EWM29544.1, cds1059 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|585112115|gb|EWM29544.1| (dihydrolipoamide s-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0 Query: 1 MVLSAGTRRLFNPSQSVFYVRAAVCKPVQPYRRCGLSALVRTLRREHSTAFIPTHRRLSTADGSGDNGTQSHDPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHDMEAAMCKAGEEGKGEPVEK 279 MVLSAGTRRLFNPSQSVFYVRAAVCKPVQPYRRCGLSALVRTLRREHSTAFIPTHRRLSTADGSGDNGTQSHDPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHDMEAAMCKAGEEGKGEPVEK Sbjct: 1 MVLSAGTRRLFNPSQSVFYVRAAVCKPVQPYRRCGLSALVRTLRREHSTAFIPTHRRLSTADGSGDNGTQSHDPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHDMEAAMCKAGEEGKGEPVEK 279
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|298704814|emb|CBJ48962.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.538 bits (275), Expect = 2.016e-24 Identity = 63/190 (33.16%), Postives = 101/190 (53.16%), Query Frame = 0 Query: 73 DPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKL-----VRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGV 257 +P H + +P I + + LT W+ GDVI+ GDVVCE+E++QF+VG++V+ G+LA ILV AGT GVP G + V+ E+ + Y SE + E+ D + L +RNG + + + L +LAR++D +LL+ FE FEG+ + + D D + FL + + + Sbjct: 178 EPRHAHIEMPTITEAERVATLTSWKVQVGDVIEVGDVVCEIELEQFSVGVKVETPGFLAEILVEAGTEGVPVGTDIGTIVHSEE------EIALYQQAQAHESEDKEVKADTEVIADPAGTFSWKDVLKDVLRLRNGGMLSEGESSTLMSLARNKDSELLQAFEGCFEGD--KYKGDIDDDLFLAQAKDI 359
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|813164224|ref|XP_012203172.1| (hypothetical protein SPRG_08540 [Saprolegnia parasitica CBS 223.65] >gi|641532136|gb|KDO26179.1| hypothetical protein SPRG_08540 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 95.9005 bits (237), Expect = 3.858e-20 Identity = 68/201 (33.83%), Postives = 94/201 (46.77%), Query Frame = 0 Query: 71 SHDPPHFKLILPDI--GQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAI------DGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHDMEA 263 S P H K L DI Q + L +W K EG + G +C++E + GME DD GYLA+I VPAG V + LAV V +E+ P A SE + + DG LL+ L +L + G+ + + L++LAR D +LLRV+ SF EG FD EFF+E +V + A Sbjct: 23 SKLPNHIKFRLMDIEFTQVMEGSKLVKWYKQEGQKVGPGGPLCDIETPELIFGMETDDAGYLAKIFVPAGAENVRPNQVLAVIVPKEE-----DIAPFIQALAENPSEIEEYKPSTPVVVDPTTITDGSDLLRVLSQLNKEGAFPSESDYKVLKSLARKNDAELLRVYSGSFLAEGGAA---FDKEFFVENCLDLVEEHAA 215
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|698807226|ref|XP_009836642.1| (hypothetical protein H257_11423 [Aphanomyces astaci] >gi|574108198|gb|ETV73706.1| hypothetical protein H257_11423 [Aphanomyces astaci]) HSP 1 Score: 95.1301 bits (235), Expect = 9.190e-20 Identity = 65/189 (34.39%), Postives = 92/189 (48.68%), Query Frame = 0 Query: 74 PPHFKLIL--PDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGA--EEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVV 258 P H K+ + DI QT + L RW EGD I G +CEVE +E +D+GYLA+I VPA + V E LAV V E F + H + S+ A DG LL+ L L + G+ ++ + L++LAR D+QLL V++ SFE + FD +FF+E +V Sbjct: 31 PDHIKIRMLDMDITQTIEGSKLLRWFANEGDKIGPGKPICEVETPDLLFSLESEDEGYLAKIFVPAKSDHVRPNEVLAVIVPTEDDIAPFLTALTEHPDEIEVHKKSSTAITASDSTPTDGADLLRVLSHLHKEGAFPSEDVYKTLKSLARKNDEQLLLVYKGSFEEDN--TTSGFDKDFFVENCVDLV 217
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|669149544|ref|XP_008610334.1| (hypothetical protein SDRG_06335 [Saprolegnia diclina VS20] >gi|530737986|gb|EQC36228.1| hypothetical protein SDRG_06335 [Saprolegnia diclina VS20]) HSP 1 Score: 93.9745 bits (232), Expect = 1.535e-19 Identity = 67/201 (33.33%), Postives = 93/201 (46.27%), Query Frame = 0 Query: 71 SHDPPHFKLILPDI--GQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEASAGAEEGEMAI------DGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHDMEA 263 S P H K L DI Q + L +W K EG + G +C++E + GME DD GYLA+I VPAG V + LAV V +E+ P A SE + + DG LL+ L +L + G+ + + L++LAR D +LLRV+ SF E FD EFF+E +V + A Sbjct: 23 SKLPNHIKFRLMDIEFTQVMEGSKLVKWYKQEGQKVGPGGPLCDIETPELIFGMETDDAGYLAKIFVPAGAENVRPNQVLAVIVPKEE-----DIAPFIQALAENPSEIEEYKPSTPVVVDPTTITDGSDLLRLLSQLNKEGAFPTESDYKVLKSLARKNDAELLRVYSGSFLAESGAA---FDKEFFVENCLDLVEEHAA 215
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|1173929459|gb|OQR82687.1| (hypothetical protein ACHHYP_15654 [Achlya hypogyna]) HSP 1 Score: 93.9745 bits (232), Expect = 1.568e-19 Identity = 68/200 (34.00%), Postives = 96/200 (48.00%), Query Frame = 0 Query: 71 SHDPPHFKLILPDI--GQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAF--------SSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHD 260 S P H K L DI Q + + +W K EG + G +C++E + GME DDKGYLA+I VP G V + LAV V +E+ F + + Y A AS+ E DG LL+ L +L + G+ + + L++LAR D +LLRV+ SF EG FD EFF+E +V + Sbjct: 23 SKLPEHIKFRLMDIEFTQAIEGSKVIKWYKKEGQEVGPGGPLCDIETPELIFGMETDDKGYLAKIFVPEGADNVRPNQVLAVIVPQEEDIKPFLQALAENPTEIEEYKA------PASSSPIETASPTDGGDLLRVLSQLNKEGAFPSEGDYKLLKSLARKNDAELLRVYSGSFLIEGGTA---FDKEFFVENCLDLVEE 213
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|1214698378|gb|OWZ11413.1| (Dihydrolipoamide s-acetyltransferase [Phytophthora megakarya]) HSP 1 Score: 93.9745 bits (232), Expect = 3.933e-19 Identity = 71/232 (30.60%), Postives = 110/232 (47.41%), Query Frame = 0 Query: 41 RTLRREHSTAFIPTHRRLSTADGSGDNGTQSHD----PPHFKLILPD-----IGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQ--------YKDAFSSLPRYHAGGGGASEA---SAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLE 252 R L H+ + L ++DG + H P H K +PD +G + LT+W EG +K+G +CE++ +E D+G++AR+LV G V G+ LA+ V E KD S+ AG GA + SA G A V L+ ++KL + G D++ + L++LAR D+QLL ++AS+E +G E FD +FF+E Sbjct: 13 RRLTVAHTRKNVLLQTALFSSDGEAPPKEEEHKEVALPSHIKFRMPDLDFKEVGSGAGETTLTKWHVQEGAAVKDGTHMCEIDTPDLCFQLESGDEGFIARLLVNEGAHNVAPGQPLAIIVPTEAEIQLFVKVLKDNPRSIEGRSAGQVGAEDMVARSASTPTGNAASSDV--LRMINKLHKEGLFHDEKTLKVLKSLARKNDEQLLTTYKASYE-DGVLEEAAFDRDFFVE 241
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|1173945129|gb|OQR93795.1| (hypothetical protein THRCLA_08344 [Thraustotheca clavata]) HSP 1 Score: 92.0485 bits (227), Expect = 8.846e-19 Identity = 63/194 (32.47%), Postives = 91/194 (46.91%), Query Frame = 0 Query: 74 PPHFKLILPDI--GQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQ----YKDAFSSLP-RYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVVHD 260 P H K L DI Q + L +W K EGD + G +C++E + GME DD GYLA+I VP G V + L V V +E + A + P S + + DG LL+ L L + G+ ++ + L++LAR D +LLRV+ SF EG FD +FF+E +V + Sbjct: 25 PQHIKFRLMDIEFTQVMEGSKLVKWYKKEGDKVGPGGPLCDIETPELIFGMESDDVGYLAKIFVPEGAENVRPNQVLGVIVPKETDIPPFLQALAENPTEIEEYKTPTSSTQSTPVDPATVTDGSDLLRVLSHLNKEGAFSNESDYKVLKSLARKNDAELLRVYSGSFLAEGGAA---FDKDFFVENCLDLVEE 215
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|673031492|ref|XP_008869707.1| (hypothetical protein H310_06428 [Aphanomyces invadans] >gi|574474858|gb|ETW01859.1| hypothetical protein H310_06428 [Aphanomyces invadans]) HSP 1 Score: 92.0485 bits (227), Expect = 1.157e-18 Identity = 63/198 (31.82%), Postives = 98/198 (49.49%), Query Frame = 0 Query: 67 NGTQSHDPPHFKLIL--PDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQ----YKDAFSSLPRYHAGGGGASEASAGAEEGEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDLEFFLEEGRGVV 258 + S P H K+ + DI QT + L RW EGD I G +CEV+ + +E +D+GY+A+I VPA + V E LAV V E + +A + P ++ + A +E DG LL+ L L + G+ ++ + L++LAR D QLL V++ SF+ + FD +FF+E +V Sbjct: 24 HANSSKLPEHIKIRMLDMDITQTIEGSKLLRWFAKEGDKIGPGKPICEVDTPELLFSIESEDEGYIAKIFVPAQSERVRPNEVLAVIVPTESDIPPFLEALAEHPDEIEVHKPSTPSIATSE--STPTDGADLLRVLSHLNKEGAFPSEDVYKTLKSLARKNDDQLLLVYKGSFDEDN--TTSGFDKDFFIENCIDLV 217
BLAST of EWM29544.1 vs. NCBI_GenBank
Match: gi|325303684|tpg|DAA34353.1| (TPA_inf: dihydrolipoamide acetyltransferase [Amblyomma variegatum]) HSP 1 Score: 90.8929 bits (224), Expect = 1.250e-18 Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = 0 Query: 41 RTLRREHSTAFIPTHRRLSTADGSGDNGTQSHDPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAF 161 R + + S P H DG + P H ++ LP + T + G + W K EGD + GD++CE+E D+ +G E ++GYLA+IL+PAGT+ VP G+ L + VY+E AF Sbjct: 42 RLIAQSSSNLLKPRHH---FKDGQARRMYSADLPKHLRIQLPALSPTMEMGTIVSWEKKEGDRLGEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKDVPLGKLLCILVYDEGDVAAF 159 The following BLAST results are available for this feature:
BLAST of EWM29544.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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