EWM29608.1, cds1114 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|585112179|gb|EWM29608.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 585.489 bits (1508), Expect = 0.000e+0 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query: 1 MAHMEKTDRPMNKLKKDETTTGPSPVSVTRTISSPARKYRAKPLSKQDVISNESLHFWRKKYEDMIHYVRESGVSVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPYTFVPPLDE 284
MAHMEKTDRPMNKLKKDETTTGPSPVSVTRTISSPARKYRAKPLSKQDVISNESLHFWRKKYEDMIHYVRESGVSVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPYTFVPPLDE
Sbjct: 1 MAHMEKTDRPMNKLKKDETTTGPSPVSVTRTISSPARKYRAKPLSKQDVISNESLHFWRKKYEDMIHYVRESGVSVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPYTFVPPLDE 284
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|585104785|gb|EWM23633.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 93.2041 bits (230), Expect = 6.829e-19 Identity = 58/204 (28.43%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 79 ADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAE--GRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPYTFVP 280
A + ++ R L ++ A+ E WR +NLPI + L L+ G+F F G D GR + YY + H+P+ + ++ + Y E++ AE ++G +V D + N D EF++ + YP L++ V F R +W N + FLD + S ++ ++L D+I E EL+ GGK + F P
Sbjct: 39 AKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKG---FTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMW-NTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDP 238
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|1134868678|gb|OMJ67334.1| (hypothetical protein SteCoe_35521 [Stentor coeruleus]) HSP 1 Score: 88.5817 bits (218), Expect = 3.001e-17 Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 64 DMIHYVRESGVSVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP--IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMD---IEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGK 273
D+ + V E + + D ++R+L + V+ A +K WRK+ I E+ +KTGK F G D GR R ++H P QF+ ++++ V+YL E+ R +ICV+ DR D SAN D IE K L ML++ Y R +L VN+++ I++ + L+ K+R+ H+L++ + L + +L+ GG+
Sbjct: 17 DLTNLVHEITDEEKYTNQDMLLRVLRARDLKVQAAYEMWQKWYKWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFSLEETMRYVIYLVEQGVKLADERHTGQICVIYDRGDISSANKDGNLIELGKSLAAMLQDFYAERLGAVYILHVNWLYWLIFQ-AIKPLLNKKTRNKMHILRNAEGLKEHFHPSQLMVEYGGE 230
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|1134886566|gb|OMJ83991.1| (hypothetical protein SteCoe_14977 [Stentor coeruleus]) HSP 1 Score: 85.8853 bits (211), Expect = 2.715e-16 Identity = 64/207 (30.92%), Postives = 104/207 (50.24%), Query Frame = 0
Query: 79 ADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP--IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMD---IEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGG----KLPY 276
+ D +IR+L + V+ A +K WRK+ I E+ +KTGK F G D GR R ++H P QFA ++++ V+YL E+ + ++CV+ DR D SAN D IE K L ML++ Y R +L VN+++ I++ V L+ K+R+ H+L++ + L + +L+ GG + PY
Sbjct: 32 TNQDMLIRVLRARDLKVQPAYEMWQKWYRWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFALEETMRYVIYLVEQGVKLADEKHTGQMCVIYDRGDISSANKDGNLIELGKGLAAMLQDFYAERLGAVYILHVNWLYWLIFQ-AVKPLLNKKTRNKIHILRNVEGLKEHFNPSQLLVEYGGENEFRCPY 237
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|1072956179|ref|XP_018488989.1| (PREDICTED: random slug protein 5-like [Raphanus sativus]) HSP 1 Score: 82.8037 bits (203), Expect = 6.601e-15 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 75 SVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP---IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRL-RGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKK---ELLDFIEEGELVEWLGGKLPYT 277
S ++ DD + R L + +++ A + K AWRK LP IP +E+ L K G+DK GR I HNP + P + + VVY E++ A R+ RG E+ +VD +N DI + L++ YP R + + +IF W+ ++ F+D K+R +++KK LL+ I E +L + GGK+P T
Sbjct: 54 STKEVDDLMIRRFLRARDMDIEKASVLFLKYLAWRKTVLPKGHIPESEIANDLSHNKVCMQGHDKKGRPILVIVGNRHNPSKGNPEEFKRFVVYALEKICA--RIPRGEEKFRAIVDLQGWGYSNCDIRGYLAALSTLQDCYPERLDKLYFVRAPYIFMTAWK-VIYPFVDTKTRKKIVFVENKKLTPTLLEDINETQLPDIYGGKMPLT 260
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|954189045|gb|KRX01853.1| (Thioredoxin-like fold [Pseudocohnilembus persalinus]) HSP 1 Score: 84.7297 bits (208), Expect = 9.727e-15 Identity = 58/207 (28.02%), Postives = 102/207 (49.28%), Query Frame = 0
Query: 80 DDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP--IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKL---LYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPYTFVPP 281
++++++R + N K+A EK W +N + ++L LK GK GYDK G I +V+ H P+Q ++ K +Y+ E G+E I ++ DR S N D +F+ L L M++++Y R + ++L NF F+ I+ + VFL +++ H+ K+ LL I+ +L+E GG + + P
Sbjct: 57 NENQLVRQFIARDYNEKNAFKLWEKWANWMLQNKADDLLEKDILNELKIGKAFMNGYDKKGNPIIIIQVRKHIPKQVPLDETKKFFIYMINLALEEADRIGSERITLLWDRKGFTSKNYDSDFLSLGKELVGMMQDTYAERLDSMIILYPNFFFKMIY-GIFKVFLTKRTKDKIHVYSKKENLLKLIDSSQLLEEHGGSSHFQYNFP 262
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|923922547|ref|XP_013730459.1| (PREDICTED: random slug protein 5-like isoform X1 [Brassica napus]) HSP 1 Score: 81.6481 bits (200), Expect = 1.267e-14 Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 0
Query: 75 SVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP---IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKK---ELLDFIEEGELVEWLGGKLPYT 277
S ++ DD + R L + +++ A K AW+K LP IP +E+ L K G+DK+GR I HNP + P + + VVY E++ A RG E+ +VD +N DI + L++ YP R + + +IF W+ ++ F+D +R +++KK LL+ I+E +L + GGK+P T
Sbjct: 48 STKEVDDLMIRRFLRARDMDIEKASTLFLKYLAWKKTVLPKGHIPESEIANDLSHNKVCMQGHDKMGRPIVVAFGNRHNPSKGNPEEFKRFVVYTLEKICAR-MPRGEEKFRAIVDLQGWGYSNCDIRGYLAALSTLQDCYPERLDKLYFVRAPYIFMTAWK-VIYPFVDTNTRKKIVFVENKKLTPTLLEDIDEAQLPDIYGGKMPLT 254
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|829171967|ref|XP_012653198.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|586737512|gb|EWS74225.1| divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 81.2629 bits (199), Expect = 3.489e-14 Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 103 EKGRAWRKENLPI----PRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAE-EICVVVDRTDAKSANMD---IEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGG 272
EK W +E P + + L TGK + +D R YYR+K+H P+ + +SV+ +++ E+ EG G+E ICV+ DR D ++ M+ L +L++ YP R +F VLG N+ +R ++ +V+ F+ K+ +L + ELL F + L++ GG
Sbjct: 73 EKWIKWHQEYRPDLISDKESTIQKQLSTGKLFWHKFDNERRPCLYYRMKYHVPKLASVEESVRFFLFMLEQGIKEGIKLGSEGTICVIYDRRGYTKKQYDENAMKTMRALVPILQDYYPERLSMFYVLGANWFYRAAFK-VVATFMSEKTSKKVKVLGEDSELLQFFNKQNLIKEYGG 249
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|685370022|ref|XP_009118825.1| (PREDICTED: random slug protein 5-like [Brassica rapa]) HSP 1 Score: 80.4925 bits (197), Expect = 4.091e-14 Identity = 62/209 (29.67%), Postives = 100/209 (47.85%), Query Frame = 0
Query: 75 SVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLP---IPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKK---ELLDFIEEGELVEWLGGKLPYT 277
S ++ DD + R L + +++ A K AW+K LP IP +E+ L K G+DK GR I HNP + P + + VVY E++ A RG E+ +VD +N DI + L++ YP R + + +IF W+ ++ F+D +R +++KK LL+ I+E +L + GGK+P T
Sbjct: 48 STKEVDDLMIRRFLRARDMDIEKASALFLKYLAWKKTVLPKGHIPESEIANDLSHNKVCMQGHDKKGRPILVIVGNRHNPSKGNPEEFKRFVVYTLEKICAR-MPRGEEKFRAIVDLQGWGYSNCDIRGYLAALSTLQDCYPERLDKLYFVRAPYIFMTAWK-VIYPFVDTNTRKKIVFVENKKLTPTLLEDIDEAQLPDIYGGKMPLT 254
BLAST of EWM29608.1 vs. NCBI_GenBank
Match: gi|1134805870|gb|OMJ15582.1| (CRAL-TRIO domain-containing protein [Smittium culicis]) HSP 1 Score: 80.4925 bits (197), Expect = 1.432e-13 Identity = 62/224 (27.68%), Postives = 102/224 (45.54%), Query Frame = 0
Query: 72 SGVSVEDADDDEVIRLLA--EWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLP----------TLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAEEICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGG--KLPYTFVPP 281
S + D D ++R L +WN N +L EK WR +N R L LK+G G DK+ I Y V+ + +++K VY+ E R + E + ++VD D N ++EF K+ L + YP EL ++ +++F+ IW N++ LD S + K+K++LL F + +L+E GG K + ++PP
Sbjct: 105 SDTCLNDTPDSMLLRFLRARKWNVNASFEML--EKCLIWRAQN----RINELVWYGESHLNYRYLKSGLGYLNGVDKLNNPILYIPVRVFISNNQSTKEALKNTVYVMENARLFLSPQ-VERVSIIVDTADMGLKNFEMEFFKMFLKFLSDYYPESLELVVIYSSSWVFKSIW-NMIKGLLDPVVASKIYFSKNKEDLLKFFDPDQLLEEYGGTNKNKFNYIPP 320 The following BLAST results are available for this feature:
BLAST of EWM29608.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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