EWM29587.1, cds1113 (CDS) Nannochloropsis gaditana

Overview
NameEWM29587.1
Unique Namecds1113
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1219411..1221012 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29587.1
Products-adenosylmethionine:trna ribosyltransferase-isomerase
Orig transcript idgnl|cribi|Naga_100006g53.8676.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1219411..1221012 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0008616queuosine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016853isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR003699QueA
Homology
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|585112158|gb|EWM29587.1| (s-adenosylmethionine:trna ribosyltransferase-isomerase [Nannochloropsis gaditana])

HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0
Query:    1 MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD 533
            MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD
Sbjct:    1 MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD 533          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|545708281|ref|XP_005706453.1| (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria] >gi|452822918|gb|EME29933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria])

HSP 1 Score: 329.331 bits (843), Expect = 1.000e-103
Identity = 195/456 (42.76%), Postives = 257/456 (56.36%), Query Frame = 0
Query:   43 FELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASS-----LVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPA 493
            F++ P+ D DY LPE  IA  P  PRDAS LLV+   S         T + D  FR L  FLP  ++L+ N S+VI ARL MRK  TGG  EVLC+ P++ +   ++      N   W C + G+N+K G++L L       L  +++ +  ++ L+RF+W     G+E    F D+LE  G IPLPPYM R     D   YQTVYAT  GSVAAPTAGLHFT  LL +L    + +    +TLHVGAGTF P+  + V +H MH ER  V + AL+ L E     RP V VGTTSVRTLETLYW G +L+++     S Q P+         +LSL QW  Y   +      +S     L   +  L+AL    +    D + G T+L+I P Y F + D +ITNFHQPRSTLL+LV AFLG    +  +YRHAL +  YRFLS+GD +L+  P 
Sbjct:   49 FDITPS-DYDYQLPEDRIALSPTTPRDASKLLVAVCGS--------GTVIADSTFRNLDKFLPDNAVLISNDSKVIAARLFMRKVETGGLVEVLCLDPITKTTLESLEAV---NSCEWLCFVRGKNVKPGTQLFLDDMES-PLKAEIQEKYEREALIRFTWNS---GREYK--FRDILEKHGIIPLPPYMKRNVTKDDRTSYQTVYATNEGSVAAPTAGLHFTPQLLSKLEQ--KNVSLVRVTLHVGAGTFSPIVTESVSKHDMHDERFHVTLTALKQLKENCQQSRPFVAVGTTSVRTLETLYWIGYQLITS-EDFRSRQCPT--------EDLSLSQWFPYERESSLMQTNTSACNSHLPTRMEILDALISWLEERACDSIMGRTKLIIVPNYPFFMVDAMITNFHQPRSTLLMLVAAFLGDRSALFHVYRHAL-EHDYRFLSYGDGSLLASPV 474          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|662567828|gb|KER08990.1| (hypothetical protein HY22_14415 [Chlorobium sp. GBChlB])

HSP 1 Score: 323.168 bits (827), Expect = 3.681e-102
Identity = 195/450 (43.33%), Postives = 266/450 (59.11%), Query Frame = 0
Query:   49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAG---SRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPT--FGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLI----EATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLM 489
            +D DY LP  CIAK P   RD S LLV+DA         +   +    F ELP  LP+K+LL+ N ++VI+ARL ++K+ +GGK E+LCI     S D A  L   ++ +VW+C+IGGR ++ G   S+  L     + L+ ++  +   +  VRF W        SP    F  VLE +G++PLPPY+ R +D +D   YQTVYA   GSVAAPTAGLHFT ++  +LR   + I+   LTLHVG GTF+P+   +V +HAMH ERI VP D L  L+         G  M+ VGTTSVRTLETLYW+GVRL         A++     + + +    L QWD+Y       +   +L  A  +L+ L + A+  G+  + GETQL IAPGY++ALCDG+ITNFHQP STL+LLV  FLG      ++Y  AL  G YRFLS+GD++L+
Sbjct:   13 SDYDYDLPAECIAKFPLAERDQSKLLVADA---------LTGRLEHRRFFELPDLLPSKALLICNNTKVISARLHLQKQ-SGGKVEILCIESAEASPDNAFGLME-TDGAVWKCLIGGR-VREGMELSKAGLFNGKPIFLSAKILPKTNGETQVRFQW--------SPQCLPFVAVLETLGQVPLPPYLKRDADESDKVRYQTVYAKQGGSVAAPTAGLHFTDAVFDRLRE--KSIDIAELTLHVGLGTFKPIESADVADHAMHGERIAVPKDTLNKLLAQLERRKDGGGKMIAVGTTSVRTLETLYWFGVRL---------AKKDGDARNSNHIM---LSQWDSYRL-----SDGGTLPDASESLKTLVEWAEQRGLSTISGETQLFIAPGYQYALCDGIITNFHQPHSTLILLVATFLGK-SLWKKVYDEALQNG-YRFLSYGDASLL 421          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1082376754|gb|OFX35006.1| (S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWA2_42_15] >gi|1082455725|gb|OFY01159.1| S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWE2_42_39] >gi|1082497628|gb|OFY42002.1| S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWF2_42_66])

HSP 1 Score: 319.316 bits (817), Expect = 6.640e-101
Identity = 179/445 (40.22%), Postives = 252/445 (56.63%), Query Frame = 0
Query:   50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGG-RNIKAGS---RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMI 490
            D +YPLP+  IAK P   RD S LLV    S+            D IF ELP  LP  SLL+ N ++VI ARLL  KE TG + E+ C+ P  PS D  IA    +    W+CMIG  +  K G+    +++  EN + L  +  + + +D ++RF W +          F  ++E  G +P+PPY+NR ++ +DLQ YQTVY+  +GSVAAPTAGLHFT  + Q++R    Q E   LTLHVGAGTFQPV  + +  H MH E+I +P   +E L++  G   P + VGTT++RTLE++YW G ++ +               S   ++NL + QW+        P Q +  +    +L+A+    K    DH    T+++I PGY F + DG++TNFHQP+STLLLLV AFLG       +Y HAL + +YRFLS+GDSNL +
Sbjct:   16 DFNYPLPDEKIAKYPLPQRDQSKLLVWKNHSIE-----------DRIFSELPDLLPTNSLLIFNNTKVIRARLLFEKE-TGARIEIFCLDPHEPS-DYQIAFQQ-TKTCTWKCMIGNLKKWKEGTLKKSIIIEGEN-VELCAEKISSDRQDNIIRFIWNNVHF------EFSKIIEHAGILPIPPYLNRETEESDLQRYQTVYSKIKGSVAAPTAGLHFTEEVFQRIREKGYQTEE--LTLHVGAGTFQPVKSETIEAHRMHAEQIYIPQQLIERLLKHRG---PRIAVGTTTIRTLESIYWLGTQITTG--------------SVSDISNLKISQWE--------PYQGTKKIEVNESLQAILSFMKSRQTDHFSASTEIIIVPGYEFTIIDGMLTNFHQPQSTLLLLVSAFLGENWKT--VYNHAL-QNNYRFLSYGDSNLYL 409          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1098074098|emb|SFH24426.1| (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter chinhatensis])

HSP 1 Score: 315.079 bits (806), Expect = 2.664e-99
Identity = 182/443 (41.08%), Postives = 256/443 (57.79%), Query Frame = 0
Query:   49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
             D  Y LPE  IAK P   RD S LL+                  D  F ELP+ LP  +LLV N ++V+ ARLLM+KE TGG  E+ C+ PV+P  +  +A+   +    W+C++G      G  + L  E G+ L  + EA++    L+ F+W      +++  TF +VLE  G++PLPPY+NR     D   YQT+YA+ +G+VAAPTAGLHFT  ++  L+   Q I+T YLTLHVGAGTF+PV  + +  H MH E++ +    LE L++  G+  P++PVGTTS+R+LE++YW G ++L+                E +   L + QW AY      PT       A  ALEAL      +G DH+   TQ++IAPGY F +C GL+TNFHQP STLLLLV A +G      ++Y+HAL+   YRFLS+GDS+L++P
Sbjct:   10 KDFVYDLPEERIAKFPLPVRDQSKLLLYRQGQF-----------IDHTFTELPTLLPPDTLLVFNDTKVVQARLLMQKE-TGGLVEIFCLEPVAPHREVQLAMQQ-TGSCTWKCLVGNNKRWKGGLVHLYFEGGV-LQAEREAQQEGHFLIHFTW------RQAELTFAEVLERCGRLPLPPYLNRDLTPEDHTRYQTIYASQQGAVAAPTAGLHFTDRVMDALK--AQGIDTAYLTLHVGAGTFKPVKSETMEAHEMHAEQVYISRSILERLLKQQGN--PVIPVGTTSMRSLESIYWLGAKVLAQ--------------PELTQQELHVSQWQAYE-SINQPT-------AAQALEALLHYLDRQGTDHLHANTQIIIAPGYTFRMCHGLVTNFHQPESTLLLLVSALIG--EDWRKVYQHALAH-DYRFLSYGDSSLLLP 403          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1121635101|ref|WP_073853351.1| (S-adenosylmethionine tRNA ribosyltransferase [Pontibacter sp. S10-8] >gi|1118108773|gb|OKL39444.1| S-adenosylmethionine tRNA ribosyltransferase [Pontibacter sp. S10-8])

HSP 1 Score: 313.153 bits (801), Expect = 1.509e-98
Identity = 185/445 (41.57%), Postives = 256/445 (57.53%), Query Frame = 0
Query:   49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVP--AVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
             D  Y LPE  IAK P   RD S LL+     ++           D  F +LP+ LP  +LLV N +RV+ ARLL++KE TGG  E+ C+ PV+P  +  +A+   +  S W+C++G         + L  E G+ L  + EA++    L+RF+W      + +  TF +VLE  G++PLPPY+NR     D   YQT+YA  +G+VAAPTAGLHFT  +L  L    Q I T YLTLHVGAGTF+PV    +  H MH E++ +    LE L++    G+P++PVGTTS+R+LE+++W G ++L         Q+P     E     L + QW AY           S+ P  A  AL+AL D    + VDH+   TQ++IAPGY F +C GL+TNFHQP STLLLLV A +G       +YRHAL+   YRFLS+GDS+L++P
Sbjct:   10 KDFVYELPEERIAKFPLPERDQSRLLLYQKGQIT-----------DHTFTDLPALLPPHTLLVFNDTRVVQARLLLQKE-TGGLVEIFCLEPVAPHREVQLAMQQ-TGHSTWKCLVGNNKRWKSGPVRLYFEGGM-LQAEREAQQEGHFLIRFTW------EPAELTFAEVLERCGRLPLPPYLNRDLTPDDHTRYQTIYANQKGAVAAPTAGLHFTDRVLAAL--ASQSIATAYLTLHVGAGTFKPVKSDTMETHEMHAEQLYISKRILERLLQQ--QGKPVIPVGTTSMRSLESIFWLGAKVL---------QQP-----ELPPQELHVSQWQAY----------ESINPPSATEALQALLDYMDRQRVDHLHASTQIIIAPGYTFRMCQGLVTNFHQPESTLLLLVSALIG--ENWRNVYRHALAH-DYRFLSYGDSSLLLP 403          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1057342948|ref|WP_068703520.1| (S-adenosylmethionine tRNA ribosyltransferase [Paludibacter jiangxiensis] >gi|1015804768|dbj|GAT62844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Paludibacter jiangxiensis])

HSP 1 Score: 311.997 bits (798), Expect = 3.762e-98
Identity = 190/449 (42.32%), Postives = 258/449 (57.46%), Query Frame = 0
Query:   49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIK-----AGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPP-TFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
            ++ +Y LP+  IAK P   RDAS LL+ +  ++S +            FR L  +LP K+LLV N +RV+ AR+L  KE TG + EV C+ P SPS D A+A      +  W CMIG  N+K     A +R        + LT +     G    V+FSW       +SP  TF D+LEDVG++P+PPY+NR ++ +D + YQTVYA   GSVAAPTAGLHFT ++L+ L      I +  +TLHVGAGTFQPV  K +G+H MH E I V  D LE L+   GS   +V VGTTSVRTLE+LY+ G +L               +LS D+     + QW+ Y+  A +P+          AL AL D      +  +   TQ++IAPGY+F L  G+ITNFHQP+STLLLL+ AF+G      +IY +A     +RFLS+GDS+L++P
Sbjct:   11 DEYNYLLPDERIAKFPLAERDASKLLIYNKGNISESR-----------FRNLVDYLPEKTLLVRNNTRVVQARVLFFKE-TGARIEVFCLEPHSPS-DYAVAFQQ-REQCEWTCMIG--NLKKWKEGALTRRFEVDGTSVTLTAERIDSSGLSHTVKFSW-------DSPSLTFADILEDVGELPIPPYLNRETEESDKETYQTVYAKIEGSVAAPTAGLHFTDAVLEDLEK--HAIRSTEVTLHVGAGTFQPVKSKSIGDHTMHSEMISVTKDTLEELLRNLGS---IVAVGTTSVRTLESLYFLGRQL---------------ILSPDTF-QFQVKQWEPYNSTALYPSTE-------EALSALIDYMNAHKLQKLNAATQIIIAPGYKFRLISGMITNFHQPKSTLLLLISAFVG--ADWKKIYNYAFD-NEFRFLSYGDSSLLLP 405          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1000906097|ref|WP_061156698.1| (S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis] >gi|987481521|gb|KXC08635.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis])

HSP 1 Score: 306.605 bits (784), Expect = 5.496e-96
Identity = 189/444 (42.57%), Postives = 253/444 (56.98%), Query Frame = 0
Query:   50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGG-RNIKAGS-RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
            D DYPLPE  IAK     RDA  LLV D   +            D +F +L   LP+ S+LV N +RVI ARLL RK  TG   EV C+ PVSP+    ++LTA  +  VW CM+G  +  ++G  ++ + +  G  +          DG +RFSW +  +      TFG++LE  G +P+PPY+NR ++  DL+ YQTVYA  +GSVAAPTAGLHFT    ++LR   Q      +TLHVGAGTF+PV  + +GEH MH E I +   +LE L +  GS   +V VGTTSVRTLE+LYW G  L +A              S  S  +L + QW+AY             +    A+  + D    +GV+ +   T+++IAPGYR+ + D +ITNFHQPRSTLLLLV AF+G  G    +Y HAL  G YRFLS+GD +L+IP
Sbjct:   11 DYDYPLPEERIAKHALPQRDACKLLVYDKGEIK-----------DAVFSQLSEVLPSGSMLVRNNTRVIRARLLFRK-STGATIEVFCLEPVSPA-QYELSLTARGS-CVWHCMVGNAKRWRSGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHY------TFGEILEMAGILPIPPYLNRDTEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLR--AQGTPVVDVTLHVGAGTFRPVKSETIGEHRMHRELIVIERSSLEALRDWQGS---VVAVGTTSVRTLESLYWLGRSLSTA--------------SHTSQESLKVNQWEAYE-------NEDVALSRSEAIRIILDWMDEQGVETLIFPTEILIAPGYRYRMVDAMITNFHQPRSTLLLLVSAFIG--GDWKAVYHHALESG-YRFLSYGDGSLLIP 405          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|564602847|ref|WP_023847696.1| (S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis] >gi|563394634|gb|ETA25809.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis SJD2] >gi|1209744912|gb|OWR81209.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis SJD5])

HSP 1 Score: 306.22 bits (783), Expect = 8.272e-96
Identity = 192/444 (43.24%), Postives = 255/444 (57.43%), Query Frame = 0
Query:   50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIG-GRNIKAGS-RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
            D DYPLPE  IAK     RDA  LLV D   +            D +F +L   LP+ S+LV N +RVI ARLL RK  TG   EV C+ PVSP+    ++LTA  +  VW CM+G  +  ++G  ++ + +  G  +          DG +RFSW +  +      TFG++LE  G +P+PPY+NR ++  DL+ YQTVYA  +GSVAAPTAGLHFT    ++LR   Q      +TLHVGAGTF+PV  + +GEH MH E I +   +LE L +  GS   +V VGTTSVRTLE+LYW G  L +A              S  S  +L + QW+AY         A S   A+  + A  D    +GV+ +   T+++IAPGYR+ + D +ITNFHQPRSTLLLLV AF+G  G    +Y HAL  G YRFLS+GD +L+IP
Sbjct:   11 DYDYPLPEERIAKHALPQRDACKLLVYDKGQIK-----------DAVFSQLSEVLPSGSMLVRNNTRVIRARLLFRK-STGATIEVFCLEPVSPA-QYELSLTARGS-CVWHCMVGNAKRWRSGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHY------TFGEILEMAGILPIPPYLNRDTEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLR--AQGTPVVDVTLHVGAGTFRPVKSETIGEHRMHRELIVIERSSLEALRDWQGS---VVAVGTTSVRTLESLYWLGRSLSTA--------------SHTSQESLKVNQWEAYEN----EDAALSRSEAIRIILAWMDE---QGVETLIFPTEILIAPGYRYRMVDAMITNFHQPRSTLLLLVSAFIG--GDWKAVYHHALESG-YRFLSYGDGSLLIP 405          
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|763329792|ref|WP_044188200.1| (MULTISPECIES: S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas] >gi|700235316|gb|KGN84749.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas sp. COT-290 OH860] >gi|700251314|gb|KGO00275.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas sp. COT-290 OH3588])

HSP 1 Score: 305.449 bits (781), Expect = 1.465e-95
Identity = 196/452 (43.36%), Postives = 258/452 (57.08%), Query Frame = 0
Query:   49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEARE--------GKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHY-GAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
             D  Y LP+  IAK P   RD S LLV  +  +            D  F +LP  LPA SLLV N SRVI ARLL RKE +G + E+ C+ P  PS    +AL+A   R  W CM+G  N +   R     E  L L   VE RE        G++G+V FSW + A+      TFG++LE +G +P+PPY+NR S+ +DLQ YQTVYA   GSVAAPTAGLHFT  + +Q+  G + +    +TLHVGAGTF+PV  + +G+H MH E I +    +E L   +G   P++ VGTTSVRTLE+LY  GVRLL + PS  SA             +L++ QW AY Y   K P+       A  AL A+ D  +   +  +   T ++IAPGY F +  G++TNFHQP STLLLL+ AF+        +Y HAL  G YRFLS+GDS+L++P
Sbjct:    9 EDYTYELPDERIAKYPLAQRDQSKLLVYQSGQIR-----------DRRFADLPDLLPADSLLVRNNSRVIRARLLFRKE-SGAQIEIFCLDPYQPS-SYELALSA-RQRCSWHCMLG--NARRWHR-----EQLLTLALHVEDREVVHLQAERGEEGVVHFSWDNEAY------TFGELLELMGILPIPPYLNRESEQSDLQTYQTVYARPEGSVAAPTAGLHFTEEVFRQI--GERGVSVLDVTLHVGAGTFRPVKSRTIGDHEMHQELIVLERQTIERLYRHSG---PIIAVGTTSVRTLESLYHLGVRLLHS-PSLPSA-------------DLAVEQWQAYEYVHEKAPS-------AEQALRAILDYMECNDLGTLVFPTAILIAPGYTFRVVSGIVTNFHQPNSTLLLLISAFIA--DDWRSVYDHALRHG-YRFLSYGDSSLLLP 404          
The following BLAST results are available for this feature:
BLAST of EWM29587.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112158|gb|EWM29587.1|0.000e+0100.00s-adenosylmethionine:trna ribosyltransferase-isome... [more]
gi|545708281|ref|XP_005706453.1|1.000e-10342.76S-adenosylmethionine:tRNA ribosyltransferase-isome... [more]
gi|662567828|gb|KER08990.1|3.681e-10243.33hypothetical protein HY22_14415 [Chlorobium sp. GB... [more]
gi|1082376754|gb|OFX35006.1|6.640e-10140.22S-adenosylmethionine tRNA ribosyltransferase [Bact... [more]
gi|1098074098|emb|SFH24426.1|2.664e-9941.08S-adenosylmethionine:tRNA ribosyltransferase-isome... [more]
gi|1121635101|ref|WP_073853351.1|1.509e-9841.57S-adenosylmethionine tRNA ribosyltransferase [Pont... [more]
gi|1057342948|ref|WP_068703520.1|3.762e-9842.32S-adenosylmethionine tRNA ribosyltransferase [Palu... [more]
gi|1000906097|ref|WP_061156698.1|5.496e-9642.57S-adenosylmethionine tRNA ribosyltransferase [Porp... [more]
gi|564602847|ref|WP_023847696.1|8.272e-9643.24S-adenosylmethionine tRNA ribosyltransferase [Porp... [more]
gi|763329792|ref|WP_044188200.1|1.465e-9543.36MULTISPECIES: S-adenosylmethionine tRNA ribosyltra... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1114rna1114Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications