EWM29577.1, cds1094 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|585112148|gb|EWM29577.1| (trna nucleotidyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1256.51 bits (3250), Expect = 0.000e+0 Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0
Query: 1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK 616
MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK
Sbjct: 1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK 616
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|635367521|emb|CCI44239.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 345.51 bits (885), Expect = 3.073e-108 Identity = 217/589 (36.84%), Postives = 304/589 (51.61%), Query Frame = 0
Query: 4 SNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLV--LGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
+N E I + +VE LF L E A Q LRVAGGWVRDKLLG +S D+DIALD ++G+ FA+ +N+ G +T SIGVI+ANPEQSKHLET + +G W+DF NLR+ETY D RIP + FGT +EDA RRDFTINSL+YN+ + VED+T +GL DL G IRTPL TFLDDPLR+LRAIRF++RF LD N+ AA+ +E++ AL KVSRER+G E+ GML G A P A M+ +LGL +F +P++ +R++ + + + + +++ W E T+ M + GF++ + + R ++L LA+ L P+ +C+ + KK+ + + ++E+LK R +DAED+ + L C L QK+ G+ R+E G LLR + LW DVAC + +N TT V +Y V L+G W+L+PL+ G VI LG+ GP V ++D I WQL+ P E KH TL
Sbjct: 30 TNKEMIEKTSIKVNKVELKLFRFLREIAGQSACNVTLRVAGGWVRDKLLGLDSSDIDIALDTITGSDFAKFVNEYENQHGGKTHSIGVIKANPEQSKHLETITMKFEEIG-WVDFVNLRSETYSEDHRIPNVQFGTPLEDAERRDFTINSLYYNISNDRVEDFTERGLDDL--KNGIIRTPLDPRVTFLDDPLRVLRAIRFAARFGFELDKNLCDAAQLDEVKDALIQKVSRERIGKELLGMLEGPSAHPQSAFSMMHDLGLFKCIFLLPQQ--SRIMDEN-----------DTNVQSDIFIKK-----WDHAYEHSTK--MHHYLSTHYGFLE-SEIDKMEEKKRNRYKLSCLASFLFPFSSYCVMLSK----KKVRLPCYVIKESLKLRNRDAEDIDHII--LANCGDL-------------------QKLVHGNVFD-------------------RVEVGLLLRKIGPLWEVCRDVACISDMI-----QNSTTPQSF---------------VSAKYDALTTFVTNNNLEGAWSLKPLMTGNDVIRVLGVSPGPEVKKILDEIIIWQLEDPERTYESCVKHFTTL 530
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|673022618|ref|XP_008865270.1| (hypothetical protein H310_03255 [Aphanomyces invadans] >gi|574478498|gb|ETW05493.1| hypothetical protein H310_03255 [Aphanomyces invadans]) HSP 1 Score: 342.813 bits (878), Expect = 2.399e-107 Identity = 228/602 (37.87%), Postives = 312/602 (51.83%), Query Frame = 0
Query: 1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRAD--SRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLP---------VGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSM-QGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
M + PTA I LT+ E LF L + Q G LRVAGGWVRDKLLG+ SDD+DI LD ++GAAFA L+N D G +T ++G+I+ANP+QSKHLETA + + W+DF NLR ETY D RIP + FGT +EDA RRDFTINSLFYNL T+ VED+TG GL+DL G IRTPL TFLDDPLR+LRAIRF+SRF PL ++V A E ++ AL KVSRERVG E+ GML+G A P VA++ L L DVVF +PE P V W + A+V+ ++L + R K + D T + G + + +G R A +L LAA+L P ++ + + K + V VRE++K AK+A+ ++ + AL++C+ A P D R++ G L+R++ LW D+A E L+G D+S + + Y + Y + LD +W ++PLL+GK V+ L L GP V A+ DA I +QL+ P +++ HL L
Sbjct: 9 MATNFPTAA----IVLTDEEEKLFDFLLDVEKQNNCGLKLRVAGGWVRDKLLGRASDDIDIVLDKMTGAAFAALVNAYETDHGHKTHAVGIIKANPDQSKHLETATMQLGSGWVDFVNLRAETYADDEAHRIPSMEFGTPLEDAQRRDFTINSLFYNLATKEVEDFTGHGLSDLRH--GVIRTPLDPRITFLDDPLRVLRAIRFASRFQFPLAPDLVEALEQPNIREALVKKVSRERVGKELAGMLTGSHANPVVAIQCLHQFHLLDVVFQIPEGPFYSFQPAHTAASPTKVSIPSNWTDKAFASVQALHSLQLYR-KDKVSDDTPSVETSSTTADGIEVATEG-----RANRA--------KLEMLAAVLLPLAEYSVLHKK----KHVPVAHSIVRESIKFAAKEADHVSLV--ALNQCRRFVAIANA-----------------PFD----------------------RVQVGLLVREVGALWTVCADMAYLVEVV-LEG-------------VDVS-SAREKYAALSTY-----VTRDAALDNVWEMKPLLNGKEVMEALALTPGPAVKAMNDAVIAYQLKFPSATRDDVLTHLVAL 525
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|698802212|ref|XP_009834135.1| (hypothetical protein H257_09587 [Aphanomyces astaci] >gi|698802216|ref|XP_009834137.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574111093|gb|ETV76590.1| hypothetical protein H257_09587 [Aphanomyces astaci] >gi|574111094|gb|ETV76591.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 342.428 bits (877), Expect = 5.496e-107 Identity = 227/586 (38.74%), Postives = 309/586 (52.73%), Query Frame = 0
Query: 11 LPI-ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRAD--SRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLP---VGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
LP+ I LT E LF L + Q G LRVAGGWVRDKLLG+ SDD+DI LDN++G AFAEL+N G +T ++GVI+ANP+QSKHLETA + + W+DF NLR ETY D RIP + FGT +EDA RRDFTINSLFYNL T+SVED+TGQGL DL G IRTPL TFLDDPLR+LRAIRF+SRF PL +++AA E+ ++ AL KVSRERVG E+ GML+G A P VAL L L +VVF +P + P W +A V+ +AL + R+ + S A G + VT+ R +L +LAA+L P ++ + + K + V VRE++K AKDA+ ++ + L++C+ R V P D R++ G +LRD+ LW +D+A E T E Y + Y V +GLD +W ++PLL+GK ++ LG+ GP V A+ DA I +QL+ P +++ +H+++L
Sbjct: 27 LPVMIALTADEEKLFDFLLDVEKQNNCGLTLRVAGGWVRDKLLGRASDDIDIVLDNMTGVAFAELVNAYETQHGHKTHAVGVIKANPDQSKHLETATMQLGSGWVDFVNLRAETYADDEAHRIPSMEFGTPLEDAQRRDFTINSLFYNLATKSVEDFTGQGLPDL--QHGVIRTPLDPTITFLDDPLRVLRAIRFASRFRFPLADDLIAALEHRAIREALVKKVSRERVGKELGGMLTGSHANPMVALTSLHRFHLDEVVFQLPTGPFFTLHPPLEAAIPPHWTDTSMACVQALHALDLARQDQRAPSSPTTTSSSTSSTTADG--------IEVTNNEATSHRL-KLRWLAAVLLPLAEYSIVLKK----KHVPVAHAIVRESIKFAAKDADVVSLVL--LNQCR------------------RFVAANAPFD----------------------RVQVGLVLRDVGALWPLAVDMAYLVEVVLQHSDVEQTREK---------------YAALSAY------VVNVGLDRVWEMKPLLNGKDLMDALGVKPGPAVKAMNDAVILYQLEFPSAPRDDVLRHVRSL 534
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1173932745|gb|OQR84657.1| (tRNA nucleotidyltransferase [Achlya hypogyna]) HSP 1 Score: 339.347 bits (869), Expect = 2.449e-106 Identity = 227/584 (38.87%), Postives = 299/584 (51.20%), Query Frame = 0
Query: 12 PIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADS---RIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGM--EGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
P + LT E LF L + Q G LRVAGGWVRDKLLG+ SDD+DI LD ++GAAFAEL+N G T ++G+I+ANPEQSKHLETA + + WIDF NLR ETY AD+ RIP + FG+ ++DA RRDFTINSLFYNL T SVED+T QGL DL G +RTPL TFLDDPLR+LRA+RF++RF L+A++ AA E++ AL KVSRERVG E+ GML+G A P AL +L GL + VF +P T L + E W Q LA + LL R + G++ A + F + + +A + P LAP+ +T +K K + W +R+ LK RAKDAED+ + + V+R R E D R+ G LLRD+ LW DVA + L G TE+ +Y V +GLD +W L+P+LDGK +++ L LP GP V + +E+QL HP G +E HL++L
Sbjct: 16 PTLVLTPDEEKLFAFLLDVDKQKAAGLTLRVAGGWVRDKLLGRSSDDIDIVLDTMTGAAFAELVNTYEVQHGHATHTVGIIKANPEQSKHLETATMQLGSGWIDFVNLRAETY-ADNEAHRIPSMEFGSPLQDAERRDFTINSLFYNLNTRSVEDYTAQGLKDLAD--GIVRTPLEPRVTFLDDPLRILRAVRFAARFQFELEASLCAALRLPEVKDALLKKVSRERVGKELSGMLAGTSAHPDRALALLAEFGLLECVFALPTPCLTTALEPATLPPETWPQ-ALACALAMHRLLHARSPANV--------NTGALDDA--GLNRFK--IEILAATLLP------------LAPF----VTLQKK---KTVAAPYWIIRDGLKLRAKDAEDVANVVH--------------------------------------KTVDRFRGVELD------RVAVGLLLRDVGDLWGVCADVAFVYDTI-LAGAPVAATEA--------------------KYAALRAFVADVGLDRVWELKPILDGKELMTLLSLPPGPGVRVMSAKVVEYQLAHPAGTRDECLAHLRSL 499
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|218186506|gb|EEC68933.1| (hypothetical protein OsI_37630 [Oryza sativa Indica Group]) HSP 1 Score: 337.806 bits (865), Expect = 2.252e-105 Identity = 212/583 (36.36%), Postives = 314/583 (53.86%), Query Frame = 0
Query: 14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
+ LTE E +F L + G GT LRVAGGWVRDKLLGK+S D+DIALDN++G F E +N+ + G E + IGVIQ NP+QSKHLETAR+L+ WIDF NLR+E Y +SRIP + GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL G I TPLPA TFLDDPLR+LRAIRF++RF L ++ AA +E+++ L K+S+ER+G EV+ M+S D P A+ + +LGL VVF PE+ PV + + ++++ +A L I + GG++ Q EH RLCF +A+ P ++ + D+K KKI V + +R++LK +A DA+ + + A ++ L + + T +E + + P D+ R+ AG +LR++K WR L + C + G +P + L++ + +Y + + LD +W ++PLLDGKA++ + + GPL+G ++WQL +PRG EE + ++ ++R
Sbjct: 23 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDP---PVP--DKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTPV-RNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFI-CTLTYPEVSSGGDPLGQP------------DELHQRKEKYTRAERLITELELDAVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 533
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|113648782|dbj|BAF29294.1| (Os12g0171200 [Oryza sativa Japonica Group]) HSP 1 Score: 336.65 bits (862), Expect = 6.905e-105 Identity = 213/583 (36.54%), Postives = 315/583 (54.03%), Query Frame = 0
Query: 14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
+ LTE E +F L + G GT LRVAGGWVRDKLLGK+S D+DIALDN++G F E +N+ + G E + IGVIQ NP+QSKHLETAR+L+ WIDF NLR+E Y +SRIP + GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL G I TPLPA TFLDDPLR+LRAIRF++RF L ++ AA +E+++ L K+S+ER+G EV+ M+S D P A+ + +LGL VVF PE+ PV + + ++++ +A L I + GG++ Q EH RLCF +A+ P ++ + D+K KKI V + +R++LK +A DA+ + + A ++ L + + T +E + + P D+ R+ AG +LR++K WR L + GG+ + P + L++ + +Y + + LDG+W ++PLLDGKA++ + + GPL+G ++WQL +PRG EE + ++ ++R
Sbjct: 24 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDP---PVP--DKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTPV-RNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFICTLTYPEVSSGGD--SLGQPDE-----------LHQRKEKYTRAERLITELELDGVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 534
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1002873659|ref|XP_006664379.2| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2, partial [Oryza brachyantha]) HSP 1 Score: 336.65 bits (862), Expect = 1.447e-104 Identity = 212/581 (36.49%), Postives = 309/581 (53.18%), Query Frame = 0
Query: 16 LTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
LTE E +F L + G GT LRVAGGWVRDKLLGK+S D+DIALDN++G F E +N+ + G E ++IGVIQ NP+QSKHLETAR+L+ WIDF NLR+E Y +SRIP + GTA EDA RRD TINSLF+N+ T SVED TG+G+ DL G I TPLPA TFLDDPLR+LRAIRF++RF L+ ++ AA +E+++ L K+S+ER+G EV+ M+S D P A+ + +LGL VVF PE+ +V + Q ++++ +A L I + GG++ Q EH RLC +A+ P + + D+K KKI V + +R++LK +A DA+ + + A ++ L + + A +E + + P D R+ AG +LR++K WR L ++ T A D L+ +Y+ ++ + LDG+W ++PLLDGKA++ + GPL+G ++WQL +P G EE + ++ ++R
Sbjct: 47 LTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSSDIDIALDNMTGQNFCEKVNEYSELLGEEQKTIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTCSVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLNEDLKEAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCCIRDLGLFYVVFAFPEKTDPQV-----PDKCDQLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCLYSALFTPL-RSTVYFDKK--SKKIPVANYIIRDSLKLKASDADTVVNIHAASEKFAELINLLESNENLANVKEKLDDEYLEIPTDL-------------------VKRVSAGLILREIKDFWRAALFIST-------------LTYPEFGSASDCLSHQDELHRRNEKYKTAESSITELELDGVWKMKPLLDGKAIMGIMQAKAGPLIGKWQQRLLKWQLAYPEGTMEECIEWMKQSQSKR 555
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|672116697|ref|XP_008781519.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Phoenix dactylifera]) HSP 1 Score: 335.88 bits (860), Expect = 5.271e-104 Identity = 222/588 (37.76%), Postives = 308/588 (52.38%), Query Frame = 0
Query: 14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEE-----QDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPK-GPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERV 595
I L E E +F L + T LRVAGGWVRDKLLGK+ D+DIALDN+ G F E +N+ L G E + IGVIQ NP+QSKHLETAR+ + WIDF NLR+ETY +SRIP + FGTA EDA RRD TINSLFYN+ T+SVED+TG+G+ DL G I TPLP TFLDDPLR+LRAIRF +RF LD ++ AA +EE++ A+ K+SRER+G EV+ M SG +P A+ + +L L VVF PE + V+ EG + + +++ T + + RL A+ P ++ + EDRK KKI V + +R +LK + DAE + +L GAL+R S+ + + GD ++ VE + +E D+R R+ AG LLR +K WR L ++ G T + ++R+ +I V++ A+ GLD +W ++PLLDGKA++S L L GPL+ + I+WQL HP G +E ++ A+RV
Sbjct: 66 IDLKEKEEKIFRRLLDVVRDFKLETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGREFCEKVNEYLHSIGEEQQGIGVIQCNPDQSKHLETARMRIYDIWIDFVNLRSETYVENSRIPTMKFGTAKEDAYRRDLTINSLFYNINTDSVEDFTGRGVRDL--KTGYIVTPLPPKDTFLDDPLRVLRAIRFGARFGFVLDEDLKKAASDEEVRAAIADKISRERIGHEVDLMFSGN--QPIKAMTYICDLQLFYVVFTFPENPQPSVV----------------------------------------EGCDRHCVSYMDAAWNLLQSTGYSILSDEQRRLYLYGALFLP-VRNTIYEDRK--SKKIPVASYIIRNSLKLKNSDAETVMSLHGALERFFSIISLLES-----------------DGD---SKIVEVKLEDEFLDIPFDSR---IRVLAGLLLRKIKTFWRVALLLSALLYPKVDHAGGPLTNDFETERSREIFVSIDR-------------AISKSGLDNVWEMKPLLDGKAIMSVLQLKSGGPLIREWQERLIKWQLAHPEGTTDECLDWMKQSQAKRV 570
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1002309673|ref|XP_015618204.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Oryza sativa Japonica Group] >gi|77553768|gb|ABA96564.1| tRNA-nucleotidyltransferase, putative, expressed [Oryza sativa Japonica Group]) HSP 1 Score: 336.265 bits (861), Expect = 6.917e-104 Identity = 212/583 (36.36%), Postives = 314/583 (53.86%), Query Frame = 0
Query: 14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
+ LTE E +F L + G GT LRVAGGWVRDKLLGK+S D+DIALDN++G F E +N+ + G E + IGVIQ NP+QSKHLETAR+L+ WIDF NLR+E Y +SRIP + GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL G I TPLPA TFLDDPLR+LRAIRF++RF L ++ AA +E+++ L K+S+ER+G EV+ M+S D P A+ + +LGL VVF PE+ V + + ++++ +A L I + GG++ Q EH RLCF +A+ P ++ + D+K KKI V + +R++LK +A DA+ + + A ++ L + + T +E + + P D+ R+ AG +LR++K WR L + GG+ + P + L++ + +Y + + LDG+W ++PLLDGKA++ + + GPL+G ++WQL +PRG EE + ++ ++R
Sbjct: 87 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDPPV-----PDKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTP-VRNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFICTLTYPEVSSGGD--SLGQPDE-----------LHQRKEKYTRAERLITELELDGVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 597 The following BLAST results are available for this feature:
BLAST of EWM29577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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