EWM29591.1, cds1090 (CDS) Nannochloropsis gaditana

Overview
NameEWM29591.1
Unique Namecds1090
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1162976..1164736 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29591.1
Productmitochondrial chloroplast ribosome small subunit component
Orig transcript idgnl|cribi|Naga_100006g76.8680.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1162976..1164736 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0005507copper ion binding
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR007533Cyt_c_oxidase_assmbl_CtaG
IPR015324Ribosomal_Rsm22_bac-type
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|585112162|gb|EWM29591.1| (mitochondrial chloroplast ribosome small subunit component [Nannochloropsis gaditana])

HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0
Query:    1 MLGRLLIRKRPSPNFVIRPPLVQPPGCLVLPSTKQHSSSTSPTPALKHVSLVPADNDNEEREADLREERTALGKALLDPAWMHGRRALAAPPVEGLDRINDVSRLLSGRQIRLHASRLNRSKRESGLATERSRRPLKLKDGGLQEEEDAGGESGESIDKGTKNKSHGPKYVKEEKTTIEGHDAEEERQMIEGESEKPGYTIRKPAWTGRVASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPDV 586
            MLGRLLIRKRPSPNFVIRPPLVQPPGCLVLPSTKQHSSSTSPTPALKHVSLVPADNDNEEREADLREERTALGKALLDPAWMHGRRALAAPPVEGLDRINDVSRLLSGRQIRLHASRLNRSKRESGLATERSRRPLKLKDGGLQEEEDAGGESGESIDKGTKNKSHGPKYVKEEKTTIEGHDAEEERQMIEGESEKPGYTIRKPAWTGRVASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPDV
Sbjct:    1 MLGRLLIRKRPSPNFVIRPPLVQPPGCLVLPSTKQHSSSTSPTPALKHVSLVPADNDNEEREADLREERTALGKALLDPAWMHGRRALAAPPVEGLDRINDVSRLLSGRQIRLHASRLNRSKRESGLATERSRRPLKLKDGGLQEEEDAGGESGESIDKGTKNKSHGPKYVKEEKTTIEGHDAEEERQMIEGESEKPGYTIRKPAWTGRVASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPDV 586          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|553183905|ref|XP_005853989.1| (methyltransferase-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295069|gb|EKU22368.1| methyltransferase-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 344.354 bits (882), Expect = 2.148e-113
Identity = 172/177 (97.18%), Postives = 175/177 (98.87%), Query Frame = 0
Query:  217 LAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGG 393
            +AYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAM+DLTKHVVETGGKDQ GRGDRLVLHRHLPPL+AQSGRSQLRFDVVFASWTLSELPSD SRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGG
Sbjct:    1 MAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMRDLTKHVVETGGKDQDGRGDRLVLHRHLPPLVAQSGRSQLRFDVVFASWTLSELPSDTSRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGG 177          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|298713546|emb|CBJ27074.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 206.453 bits (524), Expect = 2.260e-54
Identity = 142/419 (33.89%), Postives = 210/419 (50.12%), Query Frame = 0
Query:  210 VASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLW------------------PDIPRLDGVDHSQAMQDLTKHVVE---TGGKDQAGRGDRLVLH-RHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVL--------EGGDPGTQAGTT-------GPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADP------GREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPD 585
            V  P E  AY+  R +  +++  RV+ +V   +  P F      PR+ LD G GPG++ LA   +W                   ++  +  V+ SQ+M+D  K ++E     G+ + G G  L+   R              +FD+V A+++LS LP+ ASRA AT++MW LVA  GG LV+VEDGS +GS  VRS R +VL        +GGD G Q G          P  R   +GPC+HD+ CPL   E+CR  Q++P       +    S  K V+FSY  ++K P   E G+ ++ G +   + ++ L    +    K   DG +       RD   +L  D        R+ W RL+R P K KGH  LD+C+P G ++R +VAK   + +PG ++AARK+Q GGLWP+ D
Sbjct:  202 VYGPSETFAYVYHRMMPAYTVLHRVMTEVT--SELPGF-----NPRTMLDFGSGPGTSALAVWDVWGAGGGSSVAQDGKETGEGSNLSEVRLVEESQSMKDACKIMLEPLTNTGRIRTGFGTSLLEEARTAGRGGPGGAPGGRKFDLVVAAYSLSHLPTHASRAAATAVMWSLVAP-GGVLVLVEDGSAKGSHTVRSARHMVLRPPAPSPEQGGDTGKQQGNRRGKRNERQPPPRPYVIGPCRHDKECPLQAGEFCRLQQKVPW----NAVNVTSSAVKSVSFSYVSIRKGPPEREAGQDERVGSRTSSSSVDLLKA--FVQQKKNLNDGGSL------RDAMDSLGTDGISDAILRRDDWARLVRKPLKAKGHALLDVCSPEGNIQRKVVAKGKWKGVPGMFVAARKSQVGGLWPYLD 600          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|831761218|ref|XP_012750189.1| (hypothetical protein SAMD00019534_100960 [Acytostelium subglobosum LB1] >gi|735850821|dbj|GAM26921.1| hypothetical protein SAMD00019534_100960 [Acytostelium subglobosum LB1])

HSP 1 Score: 150.599 bits (379), Expect = 1.436e-34
Identity = 110/367 (29.97%), Postives = 174/367 (47.41%), Query Frame = 0
Query:  215 EALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLW-PDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSG--YKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWG 578
            EALAY++ R    ++   RV  ++A   R P F     +P + LD G GPG+ + +A  +W   +  +  V+ S  M D++K ++E  G     +  + ++    PP L++S +S    D+V AS+ LSELP   +R    + +W  V   G  LV+VE G+P G  L+R++R+++L+   P  Q  T     RA+ V PC H   CP+    WC FSQR+      +    P S   ++D  +SY ++ KL  +    +  K+   +G+  L+                                    P +  W RL   P K+KGHV +D+CTPAG+L+RV +AK   + L   Y  AR+  W 
Sbjct:  497 EALAYIAHRMPGVYACTHRVFSEIA--TRLPNF-----KPTTLLDYGSGPGTVIWSARQVWGESLKSIRAVEPSTFMSDISKKMLE--GNTNEIKWSQFLMQ---PPHLSESMQS----DLVVASYVLSELPDQETREKVINDLWRNVKPTG-MLVLVEPGTPIGFSLIRAMRQMLLDL--PADQV-TPQKSYRAQVVAPCPHSGRCPMGFNSWCHFSQRVARPVFQKLAKGPKSTVPFEDEKYSYIVMSKLIDSTIPNQMTKQVEMYGEEELK------------------------------------PNK-LWSRLNEAPFKRKGHVTMDVCTPAGDLKRVTIAKSHGKQL---YKEARRTFWS 803          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|330842754|ref|XP_003293336.1| (hypothetical protein DICPUDRAFT_90205 [Dictyostelium purpureum] >gi|325076334|gb|EGC30128.1| hypothetical protein DICPUDRAFT_90205 [Dictyostelium purpureum])

HSP 1 Score: 150.214 bits (378), Expect = 2.215e-34
Identity = 111/376 (29.52%), Postives = 174/376 (46.28%), Query Frame = 0
Query:  215 EALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPD-IPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRH--LPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSG--YKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPD 585
            EA+AY+S R    ++   RV  ++    R P F      P + LD G GPG+ L +A T+W + + R+  V+ S  M ++ K ++E G  +     + L   +H      L +S  ++L    V AS+ LSELP   SR      +W  V    G LV++E G+P G  +++ +R+++L   D G +  T     +A+ V PC H   CPL    WC FSQR+      +    PGS   ++D  +SY +L K+  +    + +K+   +G+  L+ +                    +P                 W RLI  P K+ GHV LD+C+P GE+ RV VAK   R +   Y  ARK+ W   +  P+
Sbjct:  488 EAMAYISHRMPGVYACTHRVFSEIK--TRVPNF-----NPTTLLDYGSGPGTVLWSASTMWGEHLKRIRAVEPSPFMIEIAKKLME-GNTNHIKWTNYLNTEQHERRDGSLPESEMNEL----VTASYVLSELPDQLSRFTLVKDLWRNVKP-SGMLVIIEPGTPIGFGIIKEIRQMLL---DEGEEQLTIHKSTKAQVVAPCPHSGKCPLGFNSWCHFSQRVERPNFQKLAKGPGSTMPFEDEKYSYIVLSKVVKSNIPNQLEKQLNIYGEEELKEV--------------------KP-----------------WSRLIEAPLKRGGHVILDVCSPHGEINRVTVAKSHGREI---YKEARKSFWSDAFILPE 807          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|1160568555|ref|XP_020427837.1| (hypothetical protein PPL_10756 [Polysphondylium pallidum PN500] >gi|281201494|gb|EFA75703.1| hypothetical protein PPL_10756 [Polysphondylium pallidum PN500])

HSP 1 Score: 149.828 bits (377), Expect = 2.688e-34
Identity = 114/367 (31.06%), Postives = 183/367 (49.86%), Query Frame = 0
Query:  215 EALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGK-PGS--GYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWG 578
            +ALAY++ R    ++   RV ++VA   R P F     +P + LD G GPG+ + +A   WP +  +  ++ S  M D  K ++E       G  + +V  + + P   Q+ +S    D+V AS+ LSELP +A+R    + +W+ V +  G LV+VE G+P G  L+RS+R+L+L   D   +  T   Q  A+ + PC H   CP+    WC FSQR+ +  L +++ K P S   ++D  +SY ++ K+             R     +LE  H + YG+    EE+      +PK              + W R+   P K+ GHV +D+C+P G+L+RV +AK   + L   Y  ARK+ W 
Sbjct:  513 QALAYIAHRMPGVYACTHRVFQEVA--TRLPNF-----KPETMLDYGSGPGTVIWSARETWPSLKSIRAIEPSGFMIDTAKKMLE-------GSTNGIVWSQLVSPPTTQAYQS----DIVVASYVLSELPDEATREKVVTELWKNV-KPSGILVLVEPGTPIGFSLIRSMRQLLL---DLPAEPVTIHKQNYAQVLSPCPHSGRCPMGHNSWCHFSQRV-VRPLFQKLAKGPRSTVSFEDEKYSYIVMSKMV------------RSTIPNQLEKQHEI-YGE----EEE------QPK--------------KLWSRINAPPFKRGGHVTMDVCSPEGDLKRVTIAKSHGKQL---YKEARKSFWS 816          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|635371898|emb|CCI39860.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 142.124 bits (357), Expect = 1.453e-33
Identity = 126/458 (27.51%), Postives = 187/458 (40.83%), Query Frame = 0
Query:  137 KLKDGGLQEEEDAGGESGESIDKGTKNKSHGPKYVKEEKTTIEGHDAEEERQMIEGESEKP-GYTIRK----PAWTGRVASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPD-IPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPI------GRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWP 582
             L   GL E  +   E    +   TK +SH      E+       D E  R+      E P G+T  +    PA++     P E LAYL+     +++    V R +              RP S +D G GPG+A  AA   + + I +   V+ SQAM D  + V+E              + R L  L ++   + +++D +  ++ LSE+ +D  R    S++WEL++E+ G+LV+V+ GSP GS  VRS R+ +L+  +              + V PC H+  CP  +  WC F QR P+      G   R   + GS      FSY ++K+ PG  +    D                                                P +    R+IR P   K +V LDLCTP G +ER  V K    ++   Y AARKA WG  WP
Sbjct:    7 NLSKNGLTERLEMPMELVRRLSTLTKQRSHSQL---EDLNLNYIRDGENARKFPRDTHETPVGWTTSQVAQIPAYS---YGPSETLAYLAYEIDASYATIYNVFRQLRNK-------DQHFRPTSMIDFGSGPGTASWAAREFFDESIQKHQIVETSQAMTDAAQVVMEGFNG--------FSIRRSLDELRSEVLLN-IKYDFIVLNYVLSEITTDFERVKIMSVLWELLSED-GYLVIVDRGSPWGSHQVRSARQFILDSVNSTADFS-------VQVVAPCPHNEQCPARKGTWCHFVQRSPVVIRPRDGTARRWHNQKGS-----KFSYAVMKRSPGLCKSETEDS-----------------------------------------------PSKASLARMIRAPLLAKRNVILDLCTPQGIIERRTVTKGT--SMREVYRAARKAHWGAEWP 380          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|635371897|emb|CCI39859.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 142.51 bits (358), Expect = 2.980e-33
Identity = 126/458 (27.51%), Postives = 187/458 (40.83%), Query Frame = 0
Query:  137 KLKDGGLQEEEDAGGESGESIDKGTKNKSHGPKYVKEEKTTIEGHDAEEERQMIEGESEKP-GYTIRK----PAWTGRVASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWPD-IPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLEGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPI------GRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWP 582
             L   GL E  +   E    +   TK +SH      E+       D E  R+      E P G+T  +    PA++     P E LAYL+     +++    V R +              RP S +D G GPG+A  AA   + + I +   V+ SQAM D  + V+E              + R L  L ++   + +++D +  ++ LSE+ +D  R    S++WEL++E+ G+LV+V+ GSP GS  VRS R+ +L+  +              + V PC H+  CP  +  WC F QR P+      G   R   + GS      FSY ++K+ PG  +    D                                                P +    R+IR P   K +V LDLCTP G +ER  V K    ++   Y AARKA WG  WP
Sbjct:   73 NLSKNGLTERLEMPMELVRRLSTLTKQRSHSQL---EDLNLNYIRDGENARKFPRDTHETPVGWTTSQVAQIPAYS---YGPSETLAYLAYEIDASYATIYNVFRQLRNK-------DQHFRPTSMIDFGSGPGTASWAAREFFDESIQKHQIVETSQAMTDAAQVVMEGFNG--------FSIRRSLDELRSEVLLN-IKYDFIVLNYVLSEITTDFERVKIMSVLWELLSED-GYLVIVDRGSPWGSHQVRSARQFILDSVNSTADFS-------VQVVAPCPHNEQCPARKGTWCHFVQRSPVVIRPRDGTARRWHNQKGS-----KFSYAVMKRSPGLCKSETED-----------------------------------------------SPSKASLARMIRAPLLAKRNVILDLCTPQGIIERRTVTKGT--SMREVYRAARKAHWGAEWP 446          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|1130851185|dbj|GAV68691.1| (Rsm22 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 135.961 bits (341), Expect = 1.455e-30
Identity = 124/417 (29.74%), Postives = 188/417 (45.08%), Query Frame = 0
Query:  215 EALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLWP-DIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRH--LPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVL----------EGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPR-EEWCRFSQRI---PIGRLHRRI-GKPGSGYKDVAFSYTILKK-------LPGTGEDGEGDKE---GRKWGDARL--EALHRLRYGDSGK--GEEDGAAY-------PYRPKDR---DWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPA------GELERVMVAKRATRALPGKYMAARKAQWGGLWPF 583
            + +AY+++R    FS   R+L +V    R P F      P   LD G G GSA  A   +WP  I +L+ V+ SQ+MQ   + +++       G  D  ++H +  L  L  +   S+   D+V AS+ L E+PS   R      +W+L  +    LV+VE G+P GS ++  +R  +L          +  +             A  V PC HD  CPL + E++C F QR+      R+++R   +P  GY+D  FS+ + ++        P  G   E  KE    RK  D  +  E L +++  D      EED A Y       P+    +   D E   +AD G  GWGR+I  P ++  H  +++C         G  ERV+V K     L   +  ARK+ WG LWPF
Sbjct:  111 QTIAYVASRMPAVFSACHRILSEVC--RRLPGFV-----PAKVLDFGAGTGSAFWALREVWPGSIEKLNLVEPSQSMQRAGRTLIQ-------GLKDLPLIHSYSSLQALSKEINNSEREHDLVIASYVLGEIPSLKDRITIVRQLWDLTRD---VLVLVEPGTPHGSDIISLMRSHILWMEKRKCRKSQEENKEASKDIVAHNTGAFIVAPCPHDGRCPLEKSEKYCHFVQRLQRTTSQRIYKRSKDQPLRGYEDEKFSFVVFRRGQRPREPWPRDGMKFETLKEQNAKRKPVDVEIDYEDLLKMQQADDNTPYQEEDPAYYDSDFDTDPFDNNVKDGGDEEETSRADLG-SGWGRIIFAPVRRGRHTEVNVCRSTERDGSEGSFERVIVTKSKNHVL---HHQARKSMWGDLWPF 506          
BLAST of EWM29591.1 vs. NCBI_GenBank
Match: gi|301115488|ref|XP_002905473.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110262|gb|EEY68314.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 131.339 bits (329), Expect = 2.429e-29
Identity = 118/375 (31.47%), Postives = 167/375 (44.53%), Query Frame = 0
Query:  213 PPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLW-PDIPRLDGVDHSQAMQDLTKHVVETGGKDQAGRGDRLVLHRHLPPLLAQSGRSQLRFDVVFASWTLSELPSDASRALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVLE--GGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRI-GKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDGAAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAK-RATRALPGKYMAARKAQWGGLWP 582
            P E LA+L+      ++    V  ++    R P F     +P+S LD G GPG+A   A   +   + +   V+ SQ+M D  + V+E G    + R +   L R +      +G    ++D+V  S+  S++ +D  R   TS +WEL++E+G  LV+V+ GSP GS  VRS R+ VL+    D   + G        R V PC H   CP+    WC F QR P+    R +  K   G K   FSY I++K                            R G     EED AA   +P                   RL+ +P     HVHLDLCTP G+ ER  V + +A R +   Y A+RKA WG LWP
Sbjct:  143 PAETLAFLAYEMEATYACTHAVFTELQ--KRLPDF-----KPKSVLDFGSGPGTASWVAKDFYDQSLDKYRVVEPSQSMVDAAEVVLE-GFPGLSMRRNITDLSRDI-----DAGN---KYDLVVVSYVFSDITNDFERVATTSALWELLSEDGC-LVIVDRGSPWGSHHVRSARQFVLDLVAKDANGKEGV-------RIVAPCPHHDECPVGGNTWCHFVQRSPVVNRPREVTTKRWHGQKGSKFSYMIMQK---------------------------TRKG----SEEDAAAKKKKPI-----------------ARLLLDPLLATRHVHLDLCTPEGKHERRSVTRGKAVREV---YRASRKAHWGALWP 442          
The following BLAST results are available for this feature:
BLAST of EWM29591.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112162|gb|EWM29591.1|0.000e+0100.00mitochondrial chloroplast ribosome small subunit c... [more]
gi|553183905|ref|XP_005853989.1|2.148e-11397.18methyltransferase-like protein, partial [Nannochlo... [more]
gi|298713546|emb|CBJ27074.1|2.260e-5433.89conserved unknown protein [Ectocarpus siliculosus][more]
gi|831761218|ref|XP_012750189.1|1.436e-3429.97hypothetical protein SAMD00019534_100960 [Acytoste... [more]
gi|330842754|ref|XP_003293336.1|2.215e-3429.52hypothetical protein DICPUDRAFT_90205 [Dictyosteli... [more]
gi|1160568555|ref|XP_020427837.1|2.688e-3431.06hypothetical protein PPL_10756 [Polysphondylium pa... [more]
gi|635371898|emb|CCI39860.1|1.453e-3327.51unnamed protein product [Albugo candida][more]
gi|635371897|emb|CCI39859.1|2.980e-3327.51unnamed protein product [Albugo candida][more]
gi|1130851185|dbj|GAV68691.1|1.455e-3029.74Rsm22 domain-containing protein [Cephalotus follic... [more]
gi|301115488|ref|XP_002905473.1|2.429e-2931.47conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1091rna1091Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications