EWM30569.1, cds107 (CDS) Nannochloropsis gaditana

Overview
NameEWM30569.1
Unique Namecds107
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:288220..288819 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30569.1
Productleucine carboxyl methyltransferase
Orig transcript idgnl|cribi|Naga_100033g31.8408.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:288220..288819 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0032259methylation
Vocabulary: INTERPRO
TermDefinition
IPR007213LCM_MeTrfase
IPR029063SAM-dependent_MTases
IPR011610CHP00027_methylltransferase
Homology
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|585113236|gb|EWM30569.1| (leucine carboxyl methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 410.609 bits (1054), Expect = 3.700e-145
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query:    1 MTLFQLLFNSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVNDFTLASLRAQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRATVGSKS 199
            MTLFQLLFNSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVNDFTLASLRAQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRATVGSKS
Sbjct:    1 MTLFQLLFNSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVNDFTLASLRAQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRATVGSKS 199          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|664261648|ref|WP_030793050.1| (SAM-dependent methyltransferase [Streptomyces sp. NRRL S-920])

HSP 1 Score: 111.309 bits (277), Expect = 2.306e-26
Identity = 74/194 (38.14%), Postives = 99/194 (51.03%), Query Frame = 0
Query:   10 SYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLIS-DFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVN--DFTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRAT 194
            +YRL      + +E+D   VLD+K+  L GVA       R  HR ++ D   D +W  QL +AG+DP   + W+LEG LYY PEP    ML  + A+++PGS + AD VN    TL  +R      A  G  WL  T     +EPE      GF  VE    GE GA +G W  PV PR + K+V R + +  T
Sbjct:  104 AYRLSWPDHVRYFEVDRPAVLDFKSERLQGVA------PRVAHRTVAVDLTAD-NWESQLVDAGYDPTLPSTWLLEGLLYYIPEPDTHRMLERVAAITAPGSRIAADVVNAAALTLPHMRGLLDVFANWGCPWLFGT-----DEPEDLFDRYGF-SVEAKQPGEPGADFGRWPDPVPPR-DVKNVRRVFFVHGT 283          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|1159256430|ref|WP_079190016.1| (SAM-dependent methyltransferase [Streptomyces paucisporeus])

HSP 1 Score: 108.997 bits (271), Expect = 1.142e-25
Identity = 67/190 (35.26%), Postives = 94/190 (49.47%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVNDFTLASLRAQAGDKWLTSTFSS-------AMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YR+   +  + +E+D  PVLDYK   LAG         R+  R +        W   L  AG+ P++ + W+LEG L+Y PEP V  +L  I  LS+PGSL+ AD VN   L    A  G + L   F+          +EPE   +  GF + +V   GE GA +G W  PV PR   +DV R +L+
Sbjct:   83 RAYRMAWPEGVRYFEVDRPPVLDYKRQRLAGQP------PRADRRAVPADLASPSWPDALTGAGYRPDRPSAWLLEGLLFYLPEPAVHRVLDQIADLSAPGSLIAADLVNAAAL----AMPGQRALLDVFAGWGCPWLFGCDEPEVLFARHGF-KADVTQPGEAGADFGRWPDPVPPRDLAEDVYRVFLV 261          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|1110553607|emb|SHM96175.1| (methyltransferase, TIGR00027 family [Streptomyces paucisporeus])

HSP 1 Score: 109.383 bits (272), Expect = 1.267e-25
Identity = 67/190 (35.26%), Postives = 94/190 (49.47%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVNDFTLASLRAQAGDKWLTSTFSS-------AMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YR+   +  + +E+D  PVLDYK   LAG         R+  R +        W   L  AG+ P++ + W+LEG L+Y PEP V  +L  I  LS+PGSL+ AD VN   L    A  G + L   F+          +EPE   +  GF + +V   GE GA +G W  PV PR   +DV R +L+
Sbjct:   98 RAYRMAWPEGVRYFEVDRPPVLDYKRQRLAGQP------PRADRRAVPADLASPSWPDALTGAGYRPDRPSAWLLEGLLFYLPEPAVHRVLDQIADLSAPGSLIAADLVNAAAL----AMPGQRALLDVFAGWGCPWLFGCDEPEVLFARHGF-KADVTQPGEAGADFGRWPDPVPPRDLAEDVYRVFLV 276          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|664215100|ref|WP_030748205.1| (SAM-dependent methyltransferase [Streptomyces sp. NRRL S-31])

HSP 1 Score: 107.842 bits (268), Expect = 5.819e-25
Identity = 72/191 (37.70%), Postives = 98/191 (51.31%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVN--DFTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YRL+  ++ + +E+D   VL +K + LAGV  R        HR+  D      W  +L+EAG+DP   + W+LEG LYY PEP    +L  +  +S+PGS + AD VN    TL  +R      A  G  WL   F S  +EPE      GF  V     GE GA YG W  PV PR+E +DV R + +
Sbjct:  103 RAYRLDWPERLRWFEVDRPAVLAHKDASLAGVEPRV-----RHHRVAVDLTV-PDWPDRLREAGYDPTVPSTWLLEGLLYYIPEPDTHRILKQVAEISAPGSRIAADIVNAAALTLPGMRGLLDVFAGWGCPWL---FGS--DEPEALFDAYGF-TVRATQPGEEGADYGRWPDPVPPRSE-RDVRRVFFV 280          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|639149232|ref|WP_024491297.1| (SAM-dependent methyltransferase [Streptomyces sp. AW19M42])

HSP 1 Score: 106.686 bits (265), Expect = 1.242e-24
Identity = 71/194 (36.60%), Postives = 98/194 (50.52%), Query Frame = 0
Query:   10 SYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLIS-DFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVN--DFTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRAT 194
            +YR+      + +E+D   VL +K+  L GVA R        HR ++ D   D +W  QL +AG+DP   + W+LEG LYY PEP    ML  + A+++PGS + AD VN    +L  +R      A  G  WL  T     +EPE      GF  VE    GE GA +G W  PV PR + K+V R + +  T
Sbjct:  104 AYRMSWPDHIRYFEVDRPAVLAFKSDRLQGVAPRV------AHRSVAVDLTAD-NWESQLIDAGYDPTLPSTWLLEGLLYYIPEPDTHRMLERVAAITAPGSRIAADVVNAAALSLPHMRGLLDVFANWGCPWLFGT-----DEPEDLFDRYGF-SVEATQPGEPGADFGRWPDPVPPR-DVKNVRRVFFVHGT 283          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|1055497674|ref|WP_067156653.1| (SAM-dependent methyltransferase [Streptomyces sp. ERV7] >gi|1033217586|gb|OAR27705.1| hypothetical protein A8W25_03125 [Streptomyces sp. ERV7])

HSP 1 Score: 105.145 bits (261), Expect = 4.928e-24
Identity = 71/191 (37.17%), Postives = 95/191 (49.74%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVN--DFTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YRL+  +  + YE+D   VL YK   L GV+       R+ HR ++       W   L++AG+DP   + W+LEG LYY PE     +L  +   S+PGS + AD VN    TL  +R      A  G  WL  T     +EPE    +LGF  VE +  GE GA +G W  PV PR E  DV R + I
Sbjct:  103 RAYRLDWPEGLRYYEVDRPAVLAYKQDRLEGVS------PRTDHRTVAVDLTSPDWEDDLRKAGYDPALPSTWLLEGLLYYIPEQDTHRILRRVADFSAPGSRIAADLVNAAALTLPHMRGLLDIFAGWGCPWLFGT-----DEPEALFDSLGF-SVEALQPGEPGADFGRWPDPVPPRHE-TDVRRVFFI 280          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|664555805|ref|WP_031070629.1| (SAM-dependent methyltransferase [Streptomyces sp. NRRL S-118])

HSP 1 Score: 103.99 bits (258), Expect = 1.334e-23
Identity = 70/191 (36.65%), Postives = 96/191 (50.26%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLISDFADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVN--DFTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YRL+     + YE+D   VL YK   L   A       R+ HR ++       W R L +AG+DP   + W+LEG LYY PEP    +L  + A+S+PGS + AD VN    TL  +R      +  G  WL   F S  +EPE   +  GF +V  V  GE GA +G W  PV PR+  +DV R + +
Sbjct:  103 RAYRLDWPSHVRWYEVDRPAVLAYKEEQLGAAA-----RPRTDHRRVAVDLTSPDWERDLCDAGYDPALPSTWLLEGLLYYIPEPDTHRILQRVAAVSAPGSRIAADIVNAAALTLPHMRGLLDVFSGWGCPWL---FGS--DEPEELFARYGF-DVRAVQPGEEGADFGRWPDPVPPRS-VRDVRRVFFV 281          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|1121500177|ref|WP_073730520.1| (SAM-dependent methyltransferase [Streptomyces sp. CB02414] >gi|1115722140|gb|OKI81360.1| hypothetical protein AMK11_25680 [Streptomyces sp. CB02414])

HSP 1 Score: 103.99 bits (258), Expect = 1.747e-23
Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLIS-DF-ADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVND--FTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLI 191
             +YRL      + +E+D   VL +K   L GV        R+ HR ++ D  ADD  W ++L +AG++P   + W+LEG LYY PEP V  ML  + A+S+PGS + AD VN    TL  +R      A+ G  W+        +EPE   +  GF EV  V  GE GA +G W  PV PR E ++V R + +
Sbjct:  103 RAYRLPWPAHIRYFEVDRPSVLTFKADRLGGVE------PRADHRTVAVDLTADD--WEKELIDAGYNPSLPSTWLLEGLLYYIPEPDVHRMLERVAAISAPGSRISADIVNRAALTLPHMRALLDMFARWGCPWVFGE-----DEPEQLFARHGF-EVRAVQPGEPGADFGRWPDPVPPR-EIREVRRVFFV 280          
BLAST of EWM30569.1 vs. NCBI_GenBank
Match: gi|1087688950|emb|SDP73385.1| (methyltransferase, TIGR00027 family [Streptomyces sp. cf386])

HSP 1 Score: 103.99 bits (258), Expect = 1.753e-23
Identity = 75/196 (38.27%), Postives = 98/196 (50.00%), Query Frame = 0
Query:    9 NSYRLEQMKKCQIYELDVKPVLDYKTSVLAGVADRFPLLARSVHRLIS-DF-ADDVHWVRQLKEAGFDPEKKTVWILEGFLYYFPEPRVQTMLGVIRALSSPGSLLLADHVND--FTLASLR------AQAGDKWLTSTFSSAMEEPETTLSTLGFEEVEVVTVGENGAHYGLWALPVAPRAEKKDVMRTYLIRAT 194
             +YRL      + +E+D   VL++K   L GV        R+ HR ++ D  ADD  W  +L EAG+DP   + W+LEG LYY PE     ML  + AL +PGS + AD VN    TL  +R      A  G  W+  T     +EPE   +  GF +V  V  GE GA YG W  PV PR E  DV R + +  T
Sbjct:  102 RAYRLPWPAHLRYFEVDRPAVLEFKAERLRGVE------PRADHRTVAVDLTADD--WEDRLVEAGYDPTVPSTWLLEGLLYYIPEADAHRMLQRVAALCAPGSRIAADIVNRAALTLPHMRGLLDVFAGWGCPWVFGT-----DEPEDLFTRYGF-DVRAVQPGEPGADYGRWPDPVPPR-EVTDVRRVFFVHGT 282          
The following BLAST results are available for this feature:
BLAST of EWM30569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113236|gb|EWM30569.1|3.700e-145100.00leucine carboxyl methyltransferase [Nannochloropsi... [more]
gi|664261648|ref|WP_030793050.1|2.306e-2638.14SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|1159256430|ref|WP_079190016.1|1.142e-2535.26SAM-dependent methyltransferase [Streptomyces pauc... [more]
gi|1110553607|emb|SHM96175.1|1.267e-2535.26methyltransferase, TIGR00027 family [Streptomyces ... [more]
gi|664215100|ref|WP_030748205.1|5.819e-2537.70SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|639149232|ref|WP_024491297.1|1.242e-2436.60SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|1055497674|ref|WP_067156653.1|4.928e-2437.17SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|664555805|ref|WP_031070629.1|1.334e-2336.65SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|1121500177|ref|WP_073730520.1|1.747e-2337.31SAM-dependent methyltransferase [Streptomyces sp. ... [more]
gi|1087688950|emb|SDP73385.1|1.753e-2338.27methyltransferase, TIGR00027 family [Streptomyces ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna107rna107Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications