EWM29576.1, cds1069 (CDS) Nannochloropsis gaditana

Overview
NameEWM29576.1
Unique Namecds1069
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1118677..1119467 +
Alignment locationCM002456.1:1119678..1120917 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29576.1
Productmate efflux family protein
Orig transcript idgnl|cribi|Naga_100006g98.8665.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1118677..1119467 +
CM002456.1supercontigCM002456.1:1119678..1120917 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0042221response to chemical
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015238drug transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|585112147|gb|EWM29576.1| (mate efflux family protein [Nannochloropsis gaditana])

HSP 1 Score: 1365.52 bits (3533), Expect = 0.000e+0
Identity = 676/676 (100.00%), Postives = 676/676 (100.00%), Query Frame = 0
Query:    1 MGSTLGTGSLANFDFLAALEFSAIHELSSSSLALVTTRLCRAGRGLCRRMNLHINRRSYADTRMYRLHILLQLTLLVVVTAAFTSLSGGSLSTCRRGPSTGCSTPRTLDVERGGIRRVGVTSGRISGHSLALQRKYLCSTMPLTPLSASSGGTSEPSHNMHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS 676
            MGSTLGTGSLANFDFLAALEFSAIHELSSSSLALVTTRLCRAGRGLCRRMNLHINRRSYADTRMYRLHILLQLTLLVVVTAAFTSLSGGSLSTCRRGPSTGCSTPRTLDVERGGIRRVGVTSGRISGHSLALQRKYLCSTMPLTPLSASSGGTSEPSHNMHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS
Sbjct:    1 MGSTLGTGSLANFDFLAALEFSAIHELSSSSLALVTTRLCRAGRGLCRRMNLHINRRSYADTRMYRLHILLQLTLLVVVTAAFTSLSGGSLSTCRRGPSTGCSTPRTLDVERGGIRRVGVTSGRISGHSLALQRKYLCSTMPLTPLSASSGGTSEPSHNMHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS 676          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|553191223|ref|XP_005855340.1| (mate efflux family protein [Nannochloropsis gaditana CCMP526] >gi|422293715|gb|EKU21015.1| mate efflux family protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0
Query:  160 MHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS 676
            MHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS
Sbjct:    1 MHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERDDGAGQTLMSDAVPQIS 517          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|298715216|emb|CBJ27888.1| (MATE efflux family protein [Ectocarpus siliculosus])

HSP 1 Score: 472.626 bits (1215), Expect = 4.516e-156
Identity = 251/470 (53.40%), Postives = 327/470 (69.57%), Query Frame = 0
Query:  202 LTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHA------------IRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNER 659
            +++   +D +I+ LALPTLGAVLIDPCLSLVDT +VG+LG ++LA++GPC A +N +F TASC   VST+VL++  +A+ D  A GRTL  A   +V++G+   VL     +  L LMGA   E++ L  PYL WRA+A PAN+FLLVA GAFRG+G  +    N +VVG+VNLVLDPVLMFSC LGV GAAMATA AQW+GAL Y   M  R+E  GL  G  + PG+ +V++FL AG AM+FR LCNVGAWT+MAS ATRMG++E+AAHQL+LS+WLVIAFVQ+++G++GQVLV+Q LG    S  A                +  AR+IAKRV++ S  +G +L+   ++V P+L+ + C S EV AL S V P +L  FP+CCVVWTWDS++YGASDF YNAK +AV+S   V  ++ SL   WG+LGLW SM +V FG+R+ AH  RFNS  GPFG S      R
Sbjct:  106 VSKPHVFDKEIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMNDRAAIGRTLTLASGLAVSMGVIMAVLFYVNSAGLLSLMGAPQ-EVMSLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPVLMFSCGLGVTGAAMATAAAQWVGALVYTKYMWDRRERLGLAGGVSL-PGLGEVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGILEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDSHKASGLDLKAAWDGAALESRETARSIAKRVLTLSLGLGFSLAACSRLVFPALLSVVCQSREVAALVSQVFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASLCGVVGSVLSLRRGWGVLGLWVSMTYVLFGVRMAAHLWRFNSRRGPFGPSAFMDESR 573          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|502944447|ref|WP_013179423.1| (MATE family efflux transporter [Truepera radiovictrix] >gi|297166353|gb|ADI16064.1| MATE efflux family protein [Truepera radiovictrix DSM 17093])

HSP 1 Score: 201.445 bits (511), Expect = 3.677e-54
Identity = 142/403 (35.24%), Postives = 218/403 (54.09%), Query Frame = 0
Query:  201 RLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSS 603
            R  RV  YD  I  LALP LG +  DP +SLVDT FVG+LG V LA++G  TAL+++ F   + + +  T  ++AR    GD +A GR +  A+T ++  G      +    +  LRLMGA   E++     YL  RA A PA + +    GAFRG  + R  F   L + LVN+ LDP+ +F    G+AGAA AT +AQW GAL +++ +  R+ A G+++    +P  A+++ F+  G  +L R+   +   TL  ++ATR+GV+E+AAHQ+   +WL   F+   V A      +      G+ +        RARA+A R++++   +G+ L+    +  P L  LF   P V+    +V P V L  P+  +V+ WD V  G  DF+Y A  + VS++
Sbjct:    3 RPLRVNPYDRDILALALPALGTLAADPLVSLVDTAFVGRLGSVPLAALGVNTALFSLAFVVFNFL-AYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGE-ELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWAGALGFVWVLFARRRALGISVA---LPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWL---FLALVVDALAVAAQALVARYRGAGQ------PLRARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAA 391          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|551208052|ref|WP_022836102.1| (MATE family efflux transporter [Salisaeta longa])

HSP 1 Score: 174.096 bits (440), Expect = 3.884e-44
Identity = 146/440 (33.18%), Postives = 227/440 (51.59%), Query Frame = 0
Query:  206 QEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKM-TRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLW---SSMVFVYFGLRVVAHYRR 641
              +D  I++LA+P L  +   P ++LVDT FVG+LG VAL ++G   +L++M F   + + +  T   + R    GD    GR +  A+  ++  G      +       L LMGA    ++     YL  RA A PA + +    GAFRG  + R      +   L+NLVLDP+L+F    G+AGAA+ATA AQW GAL + + +   R+EA G+   W   P +  +  FL  G  +  R+   +G  TL  ++A R+GV  +AAHQ+   +WL +A V DA+  AGQ LVS+ +G         R   A AR++  R++ +  ++G  L +   ++ P L   F   P  IAL  +V P V    P+  +V+  D +Y GA  F Y AK +  S+++A ++ L +    WGL G+W   ++++ V  G   V + RR
Sbjct:    8 HSHDRAIFDLAVPALAGLAAGPLVTLVDTAFVGQLGPVALGALGINASLFSMTFVIFNFL-AYGTTPRVGRALGEGDRAEAGRVVLRALVLALGAGAVALAALQLLARPLLALMGAGE-RLMEPALTYLRIRACAGPAVLLITAGNGAFRGYQDTRTPMAITVGFNLINLVLDPLLIFGLGWGLAGAALATAGAQWTGALIFWWLLLNTRREALGIPHTW---PSLRSLWPFLKIGRDLFLRTAALIGTMTLATAVAARIGVTAVAAHQVAAQLWLFLALVVDALAVAGQALVSKHVG---------RGDVAAARSVGNRLLVWGLVVGCGLGVGFALLQPVLPAFFTEDPATIALVLTVFPFVAALQPLNGLVFVADGLYMGAERFGYLAKAMLASTAVAAAVLLLTRPLGWGLAGVWWGLTALMLVRAGTLAVPYVRR 433          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|1137218136|gb|OMO84967.1| (Multi antimicrobial extrusion protein [Corchorus capsularis])

HSP 1 Score: 174.096 bits (440), Expect = 2.664e-43
Identity = 141/522 (27.01%), Postives = 259/522 (49.62%), Query Frame = 0
Query:  144 TPLSASSGGTSEPSHNMHQAPSAVTPVPAAVHAAHSHIGEEGGHQGGILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVS----TAVLIARYKAL-----GDG--QATGRTLFTAITSSVAL----GIFFTVLMASRPSQALRLMGASSPEMIRLGAP-YLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPF 649
            +P ++      E +    ++ S + P P  V  ++            + R +++ +    ++ E + +I  +ALP   A+  DP  SLVDT FVG LG V LA++G   +++N++    S +F+V     T   +A  +AL      DG  +  G+ +  ++++S+AL    GI   V ++      + +MG      +R  A  +L WRA   P  +  L A G FRG  + +      +   ++N +LD +L+F   LGVAGAA+AT I++++ AL  ++++  + E    N+ W+       V  +L +G  ++ R++  +G  TL  S+A + G V +A HQ+ + +WL I+ + DA+  +GQ L++        S+   R    +AR +   V+    + G AL+++  +   +   LF + P V+ +  S    V    PV  + +  D +YYG SD++Y A  + V   ++ +  L +    +GL G+W+ + F++  LR +A   R N++ GP+
Sbjct:   51 SPTTSLDTSQQEENDQRKKSQSPLPPRPVDVAVSNPTFSL-------LFRRIRDGF----KIDELNLEILSIALPAALALAADPITSLVDTAFVGHLGSVELAAVGISVSIFNLV----SKLFNVPLLNITTSFVAEEQALISKNSDDGAFEQKGKEVLPSVSTSLALAAGLGIAEAVTLSLGSGSLMNIMGIPVDSPMREPAEQFLTWRAFGAPPIVIALAAQGTFRGFKDTKTPLYAIVAGNILNAILDTILIFPIGLGVAGAAVATVISEYLIALILLWELNGKVELISPNVDWR------KVAIYLKSGGLLIGRTIATLGTLTLATSLAAKQGPVPMAGHQICIEVWLAISLLTDALALSGQALLAADY-----SQANYR----QARRVIYSVLQIGLVTGFALAILLFLGFGAFSSLFSTDPLVLQIAWSGTLFVAGSQPVNAIAFVIDGLYYGVSDYEYAAISMVVVGLVSSAFLLVATPL-FGLAGVWTGL-FLFMALRAIAGILRLNTKSGPW 540          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|508698806|gb|EOX90702.1| (MATE efflux family protein [Theobroma cacao])

HSP 1 Score: 161.77 bits (408), Expect = 5.511e-39
Identity = 142/474 (29.96%), Postives = 239/474 (50.42%), Query Frame = 0
Query:  190 GILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASC-MFSVSTAVLIARY----KALGDGQATGRTLF----TAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGA-PYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNL---VLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQ--EFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGP 648
            GIL S +      + +Q    ++  LALP +    I+P   L++T F+G+LG   LAS      ++N+I    +  + SV+T+ +        K     ++  R       TA+  ++A+GIF    M    +  + +MG SS   + + A  +L  RA   PA +  L   G FRG  + +   T  L +GL NL    L P+LM+S  LGV GAA++T ++Q+I A+  I+ + +R           ++PG+ ++Q   +L +G  +L R+L +V   TL  S+A R+G + +AAHQ+ L +WL I+ + DA  A+GQ L++  L          +   AR + I    +      G++L++I      SL  LF    EV+ +  SVL +V    P+  + +T+D ++YG SDF Y A  + V  +++ +  L +     GL G+W+ +  ++ GLR  A   R +S++GP
Sbjct:   88 GILDSTRTPLTSQSSLQSVQTELIMLALPAIVGQAIEPLAQLMETAFIGRLGAYQLASAAVSITIFNIISKVFNIPLLSVATSFVAEDISKTRKEFASDESAERQFLPSVSTALLLALAIGIFEASAMYMGSAVFVNIMGLSSASPMYIPAQKFLSVRAIGAPAVVVSLAIQGIFRGFKDTK---TPVLCLGLGNLSAIFLFPILMYSYGLGVTGAAISTVLSQYIVAILMIWHLNKRTVL--------LLPGIKNLQFGGYLKSGGFLLGRTLVSVMTITLSTSMAARLGPLALAAHQICLQVWLSISLLFDAQAASGQALIASSLA---------KGDYARVKEITYCTLKTGLFTGISLAVILGASFGSLATLFTRDKEVLRIIRSVLLLVSSSLPITALAYTFDGLHYGISDFSYAAFSMMVVGAVSSAFLLFA-SSVMGLSGVWTGLA-LFMGLRTGAGLLRISSKNGP 539          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|1063462728|ref|XP_007046545.2| (PREDICTED: protein DETOXIFICATION 45, chloroplastic isoform X2 [Theobroma cacao])

HSP 1 Score: 161.384 bits (407), Expect = 9.101e-39
Identity = 141/474 (29.75%), Postives = 239/474 (50.42%), Query Frame = 0
Query:  190 GILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASC-MFSVSTAVLIARY----KALGDGQATGRTLF----TAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGA-PYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNL---VLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQ--EFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGP 648
            GIL S +      + +Q    ++  LALP +    I+P   L++T F+G+LG   LAS      ++N+I    +  + SV+T+ +        K     ++  R       TA+  ++A+GIF    M    +  + +MG SS   + + A  +L  RA   PA +  L   G FRG  + +   T  L +GL NL    L P+LM+S  LGV GAA++T ++Q+I A+  I+ + +R           ++PG+ ++Q   +L +G  +L R+L +V   TL  S+A R+G + +AAHQ+ L +WL ++ + DA  A+GQ L++  L          +   AR + I    +      G++L++I      SL  LF    EV+ +  SVL +V    P+  + +T+D ++YG SDF Y A  + V  +++ +  L +     GL G+W+ +  ++ GLR  A   R +S++GP
Sbjct:   88 GILDSTRTPLTSQSSLQSVQTELIMLALPAIVGQAIEPLAQLMETAFIGRLGAYQLASAAVSITIFNIISKVFNIPLLSVATSFVAEDISETRKEFASDESAERQFLPSVSTALLLALAIGIFEASAMYMGSAVFVNIMGLSSASPMYIPAQKFLSVRAIGAPAVVVSLAIQGIFRGFKDTK---TPVLCLGLGNLSAIFLFPILMYSYGLGVTGAAISTVLSQYIVAILMIWHLNKRTVL--------LLPGIKNLQFGGYLKSGGFLLGRTLVSVMTITLSTSMAARLGPLALAAHQICLQVWLSVSLLFDAQAASGQALIASSLA---------KGDYARVKEITYCTLKTGLFTGISLAVILGASFGSLATLFTRDKEVLRIIRSVLLLVSSSLPITALAYTFDGLHYGISDFSYAAFSMMVVGAVSSAFLLFA-SSVMGLSGVWTGLA-LFMGLRTGAGLLRISSKNGP 539          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|747094468|ref|XP_011095071.1| (protein DETOXIFICATION 44, chloroplastic [Sesamum indicum])

HSP 1 Score: 160.999 bits (406), Expect = 1.577e-38
Identity = 133/445 (29.89%), Postives = 225/445 (50.56%), Query Frame = 0
Query:  226 DPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASC-MFSVSTAVLI----ARYKALGDGQATGRTLFT---------AITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAP-YLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNL-GWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQL--GNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDF---KYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPF 649
            DP  SLVDT FVG LG   LA++G   A++N++    +  + +V+T+ +     A  KA  D   T + L +         AI  + ALGI   V +++  S  +  MG      +R+ A  +L  RA   P  +  L A G FRG  + +          L+N +LDP+L+FS  LG+ GAA+AT I++++ AL  ++K++        ++ G +I+       ++L +G  +  R+L  +   TL  S+A R G +++A HQ+   +WL ++ + DA+  AGQ L++     GN G            AR +  +V+   +++GVAL++I  +   +L  LF +  +V+ +  S    V    P+  + +  D +YYG SDF    Y+   + + SS+ + LT  S    +GL G+W  + F++  LRVVA   R ++  GP+
Sbjct:  128 DPITSLVDTGFVGHLGSAELAAVGVSGAVFNLVSKLFNVPLLNVTTSFVAEEQAAIVKAADDYSQTAKDLQSKIFLPSVSNAIILAAALGIVEAVALSTGSSFLMNTMGIPVDSPMRMPAEQFLTLRALGAPPIVVALAAQGTFRGFKDTKTPLYAVGAGNLLNAILDPILIFSFGLGIGGAAVATVISEYLTALILLWKLSDEVLLIAPSINGQRIV-------QYLKSGALLTARTLAVLAITTLATSMAAREGPIQMAGHQICFEVWLALSLLNDALALAGQTLLASDYSQGNYG-----------LARQVTYKVLQIGSLMGVALAVILFLGFGALSSLFSTDSKVLEIARSGTLFVAGSQPMNAIAFVLDGLYYGVSDFGFAAYSMVFVGLISSVFILLTAPS----FGLAGVWGGL-FLFMTLRVVAGMLRLSTRSGPW 549          
BLAST of EWM29576.1 vs. NCBI_GenBank
Match: gi|1149715739|ref|XP_020183912.1| (protein DETOXIFICATION 44, chloroplastic-like isoform X2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 158.688 bits (400), Expect = 7.459e-38
Identity = 136/453 (30.02%), Postives = 225/453 (49.67%), Query Frame = 0
Query:  226 DPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVS----TAVLIARYKALGDG-QATG--------RTLFTAITSSVAL----GIFFTVLMASRPSQALRLMGASSPEMIRLGAP-YLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNERD 660
            DP  +LVDT FVG +G   LA++G   +++N++    S +F+V     T   +A  +A+ D  + TG        R    A+T+S+AL    G+  TV +       +  +G      +R+ A  +L +RA   P  +  L A GAFRG+ + +       V  LVN +LD + +F   LGV GAA+AT  ++++ A   ++K+  +   F      KII G   +  +L +G  ++ R++  +   TL  S+A R G V +A HQL L +WL I+ + DA+  AGQ L++ +           +R   +AR +  RV+    + G AL++I      S   LF   P V+ +  S +  V +  P+  V +  D +YYG SDF Y A  +  + +I+ +  L +   E+GL G+W+ ++ ++  LR VA   R  S+ GP+       + RD
Sbjct:  113 DPIAALVDTAFVGHIGSTELAAVGVSISIFNLV----SKLFNVPLLNVTTSFVAEQQAVDDSYRGTGENNKLTEERKFLPAVTTSLALASGIGLMETVALIFGSGTLMDFIGIPVDSPVRIPAEQFLTFRAYGAPPIIVALAAQGAFRGLMDTKTPLYAIGVGNLVNAILDAIFVFPLGLGVRGAALATVTSEYVIACILLWKLNSKVVIFS----GKIIGG--GMIRYLKSGGLLIGRTIAVLLTMTLSTSLAAREGPVPMAGHQLCLQVWLTISLLNDALALAGQALLATEY---------TKRNYKQARMVLYRVLQIGGVTGTALAIILFFGFGSFSSLFTDDPAVLGIAKSGVWFVAISQPINAVAFVVDGLYYGVSDFAYAAYSMFFAGAISSAFLLVAAP-EFGLGGVWAGLI-LFMSLRAVAGLWRLGSKGGPWNSILSETDLRD 544          
The following BLAST results are available for this feature:
BLAST of EWM29576.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112147|gb|EWM29576.1|0.000e+0100.00mate efflux family protein [Nannochloropsis gadita... [more]
gi|553191223|ref|XP_005855340.1|0.000e+0100.00mate efflux family protein [Nannochloropsis gadita... [more]
gi|298715216|emb|CBJ27888.1|4.516e-15653.40MATE efflux family protein [Ectocarpus siliculosus... [more]
gi|502944447|ref|WP_013179423.1|3.677e-5435.24MATE family efflux transporter [Truepera radiovict... [more]
gi|551208052|ref|WP_022836102.1|3.884e-4433.18MATE family efflux transporter [Salisaeta longa][more]
gi|1137218136|gb|OMO84967.1|2.664e-4327.01Multi antimicrobial extrusion protein [Corchorus c... [more]
gi|508698806|gb|EOX90702.1|5.511e-3929.96MATE efflux family protein [Theobroma cacao][more]
gi|1063462728|ref|XP_007046545.2|9.101e-3929.75PREDICTED: protein DETOXIFICATION 45, chloroplasti... [more]
gi|747094468|ref|XP_011095071.1|1.577e-3829.89protein DETOXIFICATION 44, chloroplastic [Sesamum ... [more]
gi|1149715739|ref|XP_020183912.1|7.459e-3830.02protein DETOXIFICATION 44, chloroplastic-like isof... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1070rna1070Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications