EWM29636.1, cds1047 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|585112208|gb|EWM29636.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 1357.81 bits (3513), Expect = 0.000e+0 Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 Query: 1 MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR 653 MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR Sbjct: 1 MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR 653
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1210524983|dbj|GAX16175.1| (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris]) HSP 1 Score: 474.937 bits (1221), Expect = 6.948e-157 Identity = 259/639 (40.53%), Postives = 363/639 (56.81%), Query Frame = 0 Query: 20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG---------RTRSANSGADGVPDASTDPLQDGEEETPPPP--------------PLDYLTADT----------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599 W L++R DRPVEGC++ PHAY+Y G+K +RD ++ + YRW RGP CA CPR SF P WSK A G +QCV + + ++FC CF +AWK + + R+RS ++G+ + D + P P +L T S DDW E+ ++ Y P D+GR LKLE + D R+ +T+ VL+ P P +R L+ K A + G +FR+ +YN+LAEIYATQ YPYCD W L+W+YR N+LRE+ + A +V+ LQE+QADHYE + +S+ G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+ ++ F+ R+ KDN+AQ VVLE + + +C+ANTHLYS+ +FPDVKLWQ QLLQ LE + SN+PLV+CGDFNS P +AVY+L+S Q V HPD+ + A+S + ++ + + HS L SAY T+LG+EP TNYTV + G LDYIW+S + RPL+ AP+P E+ L GEALP+ + SDH+ML SD+Q ++GGG Sbjct: 10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSYRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSNCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYYAQNEINNNHGTPRGFLGGYTGSNHNPYNNNPAGDFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM------ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQ-IIGGG 628
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1210531048|dbj|GAX10149.1| (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris]) HSP 1 Score: 473.396 bits (1217), Expect = 3.022e-156 Identity = 258/639 (40.38%), Postives = 363/639 (56.81%), Query Frame = 0 Query: 20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG---------RTRSANSGADGVPDASTDPLQDGEEETPPPP--------------PLDYLTADT----------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599 W L++R DRPVEGC++ PHAY+Y G+K +RD ++ + +RW RGP CA CPR SF P WSK A G +QCV + + ++FC CF +AWK + + R+RS ++G+ + D + P P +L T S DDW E+ ++ Y P D+GR LKLE + D R+ +T+ VL+ P P +R L+ K A + G +FR+ +YN+LAEIYATQ YPYCD W L+W+YR N+LRE+ + A +V+ LQE+QADHYE + +S+ G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+ ++ F+ R+ KDN+AQ VVLE + + +C+ANTHLYS+ +FPDVKLWQ QLLQ LE + SN+PLV+CGDFNS P +AVY+L+S Q V HPD+ + A+S + ++ + + HS L SAY T+LG+EP TNYTV + G LDYIW+S + RPL+ AP+P E+ L GEALP+ + SDH+ML SD+Q ++GGG Sbjct: 10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSFRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSDCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYHAQNEINNNHGTPRGFLGGYTGSSHNPYNNNPAGEFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRNKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM------ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQ-IIGGG 628
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|219109505|ref|XP_002176507.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411042|gb|EEC50970.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 467.618 bits (1202), Expect = 4.379e-154 Identity = 266/639 (41.63%), Postives = 360/639 (56.34%), Query Frame = 0 Query: 17 LGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKE--------------RFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNH-------KRIHQMGRTRSANSGADG--VPDAS--------TDPLQDGEEETPPPPPLDYLTADTSE-------------------DDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGG 600 L W L++R DRPVEGC + PHAY+Y G+K +R+ + + + YRW R P CA CPR SF+P WS+ A G +QCV FC CF +AWK R GRTRS + G++ V D + + P D PP P +L+ ++ DDW E ++ Y P D+G LK+E + D S R+ +T+ VL P P +R L+ K +FR+ TYN+LAEIYATQ YPYCD W L+W+YR N+LRE+ + + +V+ LQE+QADHYE + +++ G++G+YK KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+ ++ FL R+ KDNVAQ VVLE + R R S VC+ANTHLYS+ +FPDVKLWQ QLLQ LE + +N+PL++CGDFNS P +AVY+L+S Q V HPD+ + + V +VL + + HS L SAY T+LGEEP TN+TV + GVLDYIW+S + RPL+ APIP E+ L GEALP+ Y SDH+ML SD+Q ++G G Sbjct: 7 LYSWHLSLRADRPVEGCGMRPHAYMY--GKKLDEREDKTLPPHSKKMKEPPPQHEFSYRWFRSPLHEPCAYENCPRRTSFSPHDWSRHALGGTECGLQCVSTQSSLF---RCTFCNSTCFVNAWKTQYSVPKEATRTETHGRTRSQSFGSNDEDVFDDTGSVRSSNGSSPALDTLSSPPPSTPRGFLSGYSAGKQLNPASGSSMYHSEYDAGDDWVEFSRDQLYMPGPEDVGHKLKIEAAAYSTDTSELLMSRVVKTDVVLGRAPDPLKRQLVTTKGGGGGGP--RFRVITYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREIIDASPEVVCLQEIQADHYENHVYVAMADAGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGVAFLNRLSKDNVAQLVVLEFIQPSRSNRE-ISQVCIANTHLYSNKDFPDVKLWQTWQLLQELESFIMSRGTNLPLIICGDFNSTPDTAVYDLLSRQTVHPGHPDVNVT----------TGDDVPNVLPDAMN--ITHSFQLGSAYQTVLGEEPWTTNFTVNFKGVLDYIWYSAQNLRPLSAAPIPEEKQLTKNGEALPSTEYSSDHIMLISDMQ-IIGNGA 624
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|397615906|gb|EJK63707.1| (hypothetical protein THAOC_15625 [Thalassiosira oceanica]) HSP 1 Score: 453.751 bits (1166), Expect = 4.319e-149 Identity = 250/609 (41.05%), Postives = 344/609 (56.49%), Query Frame = 0 Query: 20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKE--------------RFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFL-IQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG----------RTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE---LGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGG 598 W L++R+DRPVEGC + PHAY+Y G+K R+ + YRW +GP CA CPR SF+P WS ++ G L +QC+ ++ L R + FC QCF AWK + + R A S D DA ++ G P Y E +W E+ Y P+ D+GR LKLE + D R+ +T+ VLS P P +R + +A G +FR+ATYNILAEIYATQ YPY D W+L+W++R N++RE+ +VA D++ LQEVQADHYE + + + GY+G+YK KTR++MG +GKVDGCA+ WRR KF L+E Y +EFN+ A+RQ ++ L ++ L ++ KDNVAQ VVLE+ R R + VC+ANTHLYS+ + PDVKLWQ LLQ LE + +N+PL++CGDFNS P SAVY+L+S Q V HPD+ + ++ +A + HS +L S Y +LGEEPR+TNYT + GVLDY+W++ + RPL+ A +P E + GEALPN Y SDH+M SD+Q V GG Sbjct: 10 WHLSLRVDRPVEGCTLRPHAYMY--GKKLDDREANGNHAHSKICREPPPNHEFSYRWFKGPPVDPCAYDECPRRSSFSPHDWSTYSLGGTGVLSLQCI-SSQSSLYR--ATFCNPQCFVQAWKTQFTLDRGADEPQARCSTPNRRRAGSYNDLDDDAREVTIEGGSSGPSTPANTAY------EQEWTEISHGEMYVPRPEDVGRKLKLEAAAYSSDSGELLMHRVVKTDLVLSRTPEPDKRNFITKSAAPGSAGGARFRVATYNILAEIYATQQQYPYADLWSLSWDFRFQNIIREIIDVAPDIVCLQEVQADHYESHLYNAMHDAGYEGVYKQKTRQAMGLTGKVDGCALFWRRTKFHLSESYSIEFNELAQRQVTQGMGLHARSEEGANLLNKLSKDNVAQLVVLELAQATRNDRL-NNQVCIANTHLYSNKDCPDVKLWQTLHLLQELETFVMARGTNLPLMICGDFNSTPDSAVYDLLSRQTVHPGHPDVNIPEEHGPNVLPDAM-------------NITHSHMLGSVYNAVLGEEPRYTNYTSQFRGVLDYMWYTTQNLRPLSAATVPDEGVILRHGEALPNTQYSSDHIMQISDMQIVSGG 593
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1072232083|gb|OEU16815.1| (Exo_endo_phos-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 452.981 bits (1164), Expect = 4.350e-148 Identity = 264/650 (40.62%), Postives = 357/650 (54.92%), Query Frame = 0 Query: 20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQ-----------MGRTRSANSGADGVPDA----STDPLQDGEEETPPP----------PP-------------------LDYLTAD--TSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRP----RGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599 W L++R+DRPVEGC + PH Y+Y G+K +RD ++ + YRW RGP CA C R SF+P WSK A G +QCV FC CF +AWK + + RT S +S D + S+D + G P PP Y + E++W EV E+ Y P DIGR LKLE + + R+ +T+ VL+ P P +R L+ KN A A +G +FRI +YN+LAEIYATQ YPYCD W L+W YR N++RE+ + A DV+ LQEVQADHYE I +SE+G++G+YK KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+ ++ FL R+ KDN+AQ VVLE L P R R + VC+ANTHLYS+ EFPDVKLWQ QLLQ LE + +++PL++CGDFNS P SAVY+L+ Q V HPD+ + + + ++ + + HS L S Y ++LGEEP+ TNYT+ + GVLDYI +S RPL+ +P+P E L G+ALP+ + SDH+ML SD+Q + GG Sbjct: 10 WHLSLRVDRPVEGCNMKPHCYMY--GKKLDERDVDKPLPSHSKKMREPPPEHEFSYRWFRGPRSEPCAYEGCTRRTSFSPHDWSKHAIGGSGCGLQCVSTQSSLF---KCTFCNSNCFVEAWKTQYTVPKDMQRPSRGTPMRKRTGSVDSMEDDLRSVGSVGSSDRINGGGGAKSPANFSEASGSSGPPGTPRGYLGGYNGGGAPGSAGPYKNGNHPQKEEEWIEVSREQFYVPGQDDIGRRLKLEAAAYSSETGELLMHRVVKTDLVLARAPDPVKRSLVTAKNGAGAGSGARFRIVSYNVLAEIYATQQQYPYCDIWALSWEYRFHNIMREIVDAAPDVICLQEVQADHYEDHIYAAMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGLNPRSEEGTNFLNRLSKDNIAQLVVLE-LASPQLATRTNRDPINQVCIANTHLYSNKEFPDVKLWQAWQLLQELENFAMSRGTSLPLMICGDFNSSPDSAVYDLLMRQNVHPGHPDVNI------NTGDDCPNVLPDAM------NITHSFQLGSTYQSVLGEEPQQTNYTLNFKGVLDYICYSVQTLRPLSASPVPDESVLTRHGDALPSTEFSSDHIMLISDMQILNGGA 641
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|298713364|emb|CBJ33581.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 433.721 bits (1114), Expect = 6.912e-142 Identity = 229/466 (49.14%), Postives = 298/466 (63.95%), Query Frame = 0 Query: 22 LNVRLDRPVEGCLISPHAYLYQK-----GEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSA-NSGADGVPDAS----------------------TDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASEL-GLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGR--HGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVL 456 L++RLDRP+EGC + P Y+Y K G + ++Y W RGPER VCAN +CPRA SF+P++WSK+A +G IQCV C KLR+PRH SVFC + CF++AW++H++ H+ R + A +G + P AS D L+ EEE P ++ D E++W ++ ++ Y P+ D+G CL+LE R + P G PR+ TEPVLS PP PP+R L+ VK + + +FR+ +YN+LAEIYATQ YPYCD W L+W YRK NLLRE+ E ADVL LQEVQ+D Y+Q P LSE+GYDGLYK KTRE GA GKVDGCAI WRR KFRL+E Y + FN+CARR + + GL ++ H FL RV KDNVAQ VLEVL RPRG + + +C+ANTHLYS+PE PDVKLWQC+ LLQ LEG +PL++ Sbjct: 57 LSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTR--IQCVPCHKLRVPRHRSVFCNVTCFKEAWQSHRQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGAGGEGEGGEDLLKPEEEEDVP---INAQVMD-EEEEWTKISADSLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGV-RFRLCSYNLLAEIYATQQAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEGHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPAAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLV 513
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|224011515|ref|XP_002295532.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209583563|gb|ACI64249.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 416.772 bits (1070), Expect = 9.944e-135 Identity = 231/573 (40.31%), Postives = 327/573 (57.07%), Query Frame = 0 Query: 58 YRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIH-QMGRTRSAN-------SGADGVPDASTDPLQDGEEETPPPPPLDYLT----ADT-------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGR--PRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGG 598 + YRW RGP CA CPR SF+P WSK A G +QCV + + + FC CF AWK + + + RS+ S AD S + + G + PP +T A+T ++W E+ ++ Y P +D+GR LKLE D R+ +T+ VLS +R + K + G +FRI TYNILAEIYATQ YP+ D W+L+W++R N++RE+ +V D++ LQEVQADHYE + + + G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQ ++ +GL+ ++ L+++ KDNVAQ VVLE+ + R R + VC+ANTHLYS+ ++PDVKLWQ LLQ LE + +N+PL++CGDFNS P +AVY+L+S Q V HPD+ L ++ ++ + HS +L S Y T+LGEEP+FTNYT+ + GVLDY+W+S + RPL+ APIP E L G+ALP+ Y SDH+M SD+Q V G Sbjct: 33 FSYRWFRGPTVEPCAYEGCPRRTSFSPHDWSKHALGGSGCSLQCV---STQSSLYKATFCNANCFVKAWKTQYTVQSDVPQARSSTPQRRRLGSYADDDDTRSVNSVNSGRSDYNPPGTPREITVGGNANTPRGNNGGYNDHHGQSEEWIEISRDQLYVPNENDVGRKLKLEAAAYAIDSGELLMHRVVKTDLVLSRTSELDKRNFITSK--PSGGGGARFRIVTYNILAEIYATQQQYPHADLWSLSWDFRFQNIIREIVDVGPDIVCLQEVQADHYESHLYNAMHDAGFEGVFKQKTRQSMGMTGKVDGCALFWRRTKFHLIESYSIEFNELAQRQVTQVMGLNPRSEEGAAILSKLSKDNVAQLVVLELAQQSISRSSREPINQVCIANTHLYSNKDYPDVKLWQTLHLLQELETFIMARGTNLPLMICGDFNSTPDTAVYDLLSRQAVHPGHPDVNL-------GDDNGPNVLPDIM------NITHSHMLGSVYNTVLGEEPKFTNYTMQFKGVLDYMWYSTQNLRPLSAAPIPDESVLTRYGDALPSTQYSSDHIMQISDMQIVSVG 587
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|676390671|ref|XP_009038613.1| (hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens] >gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens]) HSP 1 Score: 394.815 bits (1013), Expect = 1.242e-126 Identity = 233/584 (39.90%), Postives = 315/584 (53.94%), Query Frame = 0 Query: 22 LNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPR---AQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSAN--SGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERT-YCPQLSDIGRCLKLEIRVLNPDG--SLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPS--NMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFV 595 + +R RPVEGC + P L G ++ R+RWLR R V AN ACP A ++P+ + R+G + +QC +C K + FC+ CF +AW H+R H R+R+ S A G + D + +E +L+ D S W+ V + P S++GR L++E + P G + T+ VL AP P R + + R+A+YNILAEIYAT YPYC+ W L W YR +++E+ + ADV+ LQE Q DH+E+D+ P + GY+GL+ K+RE+MGA+GKVDGCA+ W+ K+R+AE+ + FND A +A LS +H +LTR++KDNVAQ VVLE P H + MANTHLYSH +FPD KLWQ LL+ LE S +PLVL GD NS P S+VYEL+S Q + HPD+ Q A V + Q++H L L SAYAT+ G EP FTNYT+G+ G LDYIWF R VA IP L G+ALPN YPSDH ML +D F+ Sbjct: 10 VKIRAGRPVEGCALRPQGVLRSSGPH-----EDGVELRWRWLRS--RDVVANCACPSCDFAHDYDPVNRN---RRGVA--LQCAICLKEQRAPETLTFCSAVCFVEAWPEHRRCHNHARSRAGTMESAASGDKGSFGDLARKDDEP-------HWLSDDASL--WEIVAENVAEFVPSESEVGRRLRIECYAVRPTGREEQLRARGVAHTDAVLGAPMAPLPRSFI---GESTEGVDPSLRVASYNILAEIYATAHAYPYCERWALEWQYRARVVIQELIDTNADVICLQEAQRDHFERDVEPAMKSAGYEGLFTQKSREAMGAAGKVDGCAMFWKTTKYRVAEQRNVSFNDLAYAEAQNANLSERDEHAYLTRLVKDNVAQLVVLEDYPAP---GHRSRRLAMANTHLYSHKDFPDTKLWQSLCLLRALESFANRSRETLPLVLAGDLNSGPDSSVYELISTQAINPRHPDLAPRVGQFGA-----------VNVLPDARQISHRLPLGSAYATVAGAEPEFTNYTMGFRGTLDYIWFDQTMLRCAAVATIPTVDALTRAGDALPNPQYPSDHTMLIADFLFL 555
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1173929721|gb|OQR82903.1| (carbon catabolite repressor protein [Achlya hypogyna]) HSP 1 Score: 400.593 bits (1028), Expect = 1.051e-119 Identity = 220/601 (36.61%), Postives = 327/601 (54.41%), Query Frame = 0 Query: 13 GTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQ-VKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASEL---------GLSHDQKHTFLT-------RVLKDNVAQAVVLEVLGRPRGGRHGGSM---VCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPI-PAEQDLACTGEALPNALYPSDHLMLFSDL 592 G+ G +++R+D+PVEGC ++ HA+ Y+ E D + F+ ++ W + CAN CPR + A+ I+C VC+++ + S FCT +CF+ W NH+++H N D S +E+ L+ ++ W + + +TY P +D+G L++E + G P+ TET VL PP P+RP++ +K+ A FR+ +YN+LAEIYAT+ MYPYC W LNW++RK L RE++ AD+L LQEVQADHY+ LP +++ GYDGLY KTRESMG GKVDGCA+ +R+ +F L E+Y +EFN+ A + L SH ++ + R+++DNVAQ VVL+VL P G + +C+ N H++S+PEFPDVKLWQ + LLQ +E + +P+++CGDFNSEP SAVYEL+S VG+DHP+++ L + + AH++ SAYA++ G EP +TNYT +VGV+DYIWF+ P+ + P E A LPN + SDH+ + D Sbjct: 15 GSPTSGEGRISLRVDQPVEGCEVTTHAF-YRSSEGDI--DDDDFHLKFFWYKSSTTRACANKQCPRVGTGEGNIVMLMAK------IECAVCSRMGIANESSGFCTPECFRSGWGNHRQLHDHAAKHPNNQKNRNATDVSA-----AKEKAHSLDLLNAAMVPVKDESWIALQASKTYIPTSADVGHVLRVECTAMLRSGEECGPPKFTETNIVLPFPPLAPKRPMISSIKDTARVRYIGSFRVLSYNVLAEIYATRQMYPYCPMWALNWSFRKQLLKRELQLYNADILCLQEVQADHYKSFFLPMMTDLGYDGLYLQKTRESMGLVGKVDGCAMFYRKNRFYLKEQYSLEFNEAANDFVASLLASFDMAYPAASHHERDAYQASLARVRQRLVRDNVAQIVVLDVLPEPASGLARKPVLPSICVTNVHIFSNPEFPDVKLWQTNTLLQQMEQIANSRRLPIIVCGDFNSEPPSAVYELLSQNHVGSDHPELKTLADVVPMT------------------KFAHAMPFASAYASVFGTEPDYTNYTGSWVGVVDYIWFTSDKLTPVAALQVHPPEVLKAYARTCLPNCQFVSDHVPVVVDF 583 The following BLAST results are available for this feature:
BLAST of EWM29636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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