EWM29577.1, cds1094 (CDS) Nannochloropsis gaditana

Overview
NameEWM29577.1
Unique Namecds1094
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1170689..1172539 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29577.1
Producttrna nucleotidyltransferase
Orig transcript idgnl|cribi|Naga_100006g72.8666.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1170689..1172539 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003723RNA binding
GO:0016779nucleotidyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR002646PolA_pol_head_dom
Homology
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|585112148|gb|EWM29577.1| (trna nucleotidyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 1256.51 bits (3250), Expect = 0.000e+0
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0
Query:    1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK 616
            MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK
Sbjct:    1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERVIGTRDEDGVTHKARKEKKTGK 616          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|635367521|emb|CCI44239.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 345.51 bits (885), Expect = 3.073e-108
Identity = 217/589 (36.84%), Postives = 304/589 (51.61%), Query Frame = 0
Query:    4 SNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLV--LGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
            +N    E   I + +VE  LF  L E A Q      LRVAGGWVRDKLLG +S D+DIALD ++G+ FA+ +N+     G +T SIGVI+ANPEQSKHLET  +    +G W+DF NLR+ETY  D RIP + FGT +EDA RRDFTINSL+YN+  + VED+T +GL DL    G IRTPL    TFLDDPLR+LRAIRF++RF   LD N+  AA+ +E++ AL  KVSRER+G E+ GML G  A P  A  M+ +LGL   +F +P++  +R++              +  + + + +++     W    E  T+  M     +  GF++   +     + R  ++L  LA+ L P+  +C+   +    KK+ +  + ++E+LK R +DAED+  +   L  C  L                   QK+  G+                      R+E G LLR +  LW    DVAC  +       +N TT                   V  +Y      V    L+G W+L+PL+ G  VI  LG+  GP V  ++D  I WQL+ P    E   KH  TL
Sbjct:   30 TNKEMIEKTSIKVNKVELKLFRFLREIAGQSACNVTLRVAGGWVRDKLLGLDSSDIDIALDTITGSDFAKFVNEYENQHGGKTHSIGVIKANPEQSKHLETITMKFEEIG-WVDFVNLRSETYSEDHRIPNVQFGTPLEDAERRDFTINSLYYNISNDRVEDFTERGLDDL--KNGIIRTPLDPRVTFLDDPLRVLRAIRFAARFGFELDKNLCDAAQLDEVKDALIQKVSRERIGKELLGMLEGPSAHPQSAFSMMHDLGLFKCIFLLPQQ--SRIMDEN-----------DTNVQSDIFIKK-----WDHAYEHSTK--MHHYLSTHYGFLE-SEIDKMEEKKRNRYKLSCLASFLFPFSSYCVMLSK----KKVRLPCYVIKESLKLRNRDAEDIDHII--LANCGDL-------------------QKLVHGNVFD-------------------RVEVGLLLRKIGPLWEVCRDVACISDMI-----QNSTTPQSF---------------VSAKYDALTTFVTNNNLEGAWSLKPLMTGNDVIRVLGVSPGPEVKKILDEIIIWQLEDPERTYESCVKHFTTL 530          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|673022618|ref|XP_008865270.1| (hypothetical protein H310_03255 [Aphanomyces invadans] >gi|574478498|gb|ETW05493.1| hypothetical protein H310_03255 [Aphanomyces invadans])

HSP 1 Score: 342.813 bits (878), Expect = 2.399e-107
Identity = 228/602 (37.87%), Postives = 312/602 (51.83%), Query Frame = 0
Query:    1 MVGSNPTATELPIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRAD--SRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLP---------VGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSM-QGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
            M  + PTA     I LT+ E  LF  L +   Q   G  LRVAGGWVRDKLLG+ SDD+DI LD ++GAAFA L+N    D G +T ++G+I+ANP+QSKHLETA + +   W+DF NLR ETY  D   RIP + FGT +EDA RRDFTINSLFYNL T+ VED+TG GL+DL    G IRTPL    TFLDDPLR+LRAIRF+SRF  PL  ++V A E   ++ AL  KVSRERVG E+ GML+G  A P VA++ L    L DVVF +PE       P         V     W  +  A+V+  ++L + R K  +  D     T  +   G + + +G     R   A        +L  LAA+L P  ++ +   +    K + V    VRE++K  AK+A+ ++ +  AL++C+       A                 P D                      R++ G L+R++  LW    D+A   E   L+G              D+S + +  Y   + Y       +   LD +W ++PLL+GK V+  L L  GP V A+ DA I +QL+ P    +++  HL  L
Sbjct:    9 MATNFPTAA----IVLTDEEEKLFDFLLDVEKQNNCGLKLRVAGGWVRDKLLGRASDDIDIVLDKMTGAAFAALVNAYETDHGHKTHAVGIIKANPDQSKHLETATMQLGSGWVDFVNLRAETYADDEAHRIPSMEFGTPLEDAQRRDFTINSLFYNLATKEVEDFTGHGLSDLRH--GVIRTPLDPRITFLDDPLRVLRAIRFASRFQFPLAPDLVEALEQPNIREALVKKVSRERVGKELAGMLTGSHANPVVAIQCLHQFHLLDVVFQIPEGPFYSFQPAHTAASPTKVSIPSNWTDKAFASVQALHSLQLYR-KDKVSDDTPSVETSSTTADGIEVATEG-----RANRA--------KLEMLAAVLLPLAEYSVLHKK----KHVPVAHSIVRESIKFAAKEADHVSLV--ALNQCRRFVAIANA-----------------PFD----------------------RVQVGLLVREVGALWTVCADMAYLVEVV-LEG-------------VDVS-SAREKYAALSTY-----VTRDAALDNVWEMKPLLNGKEVMEALALTPGPAVKAMNDAVIAYQLKFPSATRDDVLTHLVAL 525          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|698802212|ref|XP_009834135.1| (hypothetical protein H257_09587 [Aphanomyces astaci] >gi|698802216|ref|XP_009834137.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574111093|gb|ETV76590.1| hypothetical protein H257_09587 [Aphanomyces astaci] >gi|574111094|gb|ETV76591.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 342.428 bits (877), Expect = 5.496e-107
Identity = 227/586 (38.74%), Postives = 309/586 (52.73%), Query Frame = 0
Query:   11 LPI-ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRAD--SRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLP---VGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
            LP+ I LT  E  LF  L +   Q   G  LRVAGGWVRDKLLG+ SDD+DI LDN++G AFAEL+N      G +T ++GVI+ANP+QSKHLETA + +   W+DF NLR ETY  D   RIP + FGT +EDA RRDFTINSLFYNL T+SVED+TGQGL DL    G IRTPL    TFLDDPLR+LRAIRF+SRF  PL  +++AA E+  ++ AL  KVSRERVG E+ GML+G  A P VAL  L    L +VVF +P      + P         W    +A V+  +AL + R+            +  S   A G        + VT+      R  +L +LAA+L P  ++ +   +    K + V    VRE++K  AKDA+ ++ +   L++C+                  R V    P D                      R++ G +LRD+  LW   +D+A   E          T E                Y   + Y      V  +GLD +W ++PLL+GK ++  LG+  GP V A+ DA I +QL+ P    +++ +H+++L
Sbjct:   27 LPVMIALTADEEKLFDFLLDVEKQNNCGLTLRVAGGWVRDKLLGRASDDIDIVLDNMTGVAFAELVNAYETQHGHKTHAVGVIKANPDQSKHLETATMQLGSGWVDFVNLRAETYADDEAHRIPSMEFGTPLEDAQRRDFTINSLFYNLATKSVEDFTGQGLPDL--QHGVIRTPLDPTITFLDDPLRVLRAIRFASRFRFPLADDLIAALEHRAIREALVKKVSRERVGKELGGMLTGSHANPMVALTSLHRFHLDEVVFQLPTGPFFTLHPPLEAAIPPHWTDTSMACVQALHALDLARQDQRAPSSPTTTSSSTSSTTADG--------IEVTNNEATSHRL-KLRWLAAVLLPLAEYSIVLKK----KHVPVAHAIVRESIKFAAKDADVVSLVL--LNQCR------------------RFVAANAPFD----------------------RVQVGLVLRDVGALWPLAVDMAYLVEVVLQHSDVEQTREK---------------YAALSAY------VVNVGLDRVWEMKPLLNGKDLMDALGVKPGPAVKAMNDAVILYQLEFPSAPRDDVLRHVRSL 534          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1173932745|gb|OQR84657.1| (tRNA nucleotidyltransferase [Achlya hypogyna])

HSP 1 Score: 339.347 bits (869), Expect = 2.449e-106
Identity = 227/584 (38.87%), Postives = 299/584 (51.20%), Query Frame = 0
Query:   12 PIITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADS---RIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGM--EGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTL 590
            P + LT  E  LF  L +   Q   G  LRVAGGWVRDKLLG+ SDD+DI LD ++GAAFAEL+N      G  T ++G+I+ANPEQSKHLETA + +   WIDF NLR ETY AD+   RIP + FG+ ++DA RRDFTINSLFYNL T SVED+T QGL DL    G +RTPL    TFLDDPLR+LRA+RF++RF   L+A++ AA    E++ AL  KVSRERVG E+ GML+G  A P  AL +L   GL + VF +P    T  L    +  E W Q  LA     + LL  R    +          G++  A   +  F   + + +A + P            LAP+    +T  +K   K +    W +R+ LK RAKDAED+  +                                        + V+R R  E D      R+  G LLRD+  LW    DVA   +   L G     TE+                    +Y      V  +GLD +W L+P+LDGK +++ L LP GP V  +    +E+QL HP G  +E   HL++L
Sbjct:   16 PTLVLTPDEEKLFAFLLDVDKQKAAGLTLRVAGGWVRDKLLGRSSDDIDIVLDTMTGAAFAELVNTYEVQHGHATHTVGIIKANPEQSKHLETATMQLGSGWIDFVNLRAETY-ADNEAHRIPSMEFGSPLQDAERRDFTINSLFYNLNTRSVEDYTAQGLKDLAD--GIVRTPLEPRVTFLDDPLRILRAVRFAARFQFELEASLCAALRLPEVKDALLKKVSRERVGKELSGMLAGTSAHPDRALALLAEFGLLECVFALPTPCLTTALEPATLPPETWPQ-ALACALAMHRLLHARSPANV--------NTGALDDA--GLNRFK--IEILAATLLP------------LAPF----VTLQKK---KTVAAPYWIIRDGLKLRAKDAEDVANVVH--------------------------------------KTVDRFRGVELD------RVAVGLLLRDVGDLWGVCADVAFVYDTI-LAGAPVAATEA--------------------KYAALRAFVADVGLDRVWELKPILDGKELMTLLSLPPGPGVRVMSAKVVEYQLAHPAGTRDECLAHLRSL 499          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|218186506|gb|EEC68933.1| (hypothetical protein OsI_37630 [Oryza sativa Indica Group])

HSP 1 Score: 337.806 bits (865), Expect = 2.252e-105
Identity = 212/583 (36.36%), Postives = 314/583 (53.86%), Query Frame = 0
Query:   14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
            + LTE E  +F  L +     G GT LRVAGGWVRDKLLGK+S D+DIALDN++G  F E +N+  +  G E + IGVIQ NP+QSKHLETAR+L+   WIDF NLR+E Y  +SRIP +  GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL    G I TPLPA  TFLDDPLR+LRAIRF++RF   L  ++  AA +E+++  L  K+S+ER+G EV+ M+S  D  P  A+  + +LGL  VVF  PE+      PV   +   +  ++++ +A  L        I   +  GG++   Q                        EH RLCF +A+  P  ++ +  D+K   KKI V  + +R++LK +A DA+ +  +  A ++   L   + +     T +E    + +  P D+                     R+ AG +LR++K  WR  L + C      +  G +P  +               L++ + +Y      +  + LD +W ++PLLDGKA++  + +  GPL+G      ++WQL +PRG  EE  + ++   ++R
Sbjct:   23 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDP---PVP--DKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTPV-RNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFI-CTLTYPEVSSGGDPLGQP------------DELHQRKEKYTRAERLITELELDAVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 533          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|113648782|dbj|BAF29294.1| (Os12g0171200 [Oryza sativa Japonica Group])

HSP 1 Score: 336.65 bits (862), Expect = 6.905e-105
Identity = 213/583 (36.54%), Postives = 315/583 (54.03%), Query Frame = 0
Query:   14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
            + LTE E  +F  L +     G GT LRVAGGWVRDKLLGK+S D+DIALDN++G  F E +N+  +  G E + IGVIQ NP+QSKHLETAR+L+   WIDF NLR+E Y  +SRIP +  GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL    G I TPLPA  TFLDDPLR+LRAIRF++RF   L  ++  AA +E+++  L  K+S+ER+G EV+ M+S  D  P  A+  + +LGL  VVF  PE+      PV   +   +  ++++ +A  L        I   +  GG++   Q                        EH RLCF +A+  P  ++ +  D+K   KKI V  + +R++LK +A DA+ +  +  A ++   L   + +     T +E    + +  P D+                     R+ AG +LR++K  WR  L +          GG+  +   P +           L++ + +Y      +  + LDG+W ++PLLDGKA++  + +  GPL+G      ++WQL +PRG  EE  + ++   ++R
Sbjct:   24 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDP---PVP--DKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTPV-RNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFICTLTYPEVSSGGD--SLGQPDE-----------LHQRKEKYTRAERLITELELDGVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 534          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1002873659|ref|XP_006664379.2| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2, partial [Oryza brachyantha])

HSP 1 Score: 336.65 bits (862), Expect = 1.447e-104
Identity = 212/581 (36.49%), Postives = 309/581 (53.18%), Query Frame = 0
Query:   16 LTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
            LTE E  +F  L +     G GT LRVAGGWVRDKLLGK+S D+DIALDN++G  F E +N+  +  G E ++IGVIQ NP+QSKHLETAR+L+   WIDF NLR+E Y  +SRIP +  GTA EDA RRD TINSLF+N+ T SVED TG+G+ DL    G I TPLPA  TFLDDPLR+LRAIRF++RF   L+ ++  AA +E+++  L  K+S+ER+G EV+ M+S  D  P  A+  + +LGL  VVF  PE+   +V      +   Q  ++++ +A  L        I   +  GG++   Q                        EH RLC  +A+  P  +  +  D+K   KKI V  + +R++LK +A DA+ +  +  A ++   L   + +    A  +E    + +  P D                      R+ AG +LR++K  WR  L ++               T      A D       L+    +Y+    ++  + LDG+W ++PLLDGKA++  +    GPL+G      ++WQL +P G  EE  + ++   ++R
Sbjct:   47 LTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSSDIDIALDNMTGQNFCEKVNEYSELLGEEQKTIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTCSVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLNEDLKEAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCCIRDLGLFYVVFAFPEKTDPQV-----PDKCDQLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCLYSALFTPL-RSTVYFDKK--SKKIPVANYIIRDSLKLKASDADTVVNIHAASEKFAELINLLESNENLANVKEKLDDEYLEIPTDL-------------------VKRVSAGLILREIKDFWRAALFIST-------------LTYPEFGSASDCLSHQDELHRRNEKYKTAESSITELELDGVWKMKPLLDGKAIMGIMQAKAGPLIGKWQQRLLKWQLAYPEGTMEECIEWMKQSQSKR 555          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|672116697|ref|XP_008781519.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Phoenix dactylifera])

HSP 1 Score: 335.88 bits (860), Expect = 5.271e-104
Identity = 222/588 (37.76%), Postives = 308/588 (52.38%), Query Frame = 0
Query:   14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREHRLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMRPGDACGTRDVERRRSEE-----QDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPK-GPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAERV 595
            I L E E  +F  L +        T LRVAGGWVRDKLLGK+  D+DIALDN+ G  F E +N+ L   G E + IGVIQ NP+QSKHLETAR+ +   WIDF NLR+ETY  +SRIP + FGTA EDA RRD TINSLFYN+ T+SVED+TG+G+ DL    G I TPLP   TFLDDPLR+LRAIRF +RF   LD ++  AA +EE++ A+  K+SRER+G EV+ M SG   +P  A+  + +L L  VVF  PE  +  V+                                        EG  +     +     +++ T   +    + RL    A+  P  ++ + EDRK   KKI V  + +R +LK +  DAE + +L GAL+R  S+   + +                  GD   ++ VE +  +E      D+R    R+ AG LLR +K  WR  L ++          G   T +  ++R+ +I V++               A+   GLD +W ++PLLDGKA++S L L   GPL+    +  I+WQL HP G  +E    ++   A+RV
Sbjct:   66 IDLKEKEEKIFRRLLDVVRDFKLETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGREFCEKVNEYLHSIGEEQQGIGVIQCNPDQSKHLETARMRIYDIWIDFVNLRSETYVENSRIPTMKFGTAKEDAYRRDLTINSLFYNINTDSVEDFTGRGVRDL--KTGYIVTPLPPKDTFLDDPLRVLRAIRFGARFGFVLDEDLKKAASDEEVRAAIADKISRERIGHEVDLMFSGN--QPIKAMTYICDLQLFYVVFTFPENPQPSVV----------------------------------------EGCDRHCVSYMDAAWNLLQSTGYSILSDEQRRLYLYGALFLP-VRNTIYEDRK--SKKIPVASYIIRNSLKLKNSDAETVMSLHGALERFFSIISLLES-----------------DGD---SKIVEVKLEDEFLDIPFDSR---IRVLAGLLLRKIKTFWRVALLLSALLYPKVDHAGGPLTNDFETERSREIFVSIDR-------------AISKSGLDNVWEMKPLLDGKAIMSVLQLKSGGPLIREWQERLIKWQLAHPEGTTDECLDWMKQSQAKRV 570          
BLAST of EWM29577.1 vs. NCBI_GenBank
Match: gi|1002309673|ref|XP_015618204.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Oryza sativa Japonica Group] >gi|77553768|gb|ABA96564.1| tRNA-nucleotidyltransferase, putative, expressed [Oryza sativa Japonica Group])

HSP 1 Score: 336.265 bits (861), Expect = 6.917e-104
Identity = 212/583 (36.36%), Postives = 314/583 (53.86%), Query Frame = 0
Query:   14 ITLTEVESHLFGLLNEAAAQVGQGTVLRVAGGWVRDKLLGKESDDVDIALDNVSGAAFAELLNKCLQDKGLETRSIGVIQANPEQSKHLETARVLVLGHWIDFTNLRTETYRADSRIPEISFGTAVEDASRRDFTINSLFYNLQTESVEDWTGQGLADLLGPAGAIRTPLPALTTFLDDPLRLLRAIRFSSRFALPLDANIVAAAENEELQHALFGKVSRERVGLEVEGMLSGKDARPAVALEMLVNLGLSDVVFWMPEEVKTRVLPVGGMEGWAQRGLANVRMANALLMEREKPGIWRDIAEGGTEGSMQGAQGSIQGFMQVVRVTSAYMQPRREH-RLCFLAAMLAPWEKHCMTEDRKPVEKKIGVVQWFVREALKHRAKDAEDLTALFGALDRCQSLTETMGAWSGRATGQEGRKVQKMR-PGDACGTRDVERRRSEEQDNRWRAARLEAGRLLRDLKGLWRTGLDVACARECASLKGGENPTTESPSKRACDISVTLKALYEVQNRYQHTIDAVQGMGLDGIWNLRPLLDGKAVISNLGLPKGPLVGAVMDAQIEWQLQHPRGNAEELTKHLQTLVAER 594
            + LTE E  +F  L +     G GT LRVAGGWVRDKLLGK+S D+DIALDN++G  F E +N+  +  G E + IGVIQ NP+QSKHLETAR+L+   WIDF NLR+E Y  +SRIP +  GTA EDA RRD TINSLF+N+ T +VED TG+G+ DL    G I TPLPA  TFLDDPLR+LRAIRF++RF   L  ++  AA +E+++  L  K+S+ER+G EV+ M+S  D  P  A+  + +LGL  VVF  PE+    V      +   +  ++++ +A  L        I   +  GG++   Q                        EH RLCF +A+  P  ++ +  D+K   KKI V  + +R++LK +A DA+ +  +  A ++   L   + +     T +E    + +  P D+                     R+ AG +LR++K  WR  L +          GG+  +   P +           L++ + +Y      +  + LDG+W ++PLLDGKA++  + +  GPL+G      ++WQL +PRG  EE  + ++   ++R
Sbjct:   87 VELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDL--KKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKERIGHEVDLMMS--DKHPVNAMCYIRDLGLFYVVFAFPEKPDPPV-----PDKCDRLCVSHIEVAWNLAH-----SIGCSVFSGGSDSKSQD-----------------------EHRRLCFYSALFTP-VRNTIYLDKK--SKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDS-------------------VKRVLAGLILREIKDFWRVALFICTLTYPEVSSGGD--SLGQPDE-----------LHQRKEKYTRAERLITELELDGVWKMKPLLDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKR 597          
The following BLAST results are available for this feature:
BLAST of EWM29577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112148|gb|EWM29577.1|0.000e+0100.00trna nucleotidyltransferase [Nannochloropsis gadit... [more]
gi|635367521|emb|CCI44239.1|3.073e-10836.84unnamed protein product [Albugo candida][more]
gi|673022618|ref|XP_008865270.1|2.399e-10737.87hypothetical protein H310_03255 [Aphanomyces invad... [more]
gi|698802212|ref|XP_009834135.1|5.496e-10738.74hypothetical protein H257_09587 [Aphanomyces astac... [more]
gi|1173932745|gb|OQR84657.1|2.449e-10638.87tRNA nucleotidyltransferase [Achlya hypogyna][more]
gi|218186506|gb|EEC68933.1|2.252e-10536.36hypothetical protein OsI_37630 [Oryza sativa Indic... [more]
gi|113648782|dbj|BAF29294.1|6.905e-10536.54Os12g0171200 [Oryza sativa Japonica Group][more]
gi|1002873659|ref|XP_006664379.2|1.447e-10436.49PREDICTED: putative CCA tRNA nucleotidyltransferas... [more]
gi|672116697|ref|XP_008781519.1|5.271e-10437.76PREDICTED: putative CCA tRNA nucleotidyltransferas... [more]
gi|1002309673|ref|XP_015618204.1|6.917e-10436.36PREDICTED: putative CCA tRNA nucleotidyltransferas... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1095rna1095Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications