EWM29560.1, cds1092 (CDS) Nannochloropsis gaditana

Overview
NameEWM29560.1
Unique Namecds1092
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1167121..1168242 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29560.1
Product3-methyl-2-oxobutanoate hydroxymethyltransferase
Orig transcript idgnl|cribi|Naga_100006g74.8649.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1167121..1168242 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0015940pantothenate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR015813Pyrv/PenolPyrv_Kinase-like_dom
IPR003700Pantoate_hydroxy_MeTrfase
Homology
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|585112131|gb|EWM29560.1| (3-methyl-2-oxobutanoate hydroxymethyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
Query:    1 MNTWLSTRHNFWRLSRPKNRLHSYQCSRSFAASPPAESLAPAGGPRASARPPLGGNASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            MNTWLSTRHNFWRLSRPKNRLHSYQCSRSFAASPPAESLAPAGGPRASARPPLGGNASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY
Sbjct:    1 MNTWLSTRHNFWRLSRPKNRLHSYQCSRSFAASPPAESLAPAGGPRASARPPLGGNASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|1210518216|dbj|GAX22828.1| (3-methyl-2-oxobutanoate hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 431.409 bits (1108), Expect = 6.463e-148
Identity = 210/327 (64.22%), Postives = 259/327 (79.20%), Query Frame = 0
Query:   59 SKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRS----------LIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGR-DRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            + K+S L L  KKR   +I+MVTAYDYPSA+HV  AGIDIVL GDSVAMVELG+ TTQP+ +E MLHHC+AV RG +++          L+VGDMPF SYE  + ++A+ NA+RFI+E   DAVK+EGG   RA    K+V+ G+AVMGHVGLTPQ+ISVLGGFRAQGRTA++AR ++DDAL LQ+AG FAVV+ECVP+ VA AITE+LEIPTIGIGAG HT GQVLVFHDMLGMT+HPHHE FVP+FCKRYAQLG++I+EGL+ FK+DVE+G FP+E YSPY+M   E R F+AL+AQD   R+T    AAE+  Q+DEYE++ LY
Sbjct:   26 ATKISALSLTSKKRHGHKITMVTAYDYPSAMHVARAGIDIVLVGDSVAMVELGHPTTQPMTLEAMLHHCQAVRRGVQQANNNNHNNAEPLLVGDMPFASYEYEDTDIALRNAYRFIQEAGMDAVKLEGGSVARARTARKLVEGGVAVMGHVGLTPQSISVLGGFRAQGRTAIRARAVLDDALRLQDAGCFAVVLECVPSNVAAAITESLEIPTIGIGAGNHTSGQVLVFHDMLGMTSHPHHEQFVPKFCKRYAQLGHIIQEGLQEFKRDVESGAFPNEEYSPYQMKENERRDFEALLAQDQEERETHHLAAAEKYIQTDEYEKLHLY 352          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|299470315|emb|CBN78365.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 424.091 bits (1089), Expect = 2.042e-145
Identity = 203/307 (66.12%), Postives = 246/307 (80.13%), Query Frame = 0
Query:   65 LDLLHKKRKNQR-ISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQI 370
            +D++  +R+ +R ++MVTAYDYPSA+HV  AGIDI+L GDSV MVELGYDTTQPV +  MLHHCKAV RG +  L+V DMPFGSYEVS + A+  A RF+KEG  DAVK+EGG++RA  + K+V  GIAVMGHVGLTPQAISVLGGFRAQGRTAVKAR +VDDALA+QEAGAFAVVVECVP+PVA+A+TEALEIPTIGIGAGP T GQVLV+HDMLGM  HPHH  FVPRFCK YA +G  +R GLE+F+++VE G FP E +SPYKMPA E + F+ L+A+D   R  +     + L++ DEYE +
Sbjct:    1 MDVVKIRRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKMPAGEEQQFKRLLAKDEHERLERLALKKKALEEQDEYETV 307          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|1210528893|dbj|GAX12536.1| (3-methyl-2-oxobutanoate hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 416.772 bits (1070), Expect = 8.104e-143
Identity = 201/303 (66.34%), Postives = 248/303 (81.85%), Query Frame = 0
Query:   79 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRS------LIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGR-DRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            MVTAYDYPSA+HV  AGIDIVL GDS+AMVELG+ TTQP+ ++ MLHHC+AV RG +++      L+VGDMPF SYE  + ++A+ NA+RFI+E   DAVK+EGG   RA    K+V+ G+AVMGHVGLTPQAISVLGGFRAQGRTAV+AR ++DDAL LQ+AG FA+V+ECVP+ VA AITE+LEIPTIGIGAG HT GQVLVFHDMLGMT+HPHHE FVP+FCKRYAQLG++I+EGL+ FK+DVE+G FPS+ Y+PY+M   E R F+AL+AQD   R+TQ   AAE+  Q+DEYE++ LY
Sbjct:    1 MVTAYDYPSAMHVARAGIDIVLVGDSLAMVELGHITTQPITLDAMLHHCQAVRRGVQQAQVQEEPLLVGDMPFASYEYEDTDVALRNAYRFIQEAGMDAVKLEGGSVARARTARKLVEGGVAVMGHVGLTPQAISVLGGFRAQGRTAVRARAILDDALRLQDAGCFAIVLECVPSNVAAAITESLEIPTIGIGAGGHTSGQVLVFHDMLGMTSHPHHEQFVPKFCKRYAQLGHIIQEGLQEFKRDVESGAFPSDEYAPYQMKENERRDFEALLAQDQEERETQHLAAAEKYIQTDEYEKLHLY 303          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|397626867|gb|EJK68270.1| (hypothetical protein THAOC_10568 [Thalassiosira oceanica])

HSP 1 Score: 395.971 bits (1016), Expect = 4.393e-133
Identity = 193/333 (57.96%), Postives = 249/333 (74.77%), Query Frame = 0
Query:   44 GPRASARPPLGGNASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGT-KRSLIVGDMPFGSYE-VSEELAMTNAFRFIKEGFTDAVKIEGGR-DRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            G  +++ PP   +A  KK++ L +  KKR+NQ+I+MVTAYDYPSA+HVD AGIDI+L GDS AMVELGY+TTQP+ +EQMLHHC+A  RG   R L+VGDMPFG+YE +  ++A+ NA+R +KEG  DAVK EGG   RA  V  +V+ G+AVMGHVGL PQ+ISV+GGFRAQGRTA +A  ++++AL LQ+AGAFAVV+EC+P+ VA  IT+ LEIPTIGIGAGPHT GQVLVFHD+LGM +HPHHE FVP+FCK+YA +G  I EGL+SF+QDVE G FP + YSPYKM A E   F+ ++    +    ++        Q +E + + LY
Sbjct:   85 GSNSTSEPPPP-SARPKKVTTLTIRAKKRRNQKITMVTAYDYPSAVHVDRAGIDILLVGDSCAMVELGYETTQPMTLEQMLHHCRAAKRGAPDRPLLVGDMPFGTYEFMDSDVALRNAYRLVKEGGMDAVKFEGGSASRARAVRHVVEGGVAVMGHVGLLPQSISVVGGFRAQGRTAERAGQILEEALRLQDAGAFAVVLECIPSNVANIITDRLEIPTIGIGAGPHTSGQVLVFHDLLGMLSHPHHEEFVPKFCKKYASVGLAINEGLDSFRQDVEGGVFPGDGYSPYKMSAEETLRFEKMLEGSLSGDMRKSES-----PQGEEIDDLSLY 411          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|219110457|ref|XP_002176980.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411515|gb|EEC51443.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 387.111 bits (993), Expect = 1.390e-131
Identity = 186/285 (65.26%), Postives = 231/285 (81.05%), Query Frame = 0
Query:   61 KMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARG--------TKRSLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGG-RDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAE 335
            K+S L L  K+R  ++ISMVTAYDYPSA+HV  AG+DI+L GDSVAMVELGY+ TQP+ +  MLHHC  V RG        ++  L+VGDMPFG+YE  + ++A+ NA+ F+KE   DAVK+EGG + RA   ++IV+ G+AVMGHVGLTPQAISVLGGFRAQGRTAV+AR LVD+AL LQ+AG FAVV+ECVP+ VA++IT+ LEIPTIGIGAGPHT GQVLV+HDMLGMT+HPHH+ FVP+FCK+YAQ+G++I+EGL  FK DVE GTFPS+A+SPY M  AE
Sbjct:    3 KVSALSLTSKRRHGKKISMVTAYDYPSAVHVARAGMDILLVGDSVAMVELGYENTQPITLRDMLHHCATVKRGVTAVASQVSQVPLLVGDMPFGTYEYQDTDVALRNAYAFVKEAGMDAVKLEGGSKARAQTAQRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRTAVRARQLVDEALRLQDAGVFAVVLECVPSNVARSITDTLEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHDQFVPKFCKKYAQVGHMIQEGLLEFKADVENGTFPSDAFSPYVMTDAE 287          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|223998806|ref|XP_002289076.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976184|gb|EED94512.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 386.341 bits (991), Expect = 3.165e-130
Identity = 195/320 (60.94%), Postives = 244/320 (76.25%), Query Frame = 0
Query:   57 ASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGT-KRSLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGRD-RAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            A  +K++ L +  KKR+  +I+MVTAYDYPSALHVD AGID+VL GDS AMVELG+DTTQP+ ++QM+HHC+AV RG   R L++GDMPFGSYE    ++A+ NA+R +KEG  DAVK EGG + RA IV  +V+ G+AV+GH+GLTPQAISVLGGFRAQGRTA++AR LVDDAL LQEAGAFA+V+EC+PA VA AIT+AL+IPTIGIGAG    GQVLVFHD+LGMT+HPHHE FVP+FCK+YA++G  I +GL  FKQ+VE G+FP E+YSPY M   E   F  L+ +D    +T   +  E      E E + LY
Sbjct:   37 AKPRKVTTLTIAAKKRRGHKITMVTAYDYPSALHVDRAGIDVVLVGDSCAMVELGFDTTQPITLDQMIHHCQAVKRGAPNRPLLIGDMPFGSYEYENVDIALKNAYRMVKEGGMDAVKFEGGSESRAKIVRHVVEGGVAVLGHIGLTPQAISVLGGFRAQGRTALRARSLVDDALRLQEAGAFAIVLECIPANVAIAITQALDIPTIGIGAGGGCSGQVLVFHDLLGMTSHPHHEEFVPKFCKQYAKVGMEINDGLAQFKQEVEDGSFPGESYSPYIMMKEEEAIFDKLLKRDVEKERTTQDKVME------EEESLSLY 350          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|1214709185|gb|OWZ20389.1| (3-methyl-2-oxobutanoate hydroxymethyltransferase [Phytophthora megakarya])

HSP 1 Score: 382.489 bits (981), Expect = 9.377e-129
Identity = 183/291 (62.89%), Postives = 227/291 (78.01%), Query Frame = 0
Query:   60 KKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSR 350
            +K+S LD+   KRK + I+MVTAYDYPSA+HVDLAG DI+L GDS+ MVELG DTT PV +E M+HH +AV RG  R L++ DMPFG+ E +   A+ NA R +KEG  D VKIEGG++RA  ++ IV  GIAVMGHVGL PQ ISVLGGFRAQGRTA +AR ++DDALA+Q+AGAFAVV+ECVP+ VA+A+TE L+IPTIGIGAGP T GQVLVFHD+LGM  HPHH  FVP+FCKRYA +G  IR GLE+++ DVE+G F SEAYSPYKM   E +    L+A++ + +
Sbjct:   47 RKVSTLDIGIFKRKQKPITMVTAYDYPSAVHVDLAGFDILLVGDSLGMVELGMDTTLPVTLEDMIHHTQAVKRGANRPLVITDMPFGTCEGTPFEALKNAQRLMKEGGADCVKIEGGKERAETIKTIVDGGIAVMGHVGLRPQHISVLGGFRAQGRTAAQARMIIDDALAVQKAGAFAVVLECVPSAVAKAVTEILKIPTIGIGAGPETDGQVLVFHDLLGMLQHPHHAQFVPKFCKRYADVGEQIRIGLENYRDDVESGRFSSEAYSPYKMSKEETQKLHDLVAEEYSQK 337          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|1072229282|gb|OEU14017.1| (putative 3-methyl-2-oxobutanoate hydroxymethyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 380.563 bits (976), Expect = 1.997e-128
Identity = 193/318 (60.69%), Postives = 248/318 (77.99%), Query Frame = 0
Query:   61 KMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKR----SLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
            K+S L L  KKRK ++I+MVTAYD+PSA HV  AGIDI+L GDSVAMVELG++TTQ V ++ M+HHC++V  G +     S+++GDMPFG+YE ++ ++A+ NA+RF+KE   DAVK+E    RA   +KI++ G+AVMGHVGLTPQAISV+GGFRAQGRTAV+AR L+D+AL LQ+AG F++V+ECVPA VA AITE LEIPTIGIGAG  T GQVLVFHDMLGM +HPHH+ FVP+FCK+YA++G+ I+EGL  FK +VE+G FP +AYSPY M   E   F AL+  DA  R+ +   AA +L Q+DEYE +KLY
Sbjct:    3 KVSALSLNSKKRKGKKITMVTAYDFPSAAHVARAGIDIILVGDSVAMVELGHETTQNVSLDSMIHHCQSVKNGIELADSGSMLIGDMPFGTYEFNDTDIALRNAYRFVKEAGCDAVKLEY---RALTAQKIIEGGVAVMGHVGLTPQAISVIGGFRAQGRTAVRARQLLDEALRLQDAGCFSIVLECVPANVAAAITETLEIPTIGIGAGGGTSGQVLVFHDMLGMLSHPHHQQFVPKFCKKYAEVGHSIQEGLNQFKSEVESGVFPGDAYSPYVMSEGEKETFDALLESDAEDRRMKHDAAATKLSQADEYETLKLY 317          
BLAST of EWM29560.1 vs. NCBI_GenBank
Match: gi|1173945133|gb|OQR93798.1| (3-methyl-2-oxobutanoate hydroxymethyltransferase [Thraustotheca clavata])

HSP 1 Score: 379.793 bits (974), Expect = 5.319e-128
Identity = 178/284 (62.68%), Postives = 227/284 (79.93%), Query Frame = 0
Query:   60 KKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALM 343
            KK++ LD+   KRKN+ I+MVTAYDYPSA+HVDLAG D++L GDSV MVELG DTT PV ++ +++HCKAVARG KR L+V DMPFG+ E     A+ NA R +KEG  D VK+EGG +RA  ++ +V+ GIAVMGHVGL PQAISVLGGFRAQGRTA +A  +++DALA+Q AGAFAVV+ECVP+ VA+A+T+ L+IPTIGIG+GP+T GQVLVFHD+LGM THPHH  FVP+FCK+YA +G  IR GLE++++DVE   FP+E Y+PYKM + E    +AL+
Sbjct:   27 KKVTTLDIGILKRKNKPITMVTAYDYPSAVHVDLAGFDVLLIGDSVGMVELGMDTTIPVTLDDIIYHCKAVARGAKRPLLVADMPFGTCEGHRFDALKNAQRLMKEGGVDCVKVEGGAERAETIKTLVEGGIAVMGHVGLRPQAISVLGGFRAQGRTAKQAEQIIEDALAVQNAGAFAVVIECVPSVVAKAVTDILDIPTIGIGSGPNTSGQVLVFHDLLGMLTHPHHAQFVPKFCKKYADVGESIRVGLENYREDVENNRFPNEEYAPYKMSSDEQVKLKALV 310          
The following BLAST results are available for this feature:
BLAST of EWM29560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112131|gb|EWM29560.1|0.000e+0100.003-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
gi|1210518216|dbj|GAX22828.1|6.463e-14864.223-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
gi|299470315|emb|CBN78365.1|2.042e-14566.12conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210528893|dbj|GAX12536.1|8.104e-14366.343-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
gi|397626867|gb|EJK68270.1|4.393e-13357.96hypothetical protein THAOC_10568 [Thalassiosira oc... [more]
gi|219110457|ref|XP_002176980.1|1.390e-13165.26predicted protein, partial [Phaeodactylum tricornu... [more]
gi|223998806|ref|XP_002289076.1|3.165e-13060.94predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1214709185|gb|OWZ20389.1|9.377e-12962.893-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
gi|1072229282|gb|OEU14017.1|1.997e-12860.69putative 3-methyl-2-oxobutanoate hydroxymethyltran... [more]
gi|1173945133|gb|OQR93798.1|5.319e-12862.683-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1093rna1093Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications