EWM29541.1, cds1061 (CDS) Nannochloropsis gaditana

Overview
NameEWM29541.1
Unique Namecds1061
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1075787..1076926 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29541.1
Productdeoxyribodipyrimidine photo-lyase
Orig transcript idgnl|cribi|Naga_100006g106.8630.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1075787..1076926 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003904deoxyribodipyrimidine photo-lyase activity
GO:0003913DNA photolyase activity
Vocabulary: INTERPRO
TermDefinition
IPR008148DNA_photolyase_2
IPR005101Photolyase_FAD-bd/Cryptochr_C
IPR006050DNA_photolyase_N
IPR014729Rossmann-like_a/b/a_fold
Homology
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|585112112|gb|EWM29541.1| (deoxyribodipyrimidine photo-lyase [Nannochloropsis gaditana])

HSP 1 Score: 780.015 bits (2013), Expect = 0.000e+0
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query:    1 MSAAKKRSGAIDEGTPGPTKKPKAGDSASIKLPDWFTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            MSAAKKRSGAIDEGTPGPTKKPKAGDSASIKLPDWFTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR
Sbjct:    1 MSAAKKRSGAIDEGTPGPTKKPKAGDSASIKLPDWFTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|299473188|emb|CBN78764.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 338.576 bits (867), Expect = 2.383e-109
Identity = 175/354 (49.44%), Postives = 227/354 (64.12%), Query Frame = 0
Query:   28 ASIKLPDWFTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAG--RPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            A ++ PDWF   R+R LT +   P+  G CVVYWM+RDQR EDNWAML A++LA +  VP+VV F L      +P  TLR  G+ML+GL+E E  L++K IPF+LLQ   P D+VPA   EL A A++TD  PLR P   A+ VA  L+ +G   PLFQVDAHN+VPVW  S K E  ARTIR KIH   P +    P   L+PN        P  +  P    ++     L LD  V EI WL+PGA+   +NL +F+E  ++ FA+  N+P E   S+MSPYFN GQ+S QA +++VKA +R+ D + AF+E+GVVRRELSDNFCFY   YD+L+ AAGWA+ESL  H ND+
Sbjct:    2 ALLETPDWFKAERVRCLTDASV-PRDQGNCVVYWMSRDQRAEDNWAMLYAKNLAQEGGVPLVVAFVLGAWQVTEPKTTLRYAGFMLKGLEETEGDLRKKKIPFHLLQAAEPRDVVPAFAKELGALAIVTDMCPLRDPTRRAREVAEELNKSGDGTPLFQVDAHNVVPVWATSDKQETMARTIRPKIH-ARPDFLGAIPE--LSPN--------PQGTKLPAATDWKAAQTSLDLDRSVPEISWLKPGAKGASDNLQSFIETRMKGFADLSNNPNEDVCSHMSPYFNLGQMSAQAAVMRVKASRRHPDGVKAFVEQGVVRRELSDNFCFYNDNYDNLSGAAGWARESLEAHANDQ 343          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|167524661|ref|XP_001746666.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163774936|gb|EDQ88562.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 308.916 bits (790), Expect = 8.216e-94
Identity = 156/327 (47.71%), Postives = 211/327 (64.53%), Query Frame = 0
Query:   55 GKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKR--YHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            G+CV+YWM+RDQR  DNWA+L ARHLA +++VP+ V F L P       AT+R +G+ML GLQ VE  L++KHIPF+LL  G  +D++P    E +A AV+ D SPLR P+A  +   + L     PL+QVDAHNIVPVW ASPK E  ARTIR KIH  L     PFP      N              P+   ++K    L ++  VKE+DWL+PG   G + L+ F+ + L  +A+ RNDP   A+SN+SPY++FGQ+SVQ V+L++++ +R  Y + + A+IEE VVRRELSDNFCFY   YDS+  A+ WAQE+L VH+ D+
Sbjct:  405 GQCVLYWMSRDQRPTDNWALLYARHLAQERDVPLRVVFCLVPKFLE---ATIRQFGFMLDGLQVVETHLRKKHIPFHLL-TGYAKDVLPKFAEEQEACAVVCDMSPLRVPMAWVKETGSKLKDMNVPLYQVDAHNIVPVWHASPKQEYAARTIRNKIHQKLDTCLQPFPELESNSNSVQL----------PDTVDWKKARESLEINWDVKEVDWLKPGYEGGMKMLEEFINERLHRYADDRNDPNLDALSNLSPYYHFGQISVQRVVLELRSKQRGKYAEGVKAYIEEAVVRRELSDNFCFYNHRYDSVEGASAWAQETLDVHSKDK 717          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|662565365|gb|AIE57497.1| (CPD photolyase, partial [Platynereis dumerilii])

HSP 1 Score: 299.286 bits (765), Expect = 1.144e-93
Identity = 155/345 (44.93%), Postives = 213/345 (61.74%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVK-RYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            F   R+R L++    P    K +VYWM+RDQRV+DNWA L A+ LA +  VP+ VCF L P       AT+R YG+ML+GL+EVE   ++  I F+LL  G  +D +P  V E +   V+TDFSP+R P      V   L     P  QVDAHNIVP W+ASPKLE GARTIR KIH +L  YFT FP     P+ A         +A PE   +E V   L +D  V E+DW+ PG   G  NL++F+++ L++F   RNDP + A+S+MSP+++FGQVSVQ  ML V+  + +Y + +  +IEEG++RREL+DNFC+Y   YD++  A  WA+++L  H  D+
Sbjct:   71 FNKKRVRVLSSQQEFPDE-NKGIVYWMSRDQRVQDNWAFLYAQKLALKAEVPLHVCFCLVPKFLE---ATIRHYGFMLKGLREVEEECRKLDINFHLLI-GYAKDKLPEFVKEQKIGGVVTDFSPMRVPAGWVNEVKKLL-PKDVPFCQVDAHNIVPCWEASPKLEYGARTIRSKIHKVLSTYFTEFPPVIRHPHKA---------TAKPEPIDFEAVQESLDVDRTVGEVDWVTPGTTGGLRNLESFIKQRLKYFNADRNDPNKNALSHMSPWYHFGQVSVQRGMLMVRQYRNKYKEGVEGYIEEGIIRRELADNFCYYNENYDNIDGAYEWARKTLNDHKKDK 400          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|443696862|gb|ELT97477.1| (hypothetical protein CAPTEDRAFT_152478 [Capitella teleta])

HSP 1 Score: 298.13 bits (762), Expect = 1.532e-93
Identity = 162/345 (46.96%), Postives = 211/345 (61.16%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVK-RYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            F   R+RTLT  C KP    K V+YWM+RDQRV+DNWA+L ++ LA    VP+ + F L P       AT+R +G+ML+GLQEVE   K   I F+L   G   D +P  V +    A++TDF PLR P      +  +L     PLFQVDAHNIVP W+ASPK E GARTIR KIH+ L KYFT FP     P    A  A     AP     + +    L +D  VKE+DW  PG  AG +NL++F++K L  F   RN+P + A+SNMSP+F+FG V+ Q  ML V  +K +Y  S+AA+IEEGV+RREL DN+CFYQP YD++  A  WA+ +L+ H  D+
Sbjct:   46 FNKNRVRTLT-PCKKPSPDSKGVLYWMSRDQRVQDNWALLYSQKLALDLEVPLYINFCLVPKFLE---ATIRQFGFMLKGLQEVEKECKSLRISFHL-HLGHATDHLPQFVEDHNIGAIVTDFCPLRVPTKWVTDLVKSL-PDEIPLFQVDAHNIVPCWEASPKQEYGARTIRNKIHNQLSKYFTEFP-----PVIQHAFEA----KAPCPAVDWIEAEKSLEVDRSVKEVDWATPGTTAGLKNLESFIQKRLGNFDADRNNPNKNALSNMSPWFHFGHVAPQRAMLMVNEMKTKYSKSVAAYIEEGVIRRELCDNYCFYQPNYDNIDGAYEWARLTLKAHRKDK 375          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|761913357|ref|XP_003388746.2| (PREDICTED: deoxyribodipyrimidine photo-lyase-like [Amphimedon queenslandica])

HSP 1 Score: 297.36 bits (760), Expect = 2.734e-93
Identity = 156/350 (44.57%), Postives = 214/350 (61.14%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVV-----YWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYH-DSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            F   R R +T    KP A    +V     YWM+RDQRV+DNW ++ ++ LA +  VP++V F L P   +   AT R Y +M+ GLQEVE  L +  IPF+LL  G  +  +P+ +++   S V+ DFSPLR PL   +   A LD    PL QVDAHNIVPVW AS K E  ARTIR KIH  LP++ T FP   +  +++     L  +S       + K    L +D  V E+ W  PG  AG + LD F  K L+FFA +RNDP + ++SN+SP+++FGQV VQ  +LKVK+    H +S++A+IEE VVRREL+DNFC+Y P YDS++ AA WAQ++L+ H  D+
Sbjct:   27 FNMKRCRLIT----KPTAGKSSIVKGPVLYWMSRDQRVQDNWGLVYSQELANKHGVPLLVAFTLVPKFLD---ATWRQYSFMMSGLQEVEKELLKLKIPFHLLL-GKAQSCLPSFIAKESVSVVVCDFSPLRVPLGWVKETGAELDKIKVPLVQVDAHNIVPVWLASDKQEYAARTIRNKIHKFLPEFLTEFPPVTVHTHNS----KLTMKST-----NWIKARESLEVDMTVSEVSWATPGTNAGLKVLDDFCTKRLKFFAAQRNDPNKDSLSNLSPWYHFGQVGVQRAILKVKSYSSKHSESVSAYIEEAVVRRELADNFCYYNPHYDSISGAAQWAQDTLKAHKKDK 359          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|1133485160|ref|XP_019860679.1| (PREDICTED: deoxyribodipyrimidine photo-lyase-like [Amphimedon queenslandica])

HSP 1 Score: 295.819 bits (756), Expect = 4.969e-93
Identity = 156/350 (44.57%), Postives = 212/350 (60.57%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVV-----YWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYH-DSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            F   R R +T    KP A    +V     YWM+RDQRV+DNW ++ ++ LA +  VP++V F L P   +   AT R Y +M+ GLQEVE  L +  IPF+LL  G  +  +P  +++   S V+ DFSPLR  L   +   A LD    PL QVDAHNIVPVW AS K E  ART+R KIH  LP++ T FP   L  +++     L  +S       + K    L +D  V E+ W  PG  AG + LD F  K L+FFA +RNDP + ++SN+SP+F+FGQV VQ  +LKVK+    H +S++A+IEE VVRREL+DNFC+Y P YDS++ AA WAQ++L+ H  D+
Sbjct:   54 FNMKRCRLIT----KPTAGKSSIVKGPVLYWMSRDQRVQDNWGLVYSQELANKHGVPLLVAFTLVPKFLD---ATWRQYSFMMSGLQEVEKELLKLKIPFHLLL-GKAQSCLPPFIAKESVSVVVCDFSPLRVSLGWVKETGAELDKIKVPLVQVDAHNIVPVWLASDKQEYAARTLRNKIHKFLPEFLTEFPLVTLHTHNS----KLTMKST-----NWIKAKESLEVDMTVSEVSWATPGTNAGLKVLDDFCTKRLKFFAAQRNDPNKDSLSNLSPWFHFGQVGVQRAILKVKSYSSKHSESVSAYIEEAVVRRELADNFCYYNPHYDSISGAAQWAQDTLKAHKKDK 386          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|405960251|gb|EKC26192.1| (Deoxyribodipyrimidine photo-lyase [Crassostrea gigas])

HSP 1 Score: 296.975 bits (759), Expect = 6.250e-93
Identity = 155/344 (45.06%), Postives = 215/344 (62.50%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVK-RYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTND 378
            F   R++ L+     P      VVYWM+RDQRV+DNWAML A+ LA +  VP+ VCF L P   +   AT+R Y ++L+GL+EVE   +   I F+LL  G  +D++P+ V + Q   VITDFSPLR P     AV+ AL  +  PL QVDAHN+VP W+ASPKLE GARTIR KIH+ L +Y T FP     P+   A       S P +   + K    L +D  V E+DW  PG+ AG   L++F  + L++F   RN+P + A+SN+SP+  FGQ+SVQ  +L V+  + +Y +S+ ++IEE ++RRELSDNFCFY   YDS+  A  WA+++L+VH +D
Sbjct:   59 FNKKRIKVLSKVQDFPDGKNG-VVYWMSRDQRVQDNWAMLYAQRLALKMEVPLHVCFCLVPKFLD---ATIRHYRFILKGLEEVEKECQELGISFHLLI-GHAKDVLPSFVKDHQIGGVITDFSPLRVPAEWVSAVSKAL-PSDIPLCQVDAHNVVPCWEASPKLEYGARTIRNKIHNQLSQYLTEFPPVSKHPHKPKAA------SQPVD---WSKAEDSLEVDRKVTEVDWAVPGSTAGLNMLESFCHERLKYFGSDRNNPNKNALSNLSPWIKFGQISVQRCILTVRQYRSKYKESVESYIEEAIIRRELSDNFCFYNKNYDSIDGAYDWAKQTLKVHADD 387          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|321460192|gb|EFX71237.1| (DNA photolyase 2 [Daphnia pulex])

HSP 1 Score: 293.893 bits (751), Expect = 1.054e-91
Identity = 151/345 (43.77%), Postives = 215/345 (62.32%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYH-DSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
            F   R R L+ S       G  ++YWM+R+QRV+DNWA+L A+ LA +  +P+ +CF L P       AT+R +G+ML+GL+EVE   ++  I F+LL+ G  +  VP L+++L+  AV+ DFSPLR PL+    V  ++     P  Q+DAHNIVPVW AS K EVGARTIRKKI+D L ++ T FP   + P+ A             +   ++     L +D  V E+DW+ PG ++G + L  F ++ L+ +AEKRNDP   A+SN+SP+ +FGQ+S Q  +L+VK  K  H  S+ A++EE ++RRELSDNFCFY   YD+L  AA WAQE+L VH  D+
Sbjct:   60 FNKKRCRLLSKSMELGDCGGG-ILYWMSREQRVQDNWALLYAQRLALKMKLPLHICFCLVPTFLG---ATIRQFGFMLKGLEEVETECQKLKIEFHLLK-GESQICVPDLITKLKLDAVVADFSPLRVPLSWIDKVKESI-PKNVPFCQIDAHNIVPVWVASDKQEVGARTIRKKINDKLDEFLTEFPPVIVHPHPA---------KTKAKSVDWKAADAYLEVDRTVGEVDWITPGTKSGLQELFNFCQRRLKMYAEKRNDPNLAALSNLSPWLHFGQISAQRCILEVKGYKTKHAKSVDAYMEETIIRRELSDNFCFYNTNYDNLKGAANWAQETLEVHKKDK 389          
BLAST of EWM29541.1 vs. NCBI_GenBank
Match: gi|1139855320|ref|XP_011422754.2| (PREDICTED: deoxyribodipyrimidine photo-lyase [Crassostrea gigas])

HSP 1 Score: 295.819 bits (756), Expect = 1.526e-91
Identity = 155/344 (45.06%), Postives = 215/344 (62.50%), Query Frame = 0
Query:   36 FTPGRLRTLTTSCTKPQAAGKCVVYWMARDQRVEDNWAMLLARHLATQQNVPVVVCFNLTPPVPNDPLATLRAYGWMLRGLQEVEAALKRKHIPFYLLQEGPPEDMVPALVSELQASAVITDFSPLRGPLADAQAVAAALDAAGRPLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVK-RYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTND 378
            F   R++ L+     P      VVYWM+RDQRV+DNWAML A+ LA +  VP+ VCF L P   +   AT+R Y ++L+GL+EVE   +   I F+LL  G  +D++P+ V + Q   VITDFSPLR P     AV+ AL  +  PL QVDAHN+VP W+ASPKLE GARTIR KIH+ L +Y T FP     P+   A       S P +   + K    L +D  V E+DW  PG+ AG   L++F  + L++F   RN+P + A+SN+SP+  FGQ+SVQ  +L V+  + +Y +S+ ++IEE ++RRELSDNFCFY   YDS+  A  WA+++L+VH +D
Sbjct:  150 FNKKRIKVLSKVQDFPDGKNG-VVYWMSRDQRVQDNWAMLYAQRLALKMEVPLHVCFCLVPKFLD---ATIRHYRFILKGLEEVEKECQELGISFHLLI-GHAKDVLPSFVKDHQIGGVITDFSPLRVPAEWVSAVSKAL-PSDIPLCQVDAHNVVPCWEASPKLEYGARTIRNKIHNQLSQYLTEFPPVSKHPHKPKAA------SQPVD---WSKAEDSLEVDRKVTEVDWAVPGSTAGLNMLESFCHERLKYFGSDRNNPNKNALSNLSPWIKFGQISVQRCILTVRQYRSKYKESVESYIEEAIIRRELSDNFCFYNKNYDSIDGAYDWAKQTLKVHADD 478          
The following BLAST results are available for this feature:
BLAST of EWM29541.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112112|gb|EWM29541.1|0.000e+0100.00deoxyribodipyrimidine photo-lyase [Nannochloropsis... [more]
gi|299473188|emb|CBN78764.1|2.383e-10949.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|167524661|ref|XP_001746666.1|8.216e-9447.71hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|662565365|gb|AIE57497.1|1.144e-9344.93CPD photolyase, partial [Platynereis dumerilii][more]
gi|443696862|gb|ELT97477.1|1.532e-9346.96hypothetical protein CAPTEDRAFT_152478 [Capitella ... [more]
gi|761913357|ref|XP_003388746.2|2.734e-9344.57PREDICTED: deoxyribodipyrimidine photo-lyase-like ... [more]
gi|1133485160|ref|XP_019860679.1|4.969e-9344.57PREDICTED: deoxyribodipyrimidine photo-lyase-like ... [more]
gi|405960251|gb|EKC26192.1|6.250e-9345.06Deoxyribodipyrimidine photo-lyase [Crassostrea gig... [more]
gi|321460192|gb|EFX71237.1|1.054e-9143.77DNA photolyase 2 [Daphnia pulex][more]
gi|1139855320|ref|XP_011422754.2|1.526e-9145.06PREDICTED: deoxyribodipyrimidine photo-lyase [Cras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1062rna1062Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications