EWM29587.1, cds1113 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|585112158|gb|EWM29587.1| (s-adenosylmethionine:trna ribosyltransferase-isomerase [Nannochloropsis gaditana]) HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0 Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0
Query: 1 MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD 533
MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD
Sbjct: 1 MLSSWELKLKPSLFMTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD 533
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|545708281|ref|XP_005706453.1| (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria] >gi|452822918|gb|EME29933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria]) HSP 1 Score: 329.331 bits (843), Expect = 1.000e-103 Identity = 195/456 (42.76%), Postives = 257/456 (56.36%), Query Frame = 0
Query: 43 FELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASS-----LVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPA 493
F++ P+ D DY LPE IA P PRDAS LLV+ S T + D FR L FLP ++L+ N S+VI ARL MRK TGG EVLC+ P++ + ++ N W C + G+N+K G++L L L +++ + ++ L+RF+W G+E F D+LE G IPLPPYM R D YQTVYAT GSVAAPTAGLHFT LL +L + + +TLHVGAGTF P+ + V +H MH ER V + AL+ L E RP V VGTTSVRTLETLYW G +L+++ S Q P+ +LSL QW Y + +S L + L+AL + D + G T+L+I P Y F + D +ITNFHQPRSTLL+LV AFLG + +YRHAL + YRFLS+GD +L+ P
Sbjct: 49 FDITPS-DYDYQLPEDRIALSPTTPRDASKLLVAVCGS--------GTVIADSTFRNLDKFLPDNAVLISNDSKVIAARLFMRKVETGGLVEVLCLDPITKTTLESLEAV---NSCEWLCFVRGKNVKPGTQLFLDDMES-PLKAEIQEKYEREALIRFTWNS---GREYK--FRDILEKHGIIPLPPYMKRNVTKDDRTSYQTVYATNEGSVAAPTAGLHFTPQLLSKLEQ--KNVSLVRVTLHVGAGTFSPIVTESVSKHDMHDERFHVTLTALKQLKENCQQSRPFVAVGTTSVRTLETLYWIGYQLITS-EDFRSRQCPT--------EDLSLSQWFPYERESSLMQTNTSACNSHLPTRMEILDALISWLEERACDSIMGRTKLIIVPNYPFFMVDAMITNFHQPRSTLLMLVAAFLGDRSALFHVYRHAL-EHDYRFLSYGDGSLLASPV 474
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|662567828|gb|KER08990.1| (hypothetical protein HY22_14415 [Chlorobium sp. GBChlB]) HSP 1 Score: 323.168 bits (827), Expect = 3.681e-102 Identity = 195/450 (43.33%), Postives = 266/450 (59.11%), Query Frame = 0
Query: 49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAG---SRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPT--FGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLI----EATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLM 489
+D DY LP CIAK P RD S LLV+DA + + F ELP LP+K+LL+ N ++VI+ARL ++K+ +GGK E+LCI S D A L ++ +VW+C+IGGR ++ G S+ L + L+ ++ + + VRF W SP F VLE +G++PLPPY+ R +D +D YQTVYA GSVAAPTAGLHFT ++ +LR + I+ LTLHVG GTF+P+ +V +HAMH ERI VP D L L+ G M+ VGTTSVRTLETLYW+GVRL A++ + + + L QWD+Y + +L A +L+ L + A+ G+ + GETQL IAPGY++ALCDG+ITNFHQP STL+LLV FLG ++Y AL G YRFLS+GD++L+
Sbjct: 13 SDYDYDLPAECIAKFPLAERDQSKLLVADA---------LTGRLEHRRFFELPDLLPSKALLICNNTKVISARLHLQKQ-SGGKVEILCIESAEASPDNAFGLME-TDGAVWKCLIGGR-VREGMELSKAGLFNGKPIFLSAKILPKTNGETQVRFQW--------SPQCLPFVAVLETLGQVPLPPYLKRDADESDKVRYQTVYAKQGGSVAAPTAGLHFTDAVFDRLRE--KSIDIAELTLHVGLGTFKPIESADVADHAMHGERIAVPKDTLNKLLAQLERRKDGGGKMIAVGTTSVRTLETLYWFGVRL---------AKKDGDARNSNHIM---LSQWDSYRL-----SDGGTLPDASESLKTLVEWAEQRGLSTISGETQLFIAPGYQYALCDGIITNFHQPHSTLILLVATFLGK-SLWKKVYDEALQNG-YRFLSYGDASLL 421
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1082376754|gb|OFX35006.1| (S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWA2_42_15] >gi|1082455725|gb|OFY01159.1| S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWE2_42_39] >gi|1082497628|gb|OFY42002.1| S-adenosylmethionine tRNA ribosyltransferase [Bacteroidetes bacterium GWF2_42_66]) HSP 1 Score: 319.316 bits (817), Expect = 6.640e-101 Identity = 179/445 (40.22%), Postives = 252/445 (56.63%), Query Frame = 0
Query: 50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGG-RNIKAGS---RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMI 490
D +YPLP+ IAK P RD S LLV S+ D IF ELP LP SLL+ N ++VI ARLL KE TG + E+ C+ P PS D IA + W+CMIG + K G+ +++ EN + L + + + +D ++RF W + F ++E G +P+PPY+NR ++ +DLQ YQTVY+ +GSVAAPTAGLHFT + Q++R Q E LTLHVGAGTFQPV + + H MH E+I +P +E L++ G P + VGTT++RTLE++YW G ++ + S ++NL + QW+ P Q + + +L+A+ K DH T+++I PGY F + DG++TNFHQP+STLLLLV AFLG +Y HAL + +YRFLS+GDSNL +
Sbjct: 16 DFNYPLPDEKIAKYPLPQRDQSKLLVWKNHSIE-----------DRIFSELPDLLPTNSLLIFNNTKVIRARLLFEKE-TGARIEIFCLDPHEPS-DYQIAFQQ-TKTCTWKCMIGNLKKWKEGTLKKSIIIEGEN-VELCAEKISSDRQDNIIRFIWNNVHF------EFSKIIEHAGILPIPPYLNRETEESDLQRYQTVYSKIKGSVAAPTAGLHFTEEVFQRIREKGYQTEE--LTLHVGAGTFQPVKSETIEAHRMHAEQIYIPQQLIERLLKHRG---PRIAVGTTTIRTLESIYWLGTQITTG--------------SVSDISNLKISQWE--------PYQGTKKIEVNESLQAILSFMKSRQTDHFSASTEIIIVPGYEFTIIDGMLTNFHQPQSTLLLLVSAFLGENWKT--VYNHAL-QNNYRFLSYGDSNLYL 409
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1098074098|emb|SFH24426.1| (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter chinhatensis]) HSP 1 Score: 315.079 bits (806), Expect = 2.664e-99 Identity = 182/443 (41.08%), Postives = 256/443 (57.79%), Query Frame = 0
Query: 49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
D Y LPE IAK P RD S LL+ D F ELP+ LP +LLV N ++V+ ARLLM+KE TGG E+ C+ PV+P + +A+ + W+C++G G + L E G+ L + EA++ L+ F+W +++ TF +VLE G++PLPPY+NR D YQT+YA+ +G+VAAPTAGLHFT ++ L+ Q I+T YLTLHVGAGTF+PV + + H MH E++ + LE L++ G+ P++PVGTTS+R+LE++YW G ++L+ E + L + QW AY PT A ALEAL +G DH+ TQ++IAPGY F +C GL+TNFHQP STLLLLV A +G ++Y+HAL+ YRFLS+GDS+L++P
Sbjct: 10 KDFVYDLPEERIAKFPLPVRDQSKLLLYRQGQF-----------IDHTFTELPTLLPPDTLLVFNDTKVVQARLLMQKE-TGGLVEIFCLEPVAPHREVQLAMQQ-TGSCTWKCLVGNNKRWKGGLVHLYFEGGV-LQAEREAQQEGHFLIHFTW------RQAELTFAEVLERCGRLPLPPYLNRDLTPEDHTRYQTIYASQQGAVAAPTAGLHFTDRVMDALK--AQGIDTAYLTLHVGAGTFKPVKSETMEAHEMHAEQVYISRSILERLLKQQGN--PVIPVGTTSMRSLESIYWLGAKVLAQ--------------PELTQQELHVSQWQAYE-SINQPT-------AAQALEALLHYLDRQGTDHLHANTQIIIAPGYTFRMCHGLVTNFHQPESTLLLLVSALIG--EDWRKVYQHALAH-DYRFLSYGDSSLLLP 403
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1121635101|ref|WP_073853351.1| (S-adenosylmethionine tRNA ribosyltransferase [Pontibacter sp. S10-8] >gi|1118108773|gb|OKL39444.1| S-adenosylmethionine tRNA ribosyltransferase [Pontibacter sp. S10-8]) HSP 1 Score: 313.153 bits (801), Expect = 1.509e-98 Identity = 185/445 (41.57%), Postives = 256/445 (57.53%), Query Frame = 0
Query: 49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVP--AVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
D Y LPE IAK P RD S LL+ ++ D F +LP+ LP +LLV N +RV+ ARLL++KE TGG E+ C+ PV+P + +A+ + S W+C++G + L E G+ L + EA++ L+RF+W + + TF +VLE G++PLPPY+NR D YQT+YA +G+VAAPTAGLHFT +L L Q I T YLTLHVGAGTF+PV + H MH E++ + LE L++ G+P++PVGTTS+R+LE+++W G ++L Q+P E L + QW AY S+ P A AL+AL D + VDH+ TQ++IAPGY F +C GL+TNFHQP STLLLLV A +G +YRHAL+ YRFLS+GDS+L++P
Sbjct: 10 KDFVYELPEERIAKFPLPERDQSRLLLYQKGQIT-----------DHTFTDLPALLPPHTLLVFNDTRVVQARLLLQKE-TGGLVEIFCLEPVAPHREVQLAMQQ-TGHSTWKCLVGNNKRWKSGPVRLYFEGGM-LQAEREAQQEGHFLIRFTW------EPAELTFAEVLERCGRLPLPPYLNRDLTPDDHTRYQTIYANQKGAVAAPTAGLHFTDRVLAAL--ASQSIATAYLTLHVGAGTFKPVKSDTMETHEMHAEQLYISKRILERLLQQ--QGKPVIPVGTTSMRSLESIFWLGAKVL---------QQP-----ELPPQELHVSQWQAY----------ESINPPSATEALQALLDYMDRQRVDHLHASTQIIIAPGYTFRMCQGLVTNFHQPESTLLLLVSALIG--ENWRNVYRHALAH-DYRFLSYGDSSLLLP 403
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1057342948|ref|WP_068703520.1| (S-adenosylmethionine tRNA ribosyltransferase [Paludibacter jiangxiensis] >gi|1015804768|dbj|GAT62844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Paludibacter jiangxiensis]) HSP 1 Score: 311.997 bits (798), Expect = 3.762e-98 Identity = 190/449 (42.32%), Postives = 258/449 (57.46%), Query Frame = 0
Query: 49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIK-----AGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPP-TFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
++ +Y LP+ IAK P RDAS LL+ + ++S + FR L +LP K+LLV N +RV+ AR+L KE TG + EV C+ P SPS D A+A + W CMIG N+K A +R + LT + G V+FSW +SP TF D+LEDVG++P+PPY+NR ++ +D + YQTVYA GSVAAPTAGLHFT ++L+ L I + +TLHVGAGTFQPV K +G+H MH E I V D LE L+ GS +V VGTTSVRTLE+LY+ G +L +LS D+ + QW+ Y+ A +P+ AL AL D + + TQ++IAPGY+F L G+ITNFHQP+STLLLL+ AF+G +IY +A +RFLS+GDS+L++P
Sbjct: 11 DEYNYLLPDERIAKFPLAERDASKLLIYNKGNISESR-----------FRNLVDYLPEKTLLVRNNTRVVQARVLFFKE-TGARIEVFCLEPHSPS-DYAVAFQQ-REQCEWTCMIG--NLKKWKEGALTRRFEVDGTSVTLTAERIDSSGLSHTVKFSW-------DSPSLTFADILEDVGELPIPPYLNRETEESDKETYQTVYAKIEGSVAAPTAGLHFTDAVLEDLEK--HAIRSTEVTLHVGAGTFQPVKSKSIGDHTMHSEMISVTKDTLEELLRNLGS---IVAVGTTSVRTLESLYFLGRQL---------------ILSPDTF-QFQVKQWEPYNSTALYPSTE-------EALSALIDYMNAHKLQKLNAATQIIIAPGYKFRLISGMITNFHQPKSTLLLLISAFVG--ADWKKIYNYAFD-NEFRFLSYGDSSLLLP 405
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|1000906097|ref|WP_061156698.1| (S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis] >gi|987481521|gb|KXC08635.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis]) HSP 1 Score: 306.605 bits (784), Expect = 5.496e-96 Identity = 189/444 (42.57%), Postives = 253/444 (56.98%), Query Frame = 0
Query: 50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGG-RNIKAGS-RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
D DYPLPE IAK RDA LLV D + D +F +L LP+ S+LV N +RVI ARLL RK TG EV C+ PVSP+ ++LTA + VW CM+G + ++G ++ + + G + DG +RFSW + + TFG++LE G +P+PPY+NR ++ DL+ YQTVYA +GSVAAPTAGLHFT ++LR Q +TLHVGAGTF+PV + +GEH MH E I + +LE L + GS +V VGTTSVRTLE+LYW G L +A S S +L + QW+AY + A+ + D +GV+ + T+++IAPGYR+ + D +ITNFHQPRSTLLLLV AF+G G +Y HAL G YRFLS+GD +L+IP
Sbjct: 11 DYDYPLPEERIAKHALPQRDACKLLVYDKGEIK-----------DAVFSQLSEVLPSGSMLVRNNTRVIRARLLFRK-STGATIEVFCLEPVSPA-QYELSLTARGS-CVWHCMVGNAKRWRSGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHY------TFGEILEMAGILPIPPYLNRDTEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLR--AQGTPVVDVTLHVGAGTFRPVKSETIGEHRMHRELIVIERSSLEALRDWQGS---VVAVGTTSVRTLESLYWLGRSLSTA--------------SHTSQESLKVNQWEAYE-------NEDVALSRSEAIRIILDWMDEQGVETLIFPTEILIAPGYRYRMVDAMITNFHQPRSTLLLLVSAFIG--GDWKAVYHHALESG-YRFLSYGDGSLLIP 405
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|564602847|ref|WP_023847696.1| (S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis] >gi|563394634|gb|ETA25809.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis SJD2] >gi|1209744912|gb|OWR81209.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas gingivalis SJD5]) HSP 1 Score: 306.22 bits (783), Expect = 8.272e-96 Identity = 192/444 (43.24%), Postives = 255/444 (57.43%), Query Frame = 0
Query: 50 DLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIG-GRNIKAGS-RLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
D DYPLPE IAK RDA LLV D + D +F +L LP+ S+LV N +RVI ARLL RK TG EV C+ PVSP+ ++LTA + VW CM+G + ++G ++ + + G + DG +RFSW + + TFG++LE G +P+PPY+NR ++ DL+ YQTVYA +GSVAAPTAGLHFT ++LR Q +TLHVGAGTF+PV + +GEH MH E I + +LE L + GS +V VGTTSVRTLE+LYW G L +A S S +L + QW+AY A S A+ + A D +GV+ + T+++IAPGYR+ + D +ITNFHQPRSTLLLLV AF+G G +Y HAL G YRFLS+GD +L+IP
Sbjct: 11 DYDYPLPEERIAKHALPQRDACKLLVYDKGQIK-----------DAVFSQLSEVLPSGSMLVRNNTRVIRARLLFRK-STGATIEVFCLEPVSPA-QYELSLTARGS-CVWHCMVGNAKRWRSGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHY------TFGEILEMAGILPIPPYLNRDTEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLR--AQGTPVVDVTLHVGAGTFRPVKSETIGEHRMHRELIVIERSSLEALRDWQGS---VVAVGTTSVRTLESLYWLGRSLSTA--------------SHTSQESLKVNQWEAYEN----EDAALSRSEAIRIILAWMDE---QGVETLIFPTEILIAPGYRYRMVDAMITNFHQPRSTLLLLVSAFIG--GDWKAVYHHALESG-YRFLSYGDGSLLIP 405
BLAST of EWM29587.1 vs. NCBI_GenBank
Match: gi|763329792|ref|WP_044188200.1| (MULTISPECIES: S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas] >gi|700235316|gb|KGN84749.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas sp. COT-290 OH860] >gi|700251314|gb|KGO00275.1| S-adenosylmethionine tRNA ribosyltransferase [Porphyromonas sp. COT-290 OH3588]) HSP 1 Score: 305.449 bits (781), Expect = 1.465e-95 Identity = 196/452 (43.36%), Postives = 258/452 (57.08%), Query Frame = 0
Query: 49 NDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEARE--------GKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHY-GAKWPTQASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIP 491
D Y LP+ IAK P RD S LLV + + D F +LP LPA SLLV N SRVI ARLL RKE +G + E+ C+ P PS +AL+A R W CM+G N + R E L L VE RE G++G+V FSW + A+ TFG++LE +G +P+PPY+NR S+ +DLQ YQTVYA GSVAAPTAGLHFT + +Q+ G + + +TLHVGAGTF+PV + +G+H MH E I + +E L +G P++ VGTTSVRTLE+LY GVRLL + PS SA +L++ QW AY Y K P+ A AL A+ D + + + T ++IAPGY F + G++TNFHQP STLLLL+ AF+ +Y HAL G YRFLS+GDS+L++P
Sbjct: 9 EDYTYELPDERIAKYPLAQRDQSKLLVYQSGQIR-----------DRRFADLPDLLPADSLLVRNNSRVIRARLLFRKE-SGAQIEIFCLDPYQPS-SYELALSA-RQRCSWHCMLG--NARRWHR-----EQLLTLALHVEDREVVHLQAERGEEGVVHFSWDNEAY------TFGELLELMGILPIPPYLNRESEQSDLQTYQTVYARPEGSVAAPTAGLHFTEEVFRQI--GERGVSVLDVTLHVGAGTFRPVKSRTIGDHEMHQELIVLERQTIERLYRHSG---PIIAVGTTSVRTLESLYHLGVRLLHS-PSLPSA-------------DLAVEQWQAYEYVHEKAPS-------AEQALRAILDYMECNDLGTLVFPTAILIAPGYTFRVVSGIVTNFHQPNSTLLLLISAFIA--DDWRSVYDHALRHG-YRFLSYGDSSLLLP 404 The following BLAST results are available for this feature:
BLAST of EWM29587.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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