EWM29568.1, cds1084 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|585112139|gb|EWM29568.1| (Choline transporter [Nannochloropsis gaditana]) HSP 1 Score: 1420.6 bits (3676), Expect = 0.000e+0 Identity = 713/713 (100.00%), Postives = 713/713 (100.00%), Query Frame = 0 Query: 1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATAVERAVANFGGGSSLLFGRGGGSVSRTPTLDVGEEEQEEEGEGGGEGGREGGREGEGEGGMETGMHGEEDVEEV 713 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATAVERAVANFGGGSSLLFGRGGGSVSRTPTLDVGEEEQEEEGEGGGEGGREGGREGEGEGGMETGMHGEEDVEEV Sbjct: 1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATAVERAVANFGGGSSLLFGRGGGSVSRTPTLDVGEEEQEEEGEGGGEGGREGGREGEGEGGMETGMHGEEDVEEV 713
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|553191210|ref|XP_005855337.1| (hypothetical protein NGA_0093200 [Nannochloropsis gaditana CCMP526] >gi|422293712|gb|EKU21012.1| hypothetical protein NGA_0093200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0 Identity = 640/642 (99.69%), Postives = 640/642 (99.69%), Query Frame = 0 Query: 1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATAVE 642 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATA Sbjct: 1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLEGDRPSPSSQAPSSSAVGPGMVPPYPSSASVNPAGKGKRASPPPAPATAAR 642
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|553192695|ref|XP_005855625.1| (hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526] >gi|422293431|gb|EKU20731.1| hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 221.09 bits (562), Expect = 3.520e-59 Identity = 144/435 (33.10%), Postives = 230/435 (52.87%), Query Frame = 0 Query: 134 SALWLQVMVTCSSALLTYTLMAV-------ALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGP 561 SALW +++ ++ ++T L+ +L L+ G A ++ L+ I ++++ +R R+ FA+ NLK + A P +L + + ++Q+ W +LW LA G A + + G + +SQCT +T G AC + +T V +S V +D S F+ + + +L WG VV+NV C+ +G V WW SG+ +G V F R+ STSFGSIC GSL++A+++ R +L R QR N +T ++ CL+ +++R + FNRYA+VY A YG F +G T ELF+ G+TA++ND + E L+L +I+ LL A+ G++YG +G+ IL V G F G ++ +V ++++ V T FV+FAEDPQ+ SH EEL QAW + P Sbjct: 225 SALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMA-------IMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVV--IEGTSFLLSQCT--DTAG-------ACACSRETAEGVV---ALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGV--VSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQR---ENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPA-LYEELAQAWAKIGYDP 632
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|585101254|gb|EWM21181.1| (Choline transporter [Nannochloropsis gaditana]) HSP 1 Score: 220.32 bits (560), Expect = 1.631e-58 Identity = 144/435 (33.10%), Postives = 230/435 (52.87%), Query Frame = 0 Query: 134 SALWLQVMVTCSSALLTYTLMAV-------ALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGP 561 SALW +++ ++ ++T L+ +L L+ G A ++ L+ I ++++ +R R+ FA+ NLK + A P +L + + ++Q+ W +LW LA G A + + G + +SQCT +T G AC + +T V +S V +D S F+ + + +L WG VV+NV C+ +G V WW SG+ +G V F R+ STSFGSIC GSL++A+++ R +L R QR N +T ++ CL+ +++R + FNRYA+VY A YG F +G T ELF+ G+TA++ND + E L+L +I+ LL A+ G++YG +G+ IL V G F G ++ +V ++++ V T FV+FAEDPQ+ SH EEL QAW + P Sbjct: 288 SALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMA-------IMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVV--IEGTSFLLSQCT--DTAG-------ACACSRETAEGVV---ALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGV--VSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQR---ENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPA-LYEELAQAWAKIGYDP 695
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|553181489|ref|XP_005853576.1| (hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526] >gi|422295487|gb|EKU22786.1| hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 213.772 bits (543), Expect = 1.227e-57 Identity = 142/431 (32.95%), Postives = 231/431 (53.60%), Query Frame = 0 Query: 134 SALWLQVMVTCSSALLTYTLMAVAL---LGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGP 561 SALW +++ ++ ++T L+ + +G++ + N ++ L+ I ++++ +R R+ FA+ NLK + A P +L + + ++Q+ W +LW LA G A + + G + +SQCT +T G AC + +T V +S V +D S F+ + + +L WG VV+NV C+ +G V WW SG+ +G V F R+ STSFGSIC GSL++A+++ R +L R QR N +T ++ CL+ +++R + FNRYA+VY A YG F +G T ELF+ G+TA++ND + E L+L +I+ LL A+ G++YG +G+ IL V G F G ++ +V ++++ V T FV+FAEDPQ+ SH EEL QAW + P Sbjct: 93 SALWTGILLRNAAHIITAALIGSIISSGVGVILALVY---GNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIV--VIEGTSFLLSQCT--DTAG-------ACACSRETAEGVV---ALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGV--VSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQR---ENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPA-LYEELAQAWAKIGYDP 500
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|698806066|ref|XP_009836062.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574108899|gb|ETV74404.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 207.223 bits (526), Expect = 2.231e-55 Identity = 151/476 (31.72%), Postives = 231/476 (48.53%), Query Frame = 0 Query: 98 TSSVDDPAHPGTRH---ATYEGFKLFSGLA--LICTLGVVLSALWLQVMVTCSSALLTYTL-MAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVL--LNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGR----DWGI-----SQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWED 556 TS +D H + H A ++ F + G++ LI VV SALW+QV++ C+ ++ + L M V ++ A + F NP+ G+ LL I + Y ++ R+AFA+A+LK+AC AL + + + + + +QV W + W+L+ +G L DP C E+ G +CG VT++ LL WG V++NV CTV+GTV TWW + R A V RSL++SFGSIC GSL+VA++Q R ++ + A V + + C+L ++ + +FN +A YV +YG DF SAGKA +LF +RG TA++ND + LS+G VG+L + G + + DW + I G G G +A +++ LV +A+ T FV FAEDP S + SH E EL+ W Sbjct: 65 TSGLDYLKHFESEHPSQAAHKSFTMVLGVSGGLI-GFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFV--NPFMGLFFLLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVY---QLFRSADP---------SCEQEESRGE------------------LCGGAGFNVTIF----------------FLLVSVYWGQQVIQNVMTCTVAGTVATWWYNARTESA--VAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNVGLACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRSAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTGVIGLVVAKFAPVDWTVGFGADDTTRYVIFGGLGFIAGFSMAMILANLVITALHTIFVCFAEDPVSFQRSH-PEHYNELILTWRH 488
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|673045667|ref|XP_008876794.1| (hypothetical protein H310_11800 [Aphanomyces invadans] >gi|574467456|gb|ETV94479.1| hypothetical protein H310_11800 [Aphanomyces invadans]) HSP 1 Score: 204.142 bits (518), Expect = 2.948e-54 Identity = 151/476 (31.72%), Postives = 230/476 (48.32%), Query Frame = 0 Query: 98 TSSVDDPAHPGTRH---ATYEGFKLFSGLA-LICTLGVVLSALWLQVMVTCSSALLTYTL-MAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCG-SGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVL--LNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGR----DW-----GISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWED 556 TS +D H H A + F + G++ + L VV SALW+QV++ C+ ++ + L M V L+ A + F NP+ G+ LL I + Y ++ R+AFA+A+LK+AC AL + + + +L+QV W I W+++ +G L + DP C E+ G +CG +G + + LL WG V++NV CTV+GTV TWW + A V RSL++SFGSIC GSL+VA++Q R ++ + A + + C+L ++ + +FN +A YV +YG DF +AGKA +LF +RG TA++ND + LS+G VG+L + G + + DW G I GV G GV +A +++ LV +A+ T FV FAEDP S + SH E EL+ W Sbjct: 67 TSGLDYLKHFEEEHPSQAAQKSFTMVLGVSGSLIGLSVVFSALWIQVLMACAENMIRFALWMNVGLMFGFAIMSLFV--NPFVGLFFLLGAAINICYINAVQNRIAFASAHLKLACVALSKHKSIFVLALFFILVQVAWLITWSVSAVGVY---QLFRVADP---------NCEKEESHGT------------------LCGGTGFNVA-----------------IFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNTHTDRA--VAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNAALACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRTAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTCVVGLVVAKFAPADWVAGFGGDDTTRYVIFGVLGFIAGVSMAMILANLVITALHTIFVCFAEDPVSFQRSH-PEHYNELILTWRH 490
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|698781887|ref|XP_009823987.1| (hypothetical protein H257_02163 [Aphanomyces astaci] >gi|574121711|gb|ETV87188.1| hypothetical protein H257_02163 [Aphanomyces astaci]) HSP 1 Score: 197.208 bits (500), Expect = 1.632e-51 Identity = 153/492 (31.10%), Postives = 240/492 (48.78%), Query Frame = 0 Query: 131 VVLSALWLQVMVTCSSALLTYTLMAVALLGLLA----GTAFFA--GANPWAGVVTLLVTVIALV---YFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQC---TTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRE-RGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLV---DRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGIS---QANVAI-----------LGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDVLQGPLSGMGGMVGGAEGGRGQGGFKPPVPSPSPLE 592 VVLS +W +M+ LL + VA++G+ A G+ F G N + V L T++AL+ Y +RRR+AFA+ NLKIACRA+ P LL + G+ ++ W ++W+ A + + Y +SQ L P+G G T +R + ++ G L+V F W VVRN+ H TVSGTV +WW + E R + + R+++ SFGSIC GS +V++++T + +++ ++ Q++ +LGCL ++ R + +FN+YA YV +YG F+ +GK T ELF G +A+ ND++I+ VL +G ++VG A G +W +S N ++ LG SG IG + +V ++ S+V T FVLFAEDPQSL+ SH + +L AW+++ P+ QGG PP S P + Sbjct: 89 VVLSMVWTGIMLVMGK-LLIWIAAIVAIVGVFAAGVLGSYFMKDGGDNTFFWVPATLGTLLALILTIYVCCIRRRIAFASVNLKIACRAVLTYPVLLLIAFGMTIVIALWCLVWSAATYATMNHGE------------YILSQVPGLNVSANLNPDG--------YGNT-----------------ER----FSIFFGMLLV----FFWTVFVVRNIVHVTVSGTVASWWYNSDENRKPMTSTTALCRAMTLSFGSICFGSFIVSVIETIKAIIMFFRHLASKS-QNSVAVCLLGCLECIIGCISRLVQYFNKYAYSYVGIYGFSFLRSGKETWELFDKMGWSAIANDSLIDNVLMVGAIMVGFTGAAAG-----NWAVSYDKHHNNSVWTQNLSQPALTLGTSGFLIGFAICYIVMSVINSSVATAFVLFAEDPQSLQRSHPDDH-NDLHAAWKEIY--PVE--------YAASSNQGG-APPAGSSKPTQ 516
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|698806064|ref|XP_009836061.1| (hypothetical protein H257_10993 [Aphanomyces astaci] >gi|574108898|gb|ETV74403.1| hypothetical protein H257_10993 [Aphanomyces astaci]) HSP 1 Score: 196.052 bits (497), Expect = 3.529e-51 Identity = 152/492 (30.89%), Postives = 231/492 (46.95%), Query Frame = 0 Query: 98 TSSVDDPAHPGTRH---ATYEGFKLFSGLA--LICTLGVVLSALWLQVMVTCSSALLTYTL-MAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRR----------------RMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVL--LNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGR----DWGI-----SQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWED 556 TS +D H + H A ++ F + G++ LI VV SALW+QV++ C+ ++ + L M V ++ A + F NP+ G+ LL I + Y + R R+AFA+A+LK+AC AL + + + + + +QV W + W+L+ +G L DP C E+ G +CG VT++ LL WG V++NV CTV+GTV TWW + R A V RSL++SFGSIC GSL+VA++Q R ++ + A V + + C+L ++ + +FN +A YV +YG DF SAGKA +LF +RG TA++ND + LS+G VG+L + G + + DW + I G G G +A +++ LV +A+ T FV FAEDP S + SH E EL+ W Sbjct: 65 TSGLDYLKHFESEHPSQAAHKSFTMVLGVSGGLI-GFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFV--NPFMGLFFLLGAAINIWYCRPCRHVSSHVSWTSYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVY---QLFRSADP---------SCEQEESRGE------------------LCGGAGFNVTIF----------------FLLVSVYWGQQVIQNVMTCTVAGTVATWWYNARTESA--VAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNVGLACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRSAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTGVIGLVVAKFAPVDWTVGFGADDTTRYVIFGGLGFIAGFSMAMILANLVITALHTIFVCFAEDPVSFQRSH-PEHYNELILTWRH 504
BLAST of EWM29568.1 vs. NCBI_GenBank
Match: gi|673023364|ref|XP_008865643.1| (hypothetical protein H310_03524 [Aphanomyces invadans] >gi|574478871|gb|ETW05866.1| hypothetical protein H310_03524 [Aphanomyces invadans]) HSP 1 Score: 194.512 bits (493), Expect = 1.348e-50 Identity = 145/454 (31.94%), Postives = 226/454 (49.78%), Query Frame = 0 Query: 131 VVLSALWLQVMVTCSSALLTYTLMAVALLGLLA----GTAFFA--GANPWAGV-VTL--LVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRE-RGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLV---DRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGIS---QANVAI-----------LGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHGGEACEELVQAWEDV 557 VVLS +W VM+ LL + VA++G+ A G+ F G + + V TL L+ VI +Y +RRR+AFA+ NLKIACRA+ P LL + G+ ++ W ++W++A + + + P + L P+G T L ++ G L+V F W VVRN+ H TVSGTV +WW + E R + + R+++ SFGSIC GS +V++++T + +++ ++ Q+ +LGCL ++ R + +FN+YA YV +YG F+ +GK T ELF G +A+ ND++I+ VL +G V+VG A G +W +S N ++ LG SG IG + +V ++ S+V T FVLFAEDPQSL+ SH E +L AW+++ Sbjct: 89 VVLSMIWTGVMLVMGK-LLIWIAAIVAIVGVFAAGILGSYFMKDGGDDTFFWVPATLGTLLAVILTIYVCCIRRRIAFASVNLKIACRAVLTYPVLLLIAFGMTIVIAIWCLVWSVATYATMNHGEYILSKVP---------ELNASAHLNPDGYGTTQRL-----------------------------SIFFGMLLV----FFWTVFVVRNIVHVTVSGTVASWWYNSDENRKPMTSTTALCRAMTLSFGSICFGSFIVSVIETIKAIVMFFRHLASKS-QNAVAVCLLGCLECIIGCISRLVQYFNKYAYSYVGIYGFSFLRSGKETWELFDKMGWSAIANDSLIDNVLMVGAVMVGFTGAAAG-----NWAVSYDKHHNSSMWTQNLSHPALTLGTSGFLIGFAICYIVMSVINSSVATAFVLFAEDPQSLQRSH-PEDHNDLHAAWKEI 492 The following BLAST results are available for this feature:
BLAST of EWM29568.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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