EWM30547.1, cds112 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|585113214|gb|EWM30547.1| (putative fkbp-type peptidyl-prolyl cis-trans isomerase chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 457.218 bits (1175), Expect = 1.360e-162 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 Query: 1 MKVMISGWTLLFLPCASSFLAPSTLAITNKKDAIVLNEKGSPTVLEAEGGMSRRDALFKTAGLLSLGLAMGSSRGLISLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDLDSFDENAPASDDSDPNKGLRF 229 MKVMISGWTLLFLPCASSFLAPSTLAITNKKDAIVLNEKGSPTVLEAEGGMSRRDALFKTAGLLSLGLAMGSSRGLISLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDLDSFDENAPASDDSDPNKGLRF Sbjct: 1 MKVMISGWTLLFLPCASSFLAPSTLAITNKKDAIVLNEKGSPTVLEAEGGMSRRDALFKTAGLLSLGLAMGSSRGLISLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDLDSFDENAPASDDSDPNKGLRF 229
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|1210530012|dbj|GAX11545.1| (peptidylprolyl isomerase [Fistulifera solaris]) HSP 1 Score: 151.369 bits (381), Expect = 1.377e-42 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 0 Query: 84 AETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 AETLP G+TYEV +KG+GP P++GELAAIRF N DD++ T EP Y R+G LLKG+EE + +M++GDRW+LTIP ELAFG KGR AS GKPRI A + +D+ +V LPGRE E+I+L Sbjct: 51 AETLPNGVTYEVKKKGDGPQPEIGELAAIRFAAYNGANKIDDIFDTPEPYYTRIGSGGLLKGVEETLPLMRLGDRWELTIPSELAFGKKGRPASAGKPRIAGDAVITFDVEMVGLPGREIELIEL 175
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|1210528428|dbj|GAX12950.1| (peptidylprolyl isomerase [Fistulifera solaris]) HSP 1 Score: 150.599 bits (379), Expect = 2.770e-42 Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 0 Query: 85 ETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 ETLP G+TYEV +KG+GP P++GELAAIRF N DD+++T EP Y R+G LLKG+EE + +M++GDRW+LTIP ELAFG KGR AS GKPRI A + +D+ +V LPGRE E+I+L Sbjct: 50 ETLPNGVTYEVKKKGDGPQPEIGELAAIRFAAYNGANKIDDIFETPEPYYTRIGSGGLLKGVEETLPLMRLGDRWELTIPSELAFGKKGRPASAGKPRIAGDAVITFDVEMVGLPGREIELIEL 173
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|873240272|emb|CEL93612.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 140.969 bits (354), Expect = 9.480e-39 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0 Query: 90 GITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDLDSFDENAPASD 219 G+ Y VL+ G GP + G+L IRF G YK+ V DDL++T EP Y R G L+ G+EEA+ +M+VGDRWKL +PG LAFG +GRS +PG+PRIPP AP+EY++ +V +PG+ + +DL D + P SD Sbjct: 33 GLAYSVLKSGEGPKVEAGDLVVIRFRGQYKNIVIDDLFRTSEPYYARAAGGKLVAGLEEALLMMRVGDRWKLKVPGALAFGQQGRSPAPGRPRIPPNAPIEYEMLVVDIPGK-GDPLDLYFGDTDQPDSD 161
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|397571691|gb|EJK47918.1| (hypothetical protein THAOC_33332 [Thalassiosira oceanica]) HSP 1 Score: 141.354 bits (355), Expect = 1.470e-38 Identity = 80/203 (39.41%), Postives = 116/203 (57.14%), Query Frame = 0 Query: 9 TLLFLPC---ASSFLAPSTLAITNKKDAIVLNEKGSPTVLEAEGGMSRRDALFKTAGLLSLGLAMGSSRGLISLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 +L L C +++F+APS A+ T L A+ SR + L + + + + G+ P E LP G++ +V + GNGP P++GE+AAIRF +N DD+++T EP Y R+G L+KG+EE + M VGDRW LT+PG LAFG GR AS GKPRIP + +D+ +V LPG+E E+ID+ Sbjct: 4 CMLLLSCVAPSAAFVAPSGPAVN--------------TALAAQ--QSRTEFLRDVTATVGASVVVSTLGGM---PAYADEVLPSGVSIKVEKSGNGPAPEIGEMAAIRFRAFAGENKIDDIFETPEPYYTRIGSGGLIKGVEEVLPKMVVGDRWVLTVPGPLAFGPAGRKASAGKPRIPGNQEIIFDVEMVGLPGKEQELIDI 187
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|224001234|ref|XP_002290289.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973711|gb|EED92041.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 137.887 bits (346), Expect = 4.584e-38 Identity = 67/119 (56.30%), Postives = 86/119 (72.27%), Query Frame = 0 Query: 90 GITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 G+ +V++ GNGP P +GELAAIRF +N DD++ T EP Y RVG L+KG+EE + M+VGDRW LTIPGELAFG KGR AS GKPRIP A + +D+ +V LPG+E E+I+L Sbjct: 1 GVAIKVVKSGNGPEPGIGELAAIRFQSFAGENKIDDIFDTPEPYYTRVGSGGLIKGVEEVLPKMRVGDRWVLTIPGELAFGPKGRPASAGKPRIPSNAVITFDVEMVGLPGKEPELIEL 119
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|676380147|ref|XP_009033352.1| (hypothetical protein AURANDRAFT_17047, partial [Aureococcus anophagefferens] >gi|323456422|gb|EGB12289.1| hypothetical protein AURANDRAFT_17047, partial [Aureococcus anophagefferens]) HSP 1 Score: 136.346 bits (342), Expect = 1.389e-37 Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 0 Query: 90 GITYEVLEKG-NGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEV 205 G+ YEV++ NG IP++G+L AIRF G+ + VFDD+ KT EPLY+RVGG +L+KGI+EAV +M G+ W LTIPG+L FG KGRSAS GKPRIPP A + Y++ V PG E ++ Sbjct: 1 GLKYEVIKSNPNGAIPKIGDLIAIRFKGSTEGRVFDDITKTDEPLYYRVGGGSLIKGIDEAVTLMHYGETWGLTIPGDLGFGPKGRSASAGKPRIPPNAELYYEVQFVGFPGFEGDL 117
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|298707952|emb|CBJ30323.1| (putative FKBP-type peptidyl-prolyl cis-trans isomerase 2 [Ectocarpus siliculosus]) HSP 1 Score: 139.043 bits (349), Expect = 3.754e-37 Identity = 77/178 (43.26%), Postives = 109/178 (61.24%), Query Frame = 0 Query: 44 VLEAEGGMSR-RDALFKTAGLLSLGLAMGSSRGLI--SLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL---DSFDENA 215 L EGG + R L +T + L G+++ L+ S+ + T G+ L +G GP+ + G+L +RF G Y FD+++ T EP Y R G TL+KG+EEA+ +M+VGD+W+LT P LAFG KGR SPG+PRIPP A VEY L LVALPG+E ++++ D+F NA Sbjct: 48 ALSPEGGQGQSRGELLQT--VWKTALTAGAAQTLLASSVLAEDSLTTASGLKINKLVQGKGPVAEQGDLIGVRFKGNYGTYEFDNIFNTAEPYYMRAGVGTLVKGVEEALLMMRVGDKWQLTCPANLAFGNKGRPPSPGRPRIPPGADVEYTLELVALPGKEEDIVEQRTGDTFSGNA 223
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|551558614|ref|XP_005766282.1| (hypothetical protein EMIHUDRAFT_48468, partial [Emiliania huxleyi CCMP1516] >gi|485616523|gb|EOD13853.1| hypothetical protein EMIHUDRAFT_48468, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 134.035 bits (336), Expect = 1.263e-36 Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 0 Query: 90 GITYEVLEKGNGPIPQVGELAAIRFTGAYKDN--VFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 G+TY V++ G G P G+L AIRF G K + VFDD+ ++ E YFRVG ++L G+EEAVK+M GD W LTIPG+LAFG KGRSASPGKPRIP A + + L LVA+PG++ E++++ Sbjct: 1 GLTYNVIKSGKGGQPATGDLIAIRFKGTIKSSGQVFDDIMESAEAYYFRVGSGSVLPGVEEAVKLMHTGDVWDLTIPGKLAFGDKGRSASPGKPRIPSNAEIGFLLELVAVPGKDDELLEV 121
BLAST of EWM30547.1 vs. NCBI_GenBank
Match: gi|219118801|ref|XP_002180167.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408424|gb|EEC48358.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 133.265 bits (334), Expect = 2.692e-36 Identity = 65/121 (53.72%), Postives = 87/121 (71.90%), Query Frame = 0 Query: 90 GITYEVLEKGNGPIPQVGELAAIRFTGAYKD--NVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDL 208 G++Y V ++GNGP +VGEL AIRF D N DD++ T EP Y RVG L+KG+EE + +M++GDRW LTIPG++AFG KGR +S GKPRIP A + +DL +V LPG+E E+I+L Sbjct: 1 GVSYVVKKQGNGPQAEVGELVAIRFAAYVNDGQNKLDDIFDTPEPYYTRVGSGGLVKGVEEVLPMMRLGDRWVLTIPGDMAFGKKGRPSSAGKPRIPGDAVITFDLEMVGLPGKEQELIEL 121 The following BLAST results are available for this feature:
BLAST of EWM30547.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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