Expect = 1.264e-111 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 Query: 1 MLSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANLEGMFTEPVCHSLKEK 157 MLSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANLEGMFTEPVCHSLKEK Sbjct: 1 MLSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANLEGMFTEPVCHSLKEK 157
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|397620997|gb|EJK66045.1| (hypothetical protein THAOC_13052 [Thalassiosira oceanica]) HSP 1 Score: 140.969 bits (354), Expect = 3.727e-39 Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANLEGMFTEPVCHS 153 ++L A ++ + + GFAPI + V+D + I +RMD AAFP+F+ AKAFTC+++ S+R FRDKYT DP K Q+ M+ + MA FPGGV+++ G VVGA+GVSGA+ DEDEYCAL + + L G+ T+P HS Sbjct: 68 MNLELADKLADRVIETAKRNGFAPIVVSVLDSNANQIVQKRMDGPVHAAFPEFSRAKAFTCVTMKTSSREFRDKYTADGDPAKMLQLTSMMSI--ADMAAFPGGVLVKNMSGDVVGAIGVSGAAGDEDEYCALRSVWDSGL-GLTTQPTEHS 216
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|1199036710|ref|WP_087142404.1| (GlcG protein [Crenothrix polyspora] >gi|1148283030|emb|SJM90122.1| conserved hypothetical protein [Crenothrix polyspora]) HSP 1 Score: 107.842 bits (268), Expect = 4.768e-27 Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEA 139 L+L QA QI A+ AP+T+VV+D GH AMQR +D A + A AKA+ +++GVS+R+ T+A + M ++DV GG++ P PGGV+IR + ++GAVG+SG +D+DE+CA+AGIE+ Sbjct: 4 LTLKQANQIINTALNMARRLNMAPVTVVVLDVAGHLKAMQR-EDGASMIRQQIATAKAWGAVNMGVSSRSL---ATVAIQRPDF--MNALVDVAGGKIMPVPGGVLIRDSDNNLIGAVGISGDVSDQDEHCAIAGIES 135
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|1199041154|ref|WP_087146667.1| (GlcG protein [Crenothrix polyspora] >gi|1148277889|emb|SJM91751.1| conserved hypothetical protein [Crenothrix polyspora]) HSP 1 Score: 105.916 bits (263), Expect = 2.324e-26 Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 0 Query: 1 MLSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAA 140 +L+L A QI + A+ AP+TIVV+D GH AMQR +D A K A AKA+ +++GVS+R+ +A + M ++DV G++ P PGGV+IR +E +VGAVG+SG +D+DE CA+ GIEAA Sbjct: 3 VLTLKHANQIIQTALGKARQLNLAPLTIVVLDVAGHLKAMQR-EDGASMIRQKIATAKAWGAVNMGVSSRSL---AGVALQRPDF--MNALVDVAEGRIMPVPGGVLIRDKENNLVGAVGISGDVSDQDEQCAIVGIEAA 136
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|1212744984|ref|WP_088619573.1| (GlcG protein [Methylovulum psychrotolerans] >gi|1211200916|gb|ASF46701.1| GlcG protein [Methylovulum psychrotolerans]) HSP 1 Score: 103.605 bits (257), Expect = 1.805e-25 Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEA 139 L+L QA QI +A+A P+T+VV+D +GH A+QR +D A + A AKA+ +++GVS+R T+A+ + M +I + G++ P PGGV+IR + ++GAVG+SG +D+DE CA+AGIEA Sbjct: 4 LTLQQANQIINHAIAIARELNMNPLTVVVLDSSGHLKALQR-EDGASMIRQQIATAKAWGAVNMGVSSRGLE---TVAQQRPDF--MNALITIADGKIMPVPGGVLIRDADNHLLGAVGISGDKSDQDERCAIAGIEA 135
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|788041236|ref|WP_045778579.1| (heme-degrading domain-containing protein [Methylococcaceae bacterium Sn10-6] >gi|785927571|gb|KJV07206.1| GlcG protein [Methylococcaceae bacterium Sn10-6]) HSP 1 Score: 103.605 bits (257), Expect = 1.926e-25 Identity = 56/137 (40.88%), Postives = 86/137 (62.77%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIE 138 LSL QA QI A+ AP+T+VV+D GH AMQR +D A + A AKA+ +++GVS+R+ +A+ ++ M ++ ++ G++ P PGGV+IR E K++GAVG+SG +++DE CA+AGIE Sbjct: 4 LSLKQANQIINTAIHVARELNLAPLTVVVLDTAGHLKAMQR-EDGATVIRQQIAIAKAWGAVNMGVSSRSL---AAVAEKKPEF--MNALVSISDGKIMPVPGGVLIRDAENKLLGAVGISGDVSEQDERCAIAGIE 134
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|928976148|ref|WP_054000569.1| (heme-degrading domain-containing protein [Ahrensia marina] >gi|928223692|gb|KPA99856.1| GlcG protein [Ahrensia marina]) HSP 1 Score: 103.219 bits (256), Expect = 3.279e-25 Identity = 55/141 (39.01%), Postives = 90/141 (63.83%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANL 142 L+L++A +I +A+A G P+T+VV+D G IAMQR +D + P+ A KAF CI+ GV +R + A+ T+ + G+ +V+GG++ PGGV+++ + G+++GAVG++G ++D DE A+AGIE A L Sbjct: 4 LTLSKANKIIRDALAKGKELGLKPLTVVVLDAGGAMIAMQR-EDGSSHLRPEIAAGKAFGCIAAGVGSR-----WLNAQAETRPHFLEGLSNVSGGRIVAVPGGVLVKTKTGEIIGAVGITGDTSDNDETAAVAGIEGAGL 138
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|1088605462|gb|OHE21920.1| (GlcG protein [Syntrophus sp. GWC2_56_31] >gi|1088620075|gb|OHE34648.1| GlcG protein [Syntrophus sp. RIFOXYC2_FULL_54_9]) HSP 1 Score: 102.449 bits (254), Expect = 5.058e-25 Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANL 142 L+L++A QI + A+ FAP+T++V+D GH ++R D C+ P+ A KA+ + +G R + AK P + + D++GG+M P PGGV+IR+ G+++G+VG+SG ++D DE CA+ GI AANL Sbjct: 4 LTLSEANQIADKALEKGRELNFAPLTVIVLDAGGHTKVLKREDGCS-LLRPEIAMGKAWGTLGMGFGGRELARRG--AKMPGFFSAL---SDMSGGRMVPVPGGVLIRSEAGEILGSVGISGDTSDNDETCAVYGIRAANL 138
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|874095694|ref|WP_048649501.1| (heme-degrading domain-containing protein [Nitratireductor soli]) HSP 1 Score: 102.449 bits (254), Expect = 5.920e-25 Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAANLE 143 +SLAQA I + A+A +GFA +T+ V+DP GH +AM+R DD A +KA+ + +G S+R + AK P Y + ++V G++ P PGGV++ G ++GAVG+SG S D DE CA+AGIEAA L+ Sbjct: 4 ISLAQADTIIDTAIATRKREGFAALTVAVLDPGGHLVAMKREDDSG-ILRADIATSKAWGALGMGFSSREIGARA--AKAPAFYGAL---VEVARGRLVPGPGGVLVYDGGGMLIGAVGISGDSGDNDEVCAIAGIEAAGLK 139
BLAST of EWM29549.1 vs. NCBI_GenBank
Match: gi|652904467|ref|WP_027158700.1| (heme-degrading domain-containing protein [Methylobacter luteus]) HSP 1 Score: 101.679 bits (252), Expect = 1.209e-24 Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = 0 Query: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIRAREGKVVGAVGVSGASADEDEYCALAGIEAA 140 L+L +A QI + A AP+T+VV+D GH AMQR +D A + A AKA+ +++G+S+R+ + + P ++GM D G++ P PGGV+IR ++GAVG+SG +D+DE CA+AGIEAA Sbjct: 3 LTLEKANQIIQGATRKARQLKLAPLTVVVLDKAGHLKAMQR-EDGATVIRQQIATAKAWGAVNMGISSRSL--EAVAEQRPEFMSALVGMTD---GKIMPVPGGVLIRDEGNNLIGAVGISGDVSDQDERCAIAGIEAA 135 The following BLAST results are available for this feature:
BLAST of EWM29549.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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