EWM29512.1, cds1082 (CDS) Nannochloropsis gaditana

Overview
NameEWM29512.1
Unique Namecds1082
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1149406..1149458 -
Alignment locationCM002456.1:1149280..1149310 -
Alignment locationCM002456.1:1148921..1149056 -
Alignment locationCM002456.1:1148536..1148708 -
Alignment locationCM002456.1:1148330..1148452 -

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Properties
Property NameValue
Protein idEWM29512.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g83.8601.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1149406..1149458 -
CM002456.1supercontigCM002456.1:1149280..1149310 -
CM002456.1supercontigCM002456.1:1148921..1149056 -
CM002456.1supercontigCM002456.1:1148536..1148708 -
CM002456.1supercontigCM002456.1:1148330..1148452 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29512.1 vs. NCBI_GenBank
Match: gi|585112083|gb|EWM29512.1| (hypothetical protein Naga_100006g83 [Nannochloropsis gaditana])

HSP 1 Score: 354.369 bits (908), Expect = 8.294e-124
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MGIMQGILEEPSKVGRSVSSEVGKAHKNSEQDSVVGSTRMKDSGRKRLRCGYEDARRFHIPCFYITSHLGDPYAVTGIYRLHGHLHLGEIWAFFKALDKSKDSMRGPGQHEPHTKLLLRRYRHVPRTGTAEWEHSTAFVLSFVADGYTSRRRIYWLTRTFPIRWERIRRFP 171
            MGIMQGILEEPSKVGRSVSSEVGKAHKNSEQDSVVGSTRMKDSGRKRLRCGYEDARRFHIPCFYITSHLGDPYAVTGIYRLHGHLHLGEIWAFFKALDKSKDSMRGPGQHEPHTKLLLRRYRHVPRTGTAEWEHSTAFVLSFVADGYTSRRRIYWLTRTFPIRWERIRRFP
Sbjct:    1 MGIMQGILEEPSKVGRSVSSEVGKAHKNSEQDSVVGSTRMKDSGRKRLRCGYEDARRFHIPCFYITSHLGDPYAVTGIYRLHGHLHLGEIWAFFKALDKSKDSMRGPGQHEPHTKLLLRRYRHVPRTGTAEWEHSTAFVLSFVADGYTSRRRIYWLTRTFPIRWERIRRFP 171
The following BLAST results are available for this feature:
BLAST of EWM29512.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112083|gb|EWM29512.1|8.294e-124100.00hypothetical protein Naga_100006g83 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1083rna1083Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications