EWM29597.1, cds1081 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29597.1 vs. NCBI_GenBank
Match: gi|585112168|gb|EWM29597.1| (Sulfotransferase [Nannochloropsis gaditana]) HSP 1 Score: 930.628 bits (2404), Expect = 0.000e+0 Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query: 1 MVCSRSTQVISIVLGASCICWYSIITGSGTSRGENFLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRLQDTVANVCREHKKWYSDHGFSTVFTYWGDNGQAPRCCDFVVRREIHRWQNEGRNHAIQVGGTAGASSNSSGGDVSSAYKADAFAMPKKTLLRSEQH 444
MVCSRSTQVISIVLGASCICWYSIITGSGTSRGENFLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRLQDTVANVCREHKKWYSDHGFSTVFTYWGDNGQAPRCCDFVVRREIHRWQNEGRNHAIQVGGTAGASSNSSGGDVSSAYKADAFAMPKKTLLRSEQH
Sbjct: 1 MVCSRSTQVISIVLGASCICWYSIITGSGTSRGENFLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRLQDTVANVCREHKKWYSDHGFSTVFTYWGDNGQAPRCCDFVVRREIHRWQNEGRNHAIQVGGTAGASSNSSGGDVSSAYKADAFAMPKKTLLRSEQH 444
BLAST of EWM29597.1 vs. NCBI_GenBank
Match: gi|553191227|ref|XP_005855341.1| (hypothetical protein NGA_0093800 [Nannochloropsis gaditana CCMP526] >gi|422293716|gb|EKU21016.1| hypothetical protein NGA_0093800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0 Identity = 345/349 (98.85%), Postives = 347/349 (99.43%), Query Frame = 0
Query: 1 MVCSRSTQVISIVLGASCICWYSIITGSGTSRGENFLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRLQ 349
MVCSRSTQVISIVLGASCICWYSIITGSGTSRGE FLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALN+LIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNR +
Sbjct: 1 MVCSRSTQVISIVLGASCICWYSIITGSGTSRGEIFLFKAVTMTAKDLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNDLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRTK 349
BLAST of EWM29597.1 vs. NCBI_GenBank
Match: gi|585102714|gb|EWM22256.1| (hypothetical protein Naga_100195g15 [Nannochloropsis gaditana]) HSP 1 Score: 453.366 bits (1165), Expect = 2.827e-153 Identity = 241/469 (51.39%), Postives = 304/469 (64.82%), Query Frame = 0
Query: 2 VCSRSTQVISIVLGASCIC-WYSIITGSGTSRGENFLFKAVTMTAK-----------------------------DLSASDVTDCGNASGIGSSSIDARTASGINMTNLACPAFDDRPSRFPSNFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVKEVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEPNSQLAVIRGNATDIKSAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPGAAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGINEKCGGEAYMASTLAAFNRLQDTVANVCREHKKWYSDHGFSTVFTYWGDNGQAPRCCDFVVRREIHRWQNEGRNHAIQVGGTAGASSNS--SGGDVSSAYKADAFAMPKKTL 438
V SRS +I I+L A WY + S + N LF+A ++ + ++ AS+ + + +G +IDAR M+ LAC A+DDRPS+FPSNFWYVK+ KT+SSTLAGVFRSVAAH V MLN + M V++++ KQKVISA+ S E PRLGL+NH+ N+ L+ +GPLLLFTSVREP+ F+S F+ +C+NS+ KNVDC+G VD+K+ MATTMEPN QL IRG+A D++SA AQY IFVRER +ESLVVFMILYGLDFADIVHLSSKVRT YP + KMP LN L+ SQED +L+ ANALLD+KIA IN+ C GEAY AS LA F+RLQ TV C ++ +WY +HGFSTV TYW DNG APRC DFVVRRE+ WQ E + AI+V ++ S S + S A + D + MPKK L
Sbjct: 29 VFSRSRVLIGILLAAFGFSSWYFRNSSSMELQSGNILFRAPGISGEYRRNTHPSLHTPSTSENMDRHIVFKSSRNEVVASNSIGSADDADVGIDNIDARQVPMRRMSPLACTAYDDRPSQFPSNFWYVKSHKTASSTLAGVFRSVAAHRGVTMLNAEEVRMDVEQLKSAKQKVISAMNSVFGEVPRLGLANHMPLNTESYALLKSDGPLLLFTSVREPVGYFHSIFLHKCRNSEMKKNVDCYGAVVDKKVAMATTMEPNPQLNYIRGDAVDVESAAAQYGLIFVRERLEESLVVFMILYGLDFADIVHLSSKVRTDMYPDSEKMPVELNELVERKSQEDARLYARANALLDDKIATINKNCKGEAYFASMLAVFSRLQATVVAECEKYNRWYEEHGFSTVLTYWNDNGVAPRCRDFVVRREMRAWQEEDKAIAIRVAVAEALAAESARSSSEGSGASELDGWGMPKKLL 497
BLAST of EWM29597.1 vs. NCBI_GenBank
Match: gi|612392912|ref|XP_007511976.1| (unknown protein [Bathycoccus prasinos] >gi|424513442|emb|CCO66064.1| unknown protein [Bathycoccus prasinos]) HSP 1 Score: 67.781 bits (164), Expect = 1.423e-8 Identity = 72/261 (27.59%), Postives = 110/261 (42.15%), Query Frame = 0
Query: 95 NFWYVKNPKTSSSTLAGVFRSVAAHHAVIMLNPAKTHMSVK---EVEDTKQKVISAVQSRHSEPPRLGLSNHVRFNSGIRDTLELNGPLLLFTSVREPIDRFYSFFIEQCQNSKFGKNVDCFGEAVDEKLQMATTMEP-NSQLAVIRGNATDIK-------------------SAVAQYDFIFVRERFDESLVVFMILYGLDFADIVHLSSKVRTGKYPG----AAKMPPALNNLIRTNSQEDVKLWVTANALLDEKIAGI 328
N +VK KT S+T+AG+ R +A H LN A+T + E++D ++ + A +H F +L+ P L TS+R+P+ RF S F + ++K + D DE L M T E S+L T I V YD + V ERFDES++V + GL +D+++L +K + G AA + N L ++ D L AN L+ I+ I
Sbjct: 149 NILFVKTIKTGSTTIAGLCRRIANRHG---LNGARTGYNQNGSTEIDDKQEPYVYA--------------DHRMFKQTEGTLSKLDHPTFLLTSIRDPVSRFISEF-QYVMDAKESHDKDY--RVPDELLPMPVTNEEWESRLLTFLNMQTSIDHQYDYIGSQKACDNKWSPAGVVNLYDHVVVLERFDESMIVLKNMLGLSNSDLLYLRAKENDYTWGGGGLSAATLAKVKNAL---SASRDYALIDQANQRLNGHISQI 386 The following BLAST results are available for this feature:
BLAST of EWM29597.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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