EWM29596.1, cds1116 (CDS) Nannochloropsis gaditana

Overview
NameEWM29596.1
Unique Namecds1116
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1225040..1225445 -
Alignment locationCM002456.1:1224186..1224934 -

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Properties
Property NameValue
Protein idEWM29596.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g50.8685.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1225040..1225445 -
CM002456.1supercontigCM002456.1:1224186..1224934 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29596.1 vs. NCBI_GenBank
Match: gi|585112167|gb|EWM29596.1| (hypothetical protein Naga_100006g50 [Nannochloropsis gaditana])

HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 
Query:    1 MSRNVFYRPKIPRRKCACGWALAAAFLGCPFVVRGQPSATRLLTIPCTLVVPGNQQKADPVYGLTECYHATVCIDQPVASDVIRPPPTILPSNRSTPSATPQALGIGKSSPREVSQNERDVGGIESPFLGSGVESDNQPIEREDIPALEPEMGSSRSRAFGIKPLRDSGDGNMYGGQKEVIRQEKDKAEASSTTESSEWDFRRQRFRGSQIGMEKDIFEGDTGKGGSTGFTGQEVSGRASLKDAAGAVAESVEMKDDDAADVENPQDVGQGEEGAGTVPGTGIDGDPDVTGLDPGPDAGDNGSNDNQADSTTSEVPSVDIPTPSPDPAAPPDVADLGLVGEIAIVRVCSREVVCQECGPVNVVPRCTCSLVLYNPLTDPDYFLK 384
            MSRNVFYRPKIPRRKCACGWALAAAFLGCPFVVRGQPSATRLLTIPCTLVVPGNQQKADPVYGLTECYHATVCIDQPVASDVIRPPPTILPSNRSTPSATPQALGIGKSSPREVSQNERDVGGIESPFLGSGVESDNQPIEREDIPALEPEMGSSRSRAFGIKPLRDSGDGNMYGGQKEVIRQEKDKAEASSTTESSEWDFRRQRFRGSQIGMEKDIFEGDTGKGGSTGFTGQEVSGRASLKDAAGAVAESVEMKDDDAADVENPQDVGQGEEGAGTVPGTGIDGDPDVTGLDPGPDAGDNGSNDNQADSTTSEVPSVDIPTPSPDPAAPPDVADLGLVGEIAIVRVCSREVVCQECGPVNVVPRCTCSLVLYNPLTDPDYFLK
Sbjct:    1 MSRNVFYRPKIPRRKCACGWALAAAFLGCPFVVRGQPSATRLLTIPCTLVVPGNQQKADPVYGLTECYHATVCIDQPVASDVIRPPPTILPSNRSTPSATPQALGIGKSSPREVSQNERDVGGIESPFLGSGVESDNQPIEREDIPALEPEMGSSRSRAFGIKPLRDSGDGNMYGGQKEVIRQEKDKAEASSTTESSEWDFRRQRFRGSQIGMEKDIFEGDTGKGGSTGFTGQEVSGRASLKDAAGAVAESVEMKDDDAADVENPQDVGQGEEGAGTVPGTGIDGDPDVTGLDPGPDAGDNGSNDNQADSTTSEVPSVDIPTPSPDPAAPPDVADLGLVGEIAIVRVCSREVVCQECGPVNVVPRCTCSLVLYNPLTDPDYFLK 384
The following BLAST results are available for this feature:
BLAST of EWM29596.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112167|gb|EWM29596.1|0.000e+0100.00hypothetical protein Naga_100006g50 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1117rna1117Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications