EWM29511.1, cds1055 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|585112082|gb|EWM29511.1| (growth hormone-regulated tbc protein 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 1179.85 bits (3051), Expect = 0.000e+0 Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query: 1 GDVQAQDRRCRRLSTSYGPCPGVQSPGDLKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHTLAAASEEENLGLGVIGGEEGEEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWEGGAGSGTGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCRAPQQARWRWRHRGAAGEGRQDEGNKSKGGDAPGRSHAGTTEADMRDGRSMNGWVYGSNESDRENLAQQNEQKMRRLMRRSVTRGLSLIGLSYWVSPHTWRHWDQLAFQVTHRLFLEEGRFRSMRFTPVLVDLVSWWMNWPILMRRTGGGDLPAPAPTSPVRRSSLGPSVAGSPPRVASNRRHSSSPIKI 582
GDVQAQDRRCRRLSTSYGPCPGVQSPGDLKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHTLAAASEEENLGLGVIGGEEGEEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWEGGAGSGTGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCRAPQQARWRWRHRGAAGEGRQDEGNKSKGGDAPGRSHAGTTEADMRDGRSMNGWVYGSNESDRENLAQQNEQKMRRLMRRSVTRGLSLIGLSYWVSPHTWRHWDQLAFQVTHRLFLEEGRFRSMRFTPVLVDLVSWWMNWPILMRRTGGGDLPAPAPTSPVRRSSLGPSVAGSPPRVASNRRHSSSPIKI
Sbjct: 1 GDVQAQDRRCRRLSTSYGPCPGVQSPGDLKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHTLAAASEEENLGLGVIGGEEGEEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWEGGAGSGTGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCRAPQQARWRWRHRGAAGEGRQDEGNKSKGGDAPGRSHAGTTEADMRDGRSMNGWVYGSNESDRENLAQQNEQKMRRLMRRSVTRGLSLIGLSYWVSPHTWRHWDQLAFQVTHRLFLEEGRFRSMRFTPVLVDLVSWWMNWPILMRRTGGGDLPAPAPTSPVRRSSLGPSVAGSPPRVASNRRHSSSPIKI 582
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|553194349|ref|XP_005855935.1| (gtpase activator nb4s calmodulin-binding protein pollux, partial [Nannochloropsis gaditana CCMP526] >gi|422293125|gb|EKU20425.1| gtpase activator nb4s calmodulin-binding protein pollux, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 290.812 bits (743), Expect = 5.479e-93 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 251 DMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCR 393
DMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCR
Sbjct: 1 DMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCR 143
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|1214712831|gb|OWZ23752.1| (hypothetical protein PHMEG_0001319 [Phytophthora megakarya]) HSP 1 Score: 161.384 bits (407), Expect = 7.430e-39 Identity = 92/271 (33.95%), Postives = 136/271 (50.18%), Query Frame = 0
Query: 163 QDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLM--KHEDEMDR------------VLCRAPQQARW-----RWRHRGAAGEGRQD 414
+ IELD+ R F S I++ GR +LRR+LRAY+LRNPSVGYCQG+NFI +L EE FW L+ CE++ P +SP + + DM L +L+ +LP L E + + L LE++ WLL F FP RIL+ EGS F V +A LR LE LL D+ H++ ++ + D+D + + + + + R HL ++ EM+R V+ + P + + R+ H A G R D
Sbjct: 352 RQIELDIDRTFGHSGTTISSQAGRDQLRRILRAYSLRNPSVGYCQGLNFIVAFFMLMADEEVVFWLLSVFCEDLYPGYYSPAMGDIQRDMLVLKQLIAEDLPQLDEFTAEVGLPLELLGSQWLLCLFTTTFPSETVFRILDCIFTEGSSFVFPVIMAHLRRLEPTLLGLDEFHDVLSSIKEAENACIDSDLFM----AAVYKEAETVTVARVQHLREVQCGSVRSEMERAERARAFNQQLAVIYQIPAFSNYAAGLLRYFHEEAEGSSRSD 618
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|695376275|ref|XP_009515745.1| (hypothetical protein PHYSODRAFT_467548 [Phytophthora sojae] >gi|348688656|gb|EGZ28470.1| hypothetical protein PHYSODRAFT_467548 [Phytophthora sojae]) HSP 1 Score: 160.614 bits (405), Expect = 1.711e-38 Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = 0
Query: 165 IELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALL 355
IELD+ R F S I + GR +LRR+LRAY+LRNPSVGYCQG+NFI LL EE FW L+ CE++ P +SP + + DMR L +L+ ELP L + + + L LE++ WLL F FP RI + EGS F V + LR LE LL D+ H + ++ ++ D D +
Sbjct: 371 IELDIDRTFGHSGTTICSEAGRGQLRRILRAYSLRNPSVGYCQGLNFIVAFFLLMADEEVVFWLLSVFCEDLYPGYYSPAMADIQRDMRVLKQLIAEELPQLDDFTAEVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSYFVFPVIMTHLRKLEPTLLDLDEFHRVLSSIKDAESVCIDGDLFM 561
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|566020887|gb|ETI43798.1| (hypothetical protein F443_11393 [Phytophthora parasitica P1569] >gi|567958271|gb|ETK83863.1| hypothetical protein L915_11083 [Phytophthora parasitica] >gi|567986963|gb|ETL37278.1| hypothetical protein L916_10981 [Phytophthora parasitica] >gi|568016240|gb|ETL90417.1| hypothetical protein L917_10889 [Phytophthora parasitica] >gi|568046617|gb|ETM43722.1| hypothetical protein L914_10916 [Phytophthora parasitica] >gi|570324526|gb|ETO72474.1| hypothetical protein F444_11463 [Phytophthora parasitica P1976] >gi|570948352|gb|ETP13609.1| hypothetical protein F441_11310 [Phytophthora parasitica CJ01A1] >gi|570981198|gb|ETP41672.1| hypothetical protein F442_11278 [Phytophthora parasitica P10297] >gi|970658678|gb|KUF96416.1| DNA replication licensing factor MCM3 [Phytophthora nicotianae]) HSP 1 Score: 157.147 bits (396), Expect = 2.816e-37 Identity = 90/267 (33.71%), Postives = 134/267 (50.19%), Query Frame = 0
Query: 163 QDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMR-SNLRILRAWHLGDLMKHEDEMDR---------VLCRAPQQARW-----RWRHRGAAGEGRQD 414
+ IELD+ R F S I + GR +LRR+LRAY+LRNPSVGYCQG+NFI L+L EE FW L+ CE++ P +SP + + DM L +L+ ELP L E + + L LE++ WLL F FP RI + EGS F V +A LR +E LL + H++ ++ ++ D+D + + + S ++ LR G + + +R V+ + P + + R+ H A G R D
Sbjct: 366 RQIELDIDRTFGHSGTTICSVSGRDQLRRILRAYSLRNPSVGYCQGLNFIVAFLMLMADEEVIFWLLSVFCEDLYPGYYSPAMSDIQRDMLVLKQLIAEELPQLDEFAAEVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSAFVFPVIMAHLRRMEPILLDLVEFHDVLSSIKDAESACIDSDLFMTAVCKEAESITASRVQKLREQQCGSVRSEMERAERARAFNQQLAVVYQIPAFSTYAAGLLRFFHEEAEGSSRSD 632
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|675197067|ref|XP_008907418.1| (hypothetical protein PPTG_13469 [Phytophthora parasitica INRA-310] >gi|568092233|gb|ETN07042.1| hypothetical protein PPTG_13469 [Phytophthora parasitica INRA-310]) HSP 1 Score: 155.992 bits (393), Expect = 5.989e-37 Identity = 90/267 (33.71%), Postives = 134/267 (50.19%), Query Frame = 0
Query: 163 QDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMR-SNLRILRAWHLGDLMKHEDEMDR---------VLCRAPQQARW-----RWRHRGAAGEGRQD 414
+ IELD+ R F S I + GR +LRR+LRAY+LRNPSVGYCQG+NFI L+L EE FW L+ CE++ P +SP + + DM L +L+ ELP L E + + L LE++ WLL F FP RI + EGS F V +A LR +E LL + H++ ++ ++ D+D + + + S ++ LR G + + +R V+ + P + + R+ H A G R D
Sbjct: 366 RQIELDIDRTFGHSGTTICSVSGRDQLRRILRAYSLRNPSVGYCQGLNFIVAFLMLMADEEVIFWLLSVFCEDLYPGYYSPAMSDIQRDMLVLKQLIAEELPQLDEFAAEVGLPLELLGSQWLLCLFTMTFPSETVFRIFDCIFTEGSAFVFPVIMAHLRRMEPILLDLVEFHDVLSSIKDAESACIDSDLFMTAVCKEAESITASRVQKLREQQCGSVRSEMERAERARAFNQQLAVVYQIPAFSTYAAGLLRFFHEEAEGSSRSD 632
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|301117904|ref|XP_002906680.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108029|gb|EEY66081.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 156.377 bits (394), Expect = 8.361e-37 Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 0
Query: 131 GYVGRRGAGGKGGMVVDVVMPEL---DAAWGAKVAQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALL 355
YV GAG K EL + + IELD+ R F S + + GR +LRR+L+AY+LRNPSVGYCQG+NFI L+L EE FW L+ CE++ P +SP + + DM L +L+ ELP L E + L LE++ WLL F FP RI + EGS F V +A LR +E +LL + H++ ++ ++ D D +
Sbjct: 388 AYVNLSGAGEKQANAGPSYYAELVKKAETMETETFRQIELDIDRTFGHSGTKLCSESGRDQLRRILQAYSLRNPSVGYCQGLNFIVAFLMLIADEEVVFWLLSVFCEDLYPGYYSPAMSDIQRDMLVLKQLIAEELPQLDEFALDVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSSFVFPVIMAHLRRMEPKLLDLVEFHDVLSSIKDTESACIDGDLFM 615
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|970616767|gb|KUF64913.1| (Growth hormone-regulated TBC protein 1 [Phytophthora nicotianae]) HSP 1 Score: 155.221 bits (391), Expect = 4.529e-36 Identity = 90/265 (33.96%), Postives = 133/265 (50.19%), Query Frame = 0
Query: 165 IELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMR-SNLRILRAWHLGDLMKHEDEMDR---------VLCRAPQQARW-----RWRHRGAAGEGRQD 414
IELD+ R F S I + GR +LRR+LRAY+LRNPSVGYCQG+NFI L+L EE FW L+ CE++ P +SP + + DM L +L+ ELP L E + + L LE++ WLL F FP RI + EGS F V +A LR +E LL + H++ ++ ++ D+D + + + S ++ LR G + + +R V+ + P + + R+ H A G R D
Sbjct: 1055 IELDIDRTFGHSGTTICSVSGRDQLRRILRAYSLRNPSVGYCQGLNFIVAFLMLMADEEVIFWLLSVFCEDLYPGYYSPAMSDIQRDMLVLKQLIAEELPQLDEFAAEVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSAFVFPVIMAHLRRMEPILLDLVEFHDVLSSIKDAESACIDSDLFMTAVCKEAESITASRVQKLREQQCGSVRSEMERAERARAFNQQLAVVYQIPAFSTYAAGLLRFFHEEAEGSSRSD 1319
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|953486261|emb|CEG49592.1| (tbc domain-containing protein [Plasmopara halstedii]) HSP 1 Score: 151.369 bits (381), Expect = 2.644e-35 Identity = 74/191 (38.74%), Postives = 104/191 (54.45%), Query Frame = 0
Query: 165 IELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALL 355
IELD+ R F +S I++ GR+RLRR+L+AY+LRNP VGYCQG+NFI LLL EE FW L+ CE++ P + + G + DM + +L+ ELP L + L LE++ WLL F FP RI + EGS F V +A LR LE LL + ++ ++ + D D +
Sbjct: 366 IELDINRTFGNSGTTISSESGRSRLRRILQAYSLRNPRVGYCQGLNFIVAFLLLMADEENVFWLLSVFCEDLYPDFYCQTMCGVQRDMLVMKKLVAEELPLLDNFALDMGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSYFAFPVIMAHLRHLEPTLLGLHEFQDVLSSIKNAECTCIDGDLFM 556
BLAST of EWM29511.1 vs. NCBI_GenBank
Match: gi|1160561641|ref|XP_020430874.1| (hypothetical protein PPL_08211 [Polysphondylium pallidum PN500] >gi|281204555|gb|EFA78750.1| hypothetical protein PPL_08211 [Polysphondylium pallidum PN500]) HSP 1 Score: 148.673 bits (374), Expect = 9.146e-34 Identity = 78/196 (39.80%), Postives = 110/196 (56.12%), Query Frame = 0
Query: 162 AQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPL-CFSPPLLGTRADMR-ALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALL 355
+ I +D+ R F D +NT E L RVL AY+ RNP VGYCQ MNFI G LLL +SE A+WTL + E++ P F+ ++ D+R E+L+ +LP L++H + L L+L ++ W L P RI ++ AEGS V F A+A + E +LL C D + L L+R + MYDADAL+
Sbjct: 1314 TKQIAMDIDRTFPDH-KYLNTQEHMETLSRVLTAYSWRNPKVGYCQCMNFIVGYLLLHMSEHEAYWTLVSIIEDILPSEYFTSTMIDLSVDVRFVFDEILQKKLPKLHKHFTTLNLSLPLIMTQWFLCIMATATPTETTFRIWDVFFAEGSKVLFRFAVALFKMNEEKLLTCKDYNTLYNLIRKIPSMMYDADALI 1508 The following BLAST results are available for this feature:
BLAST of EWM29511.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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