EWM29523.1, cds1093 (CDS) Nannochloropsis gaditana

Overview
NameEWM29523.1
Unique Namecds1093
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1168532..1170160 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29523.1
Productubiquinone biosynthesis monooxygenase coq6
Orig transcript idgnl|cribi|Naga_100006g73.8612.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1168532..1170160 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR002938mOase_FAD-bd
Homology
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|585112094|gb|EWM29523.1| (ubiquinone biosynthesis monooxygenase coq6 [Nannochloropsis gaditana])

HSP 1 Score: 1095.49 bits (2832), Expect = 0.000e+0
Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0
Query:    1 MIRLLAAVSSFRPLSQRCIGRLFSSTAPHGTSTDSWDYDVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGVNSGGGRQGM 542
            MIRLLAAVSSFRPLSQRCIGRLFSSTAPHGTSTDSWDYDVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGVNSGGGRQGM
Sbjct:    1 MIRLLAAVSSFRPLSQRCIGRLFSSTAPHGTSTDSWDYDVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGVNSGGGRQGM 542          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|669157876|ref|XP_008614500.1| (hypothetical protein SDRG_10294 [Saprolegnia diclina VS20] >gi|530733856|gb|EQC32098.1| hypothetical protein SDRG_10294 [Saprolegnia diclina VS20])

HSP 1 Score: 293.893 bits (751), Expect = 6.774e-90
Identity = 191/498 (38.35%), Postives = 268/498 (53.82%), Query Frame = 0
Query:   39 DVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDRK-RDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFD-TSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALV-GAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            DV+I+GGGIVG++LACSL  N   + G K++++E +PP  + +      LPD RVY++ PAS   LE+ G W  + D+    +Q MQVW+  G G +RFDAAKA                G + + LG + E+  LQ AL   M  L AQ   E    +   A+  +   G +    + V   G + +R     RL+V ADG  S V+   GL +WGW Y Q+A+VAT+                           + +  ATA+Q F P GPLA LPL   Y SIVWS T   AD L A+  E F A LN  L  P     PP+ P     PL+K L+ G H+  ++V+ + A+S  F   P V +V G R SF L+ +HA+ Y     ALVGD+AH++HP+AGQGLN+GLAD  +LS L+  GV  G ++ +P FL+ Y+N R+AAN+ M   +     LFG    +    RN+G+G LNA++PVK ++   AMG+
Sbjct:   43 DVLIVGGGIVGSALACSLKSNPLFK-GKKVSIIETQPPRKVES--EDLGLPDLRVYSITPASKKLLEAAGVWSKMSDKHIAPFQDMQVWDAMGDGFVRFDAAKA----------------GVKDQNLGFIIEHGVLQRALMARMEELAAQDGDEQPLRIHSPAVVRNFLKGNEVCRYSTVHLEGGEELRG----RLVVAADGGQSLVRTLAGLGTWGWSYDQQALVATIK--------------------------TETPHATAYQRFFPTGPLALLPLRDGYTSIVWSCTEDMADELMAMNPEEFQAALNDALFRPSA---PPAIPDV---PLLKDLLTGLHNAAQTVMAAGAMSDPFVAPPRVTEVVGKRFSFPLKLQHATRYTRDCVALVGDSAHSMHPLAGQGLNMGLADVASLSNLLAEGVKTGANISAPTFLQHYENDRKAANVSMSLAMDGFKRLFGPTPDAVGAARNLGMGALNAIEPVKTQIVRYAMGL 485          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|673029588|ref|XP_008868755.1| (ubiquinone biosynthesis monooxygenase COQ6 [Aphanomyces invadans] >gi|574475150|gb|ETW02150.1| ubiquinone biosynthesis monooxygenase COQ6 [Aphanomyces invadans])

HSP 1 Score: 290.812 bits (743), Expect = 1.037e-88
Identity = 186/492 (37.80%), Postives = 251/492 (51.02%), Query Frame = 0
Query:   50 ASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIK-DRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQ---GLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAG----KDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            ++LAC+L  N    HG K+ ++E  PP  L    AP  +PD RVY + PAS    E++G W  IK +    + +MQVW+  G G IRFDAAKA+V               K  + LG + E+  LQ AL   M  L +Q     L+VL P +V             GP  V  AG    +DG   ++ +RL+V ADG  S ++K   L +WGW Y Q+AVVATV  D+                             TAWQ FLP GP+A LPL   Y S+VWST    A  LK++  E F+AELN  L  P     PP  P      L     G H   ++V+ + AL+  F   P   +  G R+SF L+ +HA+ Y     AL+GD+AH+IHP+AGQGLNLGLAD  +L  L+  GV  G  +G   FL+ Y N R+ AN+ M   +     LFG    +    RNVG+ +LNA+DPVK ++ + AMG+
Sbjct:   54 SALACNLKSN-PVFHGKKVTVIEPSPPNKLDDANAPLGIPDARVYTITPASKKLFEAIGVWDKIKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQV---------------KNGRDLGYVLEHGVLQRALALRMEELASQDDPNPLQVLSPAEVRNF---------EGPGEVQRAGIVHLEDG--REIRSRLVVAADGGKSMIRKLSALGTWGWTYDQQAVVATVKTDQIN--------------------------TTAWQRFLPSGPIALLPLRDGYSSVVWSTNENHAIELKSISPEEFVAELNEALNKPSETPSPPQIPI-----LGNLFQGIHLAAQTVLAAGALADPFQSPPKATEAVGRRVSFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNLLSQGVQAGVHLGDEQFLQNYDNDRKKANISMALAMDGFKNLFGPAPDAVLVARNVGMSSLNAVDPVKTQIMKYAMGL 487          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|1173947318|gb|OQR95655.1| (ubiquinone biosynthesis monooxygenase [Thraustotheca clavata])

HSP 1 Score: 287.345 bits (734), Expect = 2.002e-87
Identity = 188/498 (37.75%), Postives = 266/498 (53.41%), Query Frame = 0
Query:   39 DVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDRK-RDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFD-TSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALV-GAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            DV+I+GGGIVG++LACSL  N   + G K+A++E +PP  + +      +PD RVY++ PAS   LES G W  +  +    +  MQVW+  G G +RFDAAKA                G + + LG + E+  LQ AL + M  L AQ   +    +   AI  +   G +    + V     + +R     RL+V ADG  S ++   GL +WGW Y Q+A+VAT+  ++           P TT               A+Q F P GPLA LPL   Y SIVWS T   AD L A+  E F A LN  L  P     PP+ P     P++K L+ G H+  ++V+ + ALS  F   P V +V G R +F L+ +HA+ Y     ALVGD+AH++HP+AGQGLN+GLAD  +LS L+  GV  G ++ SP FL  Y+N R+ AN+ M   +     LFG    +   +RN+G+G LNA++PVK ++   AMG+
Sbjct:   39 DVLIVGGGIVGSALACSLKSNPLFK-GKKVAIIETQPPRKVES--EDLGIPDLRVYSITPASKRLLESAGVWNKLNQKHIAPFHDMQVWDAMGDGFVRFDAAKA----------------GVKDQNLGYIIEHGVLQRALMERMEELAAQDDDDKPLRIHTPAIVRNFLKGNEVCRYSSVYLESGEELRG----RLVVAADGGQSLIRTIAGLGTWGWSYDQQALVATIKTEQ-----------PHTT---------------AFQRFFPTGPLALLPLRDGYTSIVWSCTEDLADELMAMNPEEFQAALNDALFRPSS---PPAVPDV---PVLKDLLTGLHNAAQTVMAAGALSDPFVAPPRVTEVVGKRFAFPLKLQHATRYTRDCVALVGDSAHSMHPLAGQGLNMGLADVASLSALLSEGVKSGTNISSPTFLEVYENDRKKANVSMSLAMDGFKRLFGPAPDAVGAVRNLGMGALNAIEPVKTQIIRYAMGL 481          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|1173950109|gb|OQR98088.1| (ubiquinone biosynthesis monooxygenase [Achlya hypogyna])

HSP 1 Score: 283.878 bits (725), Expect = 4.602e-86
Identity = 189/500 (37.80%), Postives = 266/500 (53.20%), Query Frame = 0
Query:   39 DVIILGGGIVGASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRL--PDPRVYALAPASVAFLESLGAWQLIKDRK-RDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFD-TSGTDPTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALV-GAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            DV+I+GGGIVG++LACSL  N   + G K++++E +PP  +      D L  PD RVY++ PAS   LE+ G W  + D+    ++ MQVW+  G G +RFDAAKA                G + + LG + E+  LQ AL   M  L A    +    +   AI  +   G +    + V     + +R     RL+V ADG  S V+   GL +WGW Y Q+A+VAT+  ++                            ATA+Q F P GPLA LPL   Y SIVWS T   AD L A+  E F A LN  L  P     PP+ P     P++K L+ G H+  ++V+ + ALS  F   P V +V G R +F L+ +HA+ Y     ALVGD+AH++HP+AGQGLN+GLAD  +LS+L+E GV  G ++ SP FL  Y+  R+AAN+ M   +     LFG    +    RN+G+G LNA++PVK ++   AMG+
Sbjct:   40 DVLIVGGGIVGSALACSLKSNPLFK-GKKVSIIETQPPRKVEG----DDLGLPDLRVYSITPASKKLLEAAGVWSKMSDKHVAPFKDMQVWDAMGDGFVRFDAAKA----------------GVKDQNLGYIIEHGVLQRALMARMEELAAAEADDQPLRIHTPAIVRNFLKGNEVCRYSTVHLESGEELRG----RLVVAADGGQSLVRTLAGLGTWGWSYDQQALVATIKTEQPH--------------------------ATAFQRFFPTGPLALLPLRDGYTSIVWSCTEDLADELMAMNPEEFQAALNDALFRPSA---PPAIPDV---PVLKDLLTGLHNAAQTVMAAGALSDPFVAPPRVTEVVGKRFAFPLKLQHATRYTRDCVALVGDSAHSMHPLAGQGLNMGLADVASLSSLLEEGVKTGTNISSPTFLDLYEKDRKAANVTMSLAMDGFKRLFGPTPDAVGAARNLGMGALNAIEPVKTQIIRYAMGL 482          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|698801596|ref|XP_009833827.1| (ubiquinone biosynthesis monooxygenase COQ6, variant 3 [Aphanomyces astaci] >gi|574111421|gb|ETV76917.1| ubiquinone biosynthesis monooxygenase COQ6, variant 3 [Aphanomyces astaci])

HSP 1 Score: 281.952 bits (720), Expect = 2.281e-85
Identity = 181/492 (36.79%), Postives = 251/492 (51.02%), Query Frame = 0
Query:   50 ASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIK-DRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQ---GLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAG----KDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            ++LAC+L  N    HG K+ ++E  PP  L    A   LPD RVY + PAS    E++G W  IK +    + +MQVW+  G G IRFDAAKA+V               K    LG + E+  LQ AL   M  L  Q     L +L P +V             GP  V  AG    +DG  +++ +RL+V ADG  S ++K   L +WGW Y Q+AVVATV  D+                             TA+Q FLP GP+A LPL   Y S+VWSTT   A  LK++  + F+A LN  L  P     PP  P      L   + G H   ++V+ + AL+  F   P   +  G R++F L+ +HA+ Y     AL+GD+AH+IHP+AGQGLNLGLAD  +L  ++  GV  G  +G  LFL+ Y N R+ AN+ M   +     LFG    + +  RNVG+ TLNA++P+K ++ + AMG+
Sbjct:   54 SALACNLKSN-PVFHGKKVTVIEPSPPKQLEDANASLGLPDARVYTITPASKKLFEAIGVWDKIKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQV---------------KSGSDLGYVLEHGVLQRALALRMQELAGQDDPNPLRILSPAEVRNF---------EGPGEVHRAGTVTLEDG--TEIRSRLVVAADGGKSMIRKLSALGTWGWTYDQQAVVATVKTDQIN--------------------------TTAFQRFLPSGPIALLPLRDGYSSVVWSTTENHAIELKSISPQEFVAALNEALHKPSVTPSPPQVPL-----LGNLIQGIHLAAQTVLAAGALADPFQAPPKATEAVGRRIAFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNVLSQGVQAGVHLGDELFLKHYDNDRKKANISMALAMDGFKNLFGPAPDAVQVARNVGMSTLNAVEPIKTQIMKYAMGL 487          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|698801594|ref|XP_009833826.1| (ubiquinone biosynthesis monooxygenase COQ6, variant 1 [Aphanomyces astaci] >gi|574111419|gb|ETV76915.1| ubiquinone biosynthesis monooxygenase COQ6, variant 1 [Aphanomyces astaci])

HSP 1 Score: 282.337 bits (721), Expect = 3.480e-85
Identity = 183/503 (36.38%), Postives = 254/503 (50.50%), Query Frame = 0
Query:   50 ASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIK-DRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQ---GLLEVLCPVQVEA-----------IAFDTSGTDPTGPARVTWAG----KDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMGV 533
            ++LAC+L  N    HG K+ ++E  PP  L    A   LPD RVY + PAS    E++G W  IK +    + +MQVW+  G G IRFDAAKA+V               K    LG + E+  LQ AL   M  L  Q     L +L P +V A             F     +  GP  V  AG    +DG  +++ +RL+V ADG  S ++K   L +WGW Y Q+AVVATV  D+                             TA+Q FLP GP+A LPL   Y S+VWSTT   A  LK++  + F+A LN  L  P     PP  P      L   + G H   ++V+ + AL+  F   P   +  G R++F L+ +HA+ Y     AL+GD+AH+IHP+AGQGLNLGLAD  +L  ++  GV  G  +G  LFL+ Y N R+ AN+ M   +     LFG    + +  RNVG+ TLNA++P+K ++ + AMG+
Sbjct:   54 SALACNLKSN-PVFHGKKVTVIEPSPPKQLEDANASLGLPDARVYTITPASKKLFEAIGVWDKIKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQV---------------KSGSDLGYVLEHGVLQRALALRMQELAGQDDPNPLRILSPAEVHAPSSSTSSSPYLTMFHHQVRNFEGPGEVHRAGTVTLEDG--TEIRSRLVVAADGGKSMIRKLSALGTWGWTYDQQAVVATVKTDQIN--------------------------TTAFQRFLPSGPIALLPLRDGYSSVVWSTTENHAIELKSISPQEFVAALNEALHKPSVTPSPPQVPL-----LGNLIQGIHLAAQTVLAAGALADPFQAPPKATEAVGRRIAFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNVLSQGVQAGVHLGDELFLKHYDNDRKKANISMALAMDGFKNLFGPAPDAVQVARNVGMSTLNAVEPIKTQIMKYAMGL 507          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|298712537|emb|CBJ26805.1| (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase [Ectocarpus siliculosus])

HSP 1 Score: 281.952 bits (720), Expect = 2.899e-84
Identity = 196/511 (38.36%), Postives = 250/511 (48.92%), Query Frame = 0
Query:   68 IALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQ----LIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEAIAFDTSGTD-PTGPARVTWAGKDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPL-WGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCP--IGLLDPPSFPSYVPQPLVKALVGAHHLVESV--------VVSAALSQG------------------------------FHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMG 532
            + L+E RPPP L A LA    PDPRVY+LAP+SV  L  LG W     ++K R + +  MQVW+  G+G +RFD                  G+G +   LG ++E+  + ++LF+ +  L+A GL E+ CP QV+ + F   G    TGP  VT     G  S  T RLLV ADG  S+V K  GL S+GW Y QRAVVATV L E                     SH       A+Q +L +GPLA LPL  G   S+VWSTTP  A+ LK++    F+ E+N  L+ P  IG     S         V    G H L   V          ++AL +G                              F   P   +V  PRL FDL    A  Y G R ALVGDAAHT+HPMAGQGLNLG+ADA AL+  +  G + G DVGS   L RY+  R+   L M+G L  LH LFG    +    R+ GL  LNA  P+K ++A  AMG
Sbjct:  104 VGLIEARPPPSLEAALARG-APDPRVYSLAPSSVEILGKLGVWDEGGGVLKGRSQPFGGMQVWDDRGAGHLRFDG----------------EGKGGKTTALGFISEHGVIHSSLFERVRELEADGLAELTCPAQVKRVTFPPVGAGGATGPLTVTVETASGETSDTTCRLLVAADGGDSKVAKMMGLSSFGWGYGQRAVVATVKLAE---------------------SHGE----VAFQRYLSRGPLAMLPLPGGKLASLVWSTTPEHAESLKSMSTTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGEHGLFGGVSSLAALPFATASALGEGVAKGAEGIAGALAGLSLGLQEGAGDGGRGGFCTPPEATEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMG 572          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|698801598|ref|XP_009833828.1| (ubiquinone biosynthesis monooxygenase COQ6, variant 2 [Aphanomyces astaci] >gi|574111420|gb|ETV76916.1| ubiquinone biosynthesis monooxygenase COQ6, variant 2 [Aphanomyces astaci])

HSP 1 Score: 276.944 bits (707), Expect = 2.694e-83
Identity = 179/485 (36.91%), Postives = 245/485 (50.52%), Query Frame = 0
Query:   50 ASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIK-DRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQ---GLLEVLCPVQVEAIAFDTSGTDPTGPARVTWAG----KDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKM 526
            ++LAC+L  N    HG K+ ++E  PP  L    A   LPD RVY + PAS    E++G W  IK +    + +MQVW+  G G IRFDAAKA+V               K    LG + E+  LQ AL   M  L  Q     L +L P +V             GP  V  AG    +DG  +++ +RL+V ADG  S ++K   L +WGW Y Q+AVVATV  D+                             TA+Q FLP GP+A LPL   Y S+VWSTT   A  LK++  + F+A LN  L  P     PP  P      L   + G H   ++V+ + AL+  F   P   +  G R++F L+ +HA+ Y     AL+GD+AH+IHP+AGQGLNLGLAD  +L  ++  GV  G  +G  LFL+ Y N R+ AN+ M   +     LFG    + +  RNVG+ TLNA++P+K  M
Sbjct:   54 SALACNLKSN-PVFHGKKVTVIEPSPPKQLEDANASLGLPDARVYTITPASKKLFEAIGVWDKIKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQV---------------KSGSDLGYVLEHGVLQRALALRMQELAGQDDPNPLRILSPAEVRNF---------EGPGEVHRAGTVTLEDG--TEIRSRLVVAADGGKSMIRKLSALGTWGWTYDQQAVVATVKTDQIN--------------------------TTAFQRFLPSGPIALLPLRDGYSSVVWSTTENHAIELKSISPQEFVAALNEALHKPSVTPSPPQVPL-----LGNLIQGIHLAAQTVLAAGALADPFQAPPKATEAVGRRIAFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNVLSQGVQAGVHLGDELFLKHYDNDRKKANISMALAMDGFKNLFGPAPDAVQVARNVGMSTLNAVEPIKVYM 480          
BLAST of EWM29523.1 vs. NCBI_GenBank
Match: gi|698801602|ref|XP_009833830.1| (ubiquinone biosynthesis monooxygenase COQ6 [Aphanomyces astaci] >gi|574111418|gb|ETV76914.1| ubiquinone biosynthesis monooxygenase COQ6 [Aphanomyces astaci])

HSP 1 Score: 277.33 bits (708), Expect = 3.936e-83
Identity = 181/496 (36.49%), Postives = 248/496 (50.00%), Query Frame = 0
Query:   50 ASLACSLAENVGQRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIK-DRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQ---GLLEVLCPVQVEA-----------IAFDTSGTDPTGPARVTWAG----KDGVRSQVTTRLLVGADGAASRVKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPLWGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCPIGLLDPPSFPSYVPQPLVKALVGAHHLVESVVVSAALSQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKM 526
            ++LAC+L  N    HG K+ ++E  PP  L    A   LPD RVY + PAS    E++G W  IK +    + +MQVW+  G G IRFDAAKA+V               K    LG + E+  LQ AL   M  L  Q     L +L P +V A             F     +  GP  V  AG    +DG  +++ +RL+V ADG  S ++K   L +WGW Y Q+AVVATV  D+                             TA+Q FLP GP+A LPL   Y S+VWSTT   A  LK++  + F+A LN  L  P     PP  P      L   + G H   ++V+ + AL+  F   P   +  G R++F L+ +HA+ Y     AL+GD+AH+IHP+AGQGLNLGLAD  +L  ++  GV  G  +G  LFL+ Y N R+ AN+ M   +     LFG    + +  RNVG+ TLNA++P+K  M
Sbjct:   54 SALACNLKSN-PVFHGKKVTVIEPSPPKQLEDANASLGLPDARVYTITPASKKLFEAIGVWDKIKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQV---------------KSGSDLGYVLEHGVLQRALALRMQELAGQDDPNPLRILSPAEVHAPSSSTSSSPYLTMFHHQVRNFEGPGEVHRAGTVTLEDG--TEIRSRLVVAADGGKSMIRKLSALGTWGWTYDQQAVVATVKTDQIN--------------------------TTAFQRFLPSGPIALLPLRDGYSSVVWSTTENHAIELKSISPQEFVAALNEALHKPSVTPSPPQVPL-----LGNLIQGIHLAAQTVLAAGALADPFQAPPKATEAVGRRIAFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNVLSQGVQAGVHLGDELFLKHYDNDRKKANISMALAMDGFKNLFGPAPDAVQVARNVGMSTLNAVEPIKVYM 500          
The following BLAST results are available for this feature:
BLAST of EWM29523.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112094|gb|EWM29523.1|0.000e+0100.00ubiquinone biosynthesis monooxygenase coq6 [Nannoc... [more]
gi|669157876|ref|XP_008614500.1|6.774e-9038.35hypothetical protein SDRG_10294 [Saprolegnia dicli... [more]
gi|673029588|ref|XP_008868755.1|1.037e-8837.80ubiquinone biosynthesis monooxygenase COQ6 [Aphano... [more]
gi|1173947318|gb|OQR95655.1|2.002e-8737.75ubiquinone biosynthesis monooxygenase [Thraustothe... [more]
gi|1173950109|gb|OQR98088.1|4.602e-8637.80ubiquinone biosynthesis monooxygenase [Achlya hypo... [more]
gi|698801596|ref|XP_009833827.1|2.281e-8536.79ubiquinone biosynthesis monooxygenase COQ6, varian... [more]
gi|698801594|ref|XP_009833826.1|3.480e-8536.38ubiquinone biosynthesis monooxygenase COQ6, varian... [more]
gi|298712537|emb|CBJ26805.1|2.899e-8438.36Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
gi|698801598|ref|XP_009833828.1|2.694e-8336.91ubiquinone biosynthesis monooxygenase COQ6, varian... [more]
gi|698801602|ref|XP_009833830.1|3.936e-8336.49ubiquinone biosynthesis monooxygenase COQ6 [Aphano... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1094rna1094Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications