EWM29636.1, cds1047 (CDS) Nannochloropsis gaditana

Overview
NameEWM29636.1
Unique Namecds1047
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1043062..1044130 -
Alignment locationCM002456.1:1041938..1042830 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29636.1
ProductEndonuclease/exonuclease/phosphatase
Orig transcript idgnl|cribi|Naga_100050g9.6859.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1043062..1044130 -
CM002456.1supercontigCM002456.1:1041938..1042830 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|585112208|gb|EWM29636.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 1357.81 bits (3513), Expect = 0.000e+0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0
Query:    1 MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR 653
            MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR
Sbjct:    1 MSGTTASSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGGGGGGGGGLGGGLMGELRKAMPGLGGGLGGYMTPTKQQQQQLTSSPSLTRKGVR 653          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1210524983|dbj|GAX16175.1| (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris])

HSP 1 Score: 474.937 bits (1221), Expect = 6.948e-157
Identity = 259/639 (40.53%), Postives = 363/639 (56.81%), Query Frame = 0
Query:   20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG---------RTRSANSGADGVPDASTDPLQDGEEETPPPP--------------PLDYLTADT----------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599
            W L++R DRPVEGC++ PHAY+Y  G+K  +RD ++                 + YRW RGP    CA   CPR  SF P  WSK A  G    +QCV     +   + ++FC   CF +AWK    + +           R+RS ++G+      + D  +         P              P  +L   T                S DDW E+  ++ Y P   D+GR LKLE    + D       R+ +T+ VL+  P P +R L+  K  A +  G +FR+ +YN+LAEIYATQ  YPYCD W L+W+YR  N+LRE+ + A +V+ LQE+QADHYE  +   +S+ G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+   ++   F+ R+ KDN+AQ VVLE +          + +C+ANTHLYS+ +FPDVKLWQ  QLLQ LE   +   SN+PLV+CGDFNS P +AVY+L+S Q V   HPD+ +      A+S +   ++   +       + HS  L SAY T+LG+EP  TNYTV + G LDYIW+S  + RPL+ AP+P E+ L   GEALP+  + SDH+ML SD+Q ++GGG
Sbjct:   10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSYRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSNCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYYAQNEINNNHGTPRGFLGGYTGSNHNPYNNNPAGDFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM------ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQ-IIGGG 628          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1210531048|dbj|GAX10149.1| (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris])

HSP 1 Score: 473.396 bits (1217), Expect = 3.022e-156
Identity = 258/639 (40.38%), Postives = 363/639 (56.81%), Query Frame = 0
Query:   20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG---------RTRSANSGADGVPDASTDPLQDGEEETPPPP--------------PLDYLTADT----------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599
            W L++R DRPVEGC++ PHAY+Y  G+K  +RD ++                 + +RW RGP    CA   CPR  SF P  WSK A  G    +QCV     +   + ++FC   CF +AWK    + +           R+RS ++G+      + D  +         P              P  +L   T                S DDW E+  ++ Y P   D+GR LKLE    + D       R+ +T+ VL+  P P +R L+  K  A +  G +FR+ +YN+LAEIYATQ  YPYCD W L+W+YR  N+LRE+ + A +V+ LQE+QADHYE  +   +S+ G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+   ++   F+ R+ KDN+AQ VVLE +          + +C+ANTHLYS+ +FPDVKLWQ  QLLQ LE   +   SN+PLV+CGDFNS P +AVY+L+S Q V   HPD+ +      A+S +   ++   +       + HS  L SAY T+LG+EP  TNYTV + G LDYIW+S  + RPL+ AP+P E+ L   GEALP+  + SDH+ML SD+Q ++GGG
Sbjct:   10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSFRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSDCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYHAQNEINNNHGTPRGFLGGYTGSSHNPYNNNPAGEFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRNKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM------ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQ-IIGGG 628          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|219109505|ref|XP_002176507.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411042|gb|EEC50970.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 467.618 bits (1202), Expect = 4.379e-154
Identity = 266/639 (41.63%), Postives = 360/639 (56.34%), Query Frame = 0
Query:   17 LGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKE--------------RFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNH-------KRIHQMGRTRSANSGADG--VPDAS--------TDPLQDGEEETPPPPPLDYLTADTSE-------------------DDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGGG 600
            L  W L++R DRPVEGC + PHAY+Y  G+K  +R+ +              +  + YRW R P    CA   CPR  SF+P  WS+ A  G    +QCV             FC   CF +AWK          R    GRTRS + G++   V D +        + P  D     PP  P  +L+  ++                    DDW E   ++ Y P   D+G  LK+E    + D S     R+ +T+ VL   P P +R L+  K         +FR+ TYN+LAEIYATQ  YPYCD W L+W+YR  N+LRE+ + + +V+ LQE+QADHYE  +   +++ G++G+YK KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+   ++   FL R+ KDNVAQ VVLE +   R  R   S VC+ANTHLYS+ +FPDVKLWQ  QLLQ LE   +   +N+PL++CGDFNS P +AVY+L+S Q V   HPD+ +             + V +VL    +  + HS  L SAY T+LGEEP  TN+TV + GVLDYIW+S  + RPL+ APIP E+ L   GEALP+  Y SDH+ML SD+Q ++G G 
Sbjct:    7 LYSWHLSLRADRPVEGCGMRPHAYMY--GKKLDEREDKTLPPHSKKMKEPPPQHEFSYRWFRSPLHEPCAYENCPRRTSFSPHDWSRHALGGTECGLQCVSTQSSLF---RCTFCNSTCFVNAWKTQYSVPKEATRTETHGRTRSQSFGSNDEDVFDDTGSVRSSNGSSPALDTLSSPPPSTPRGFLSGYSAGKQLNPASGSSMYHSEYDAGDDWVEFSRDQLYMPGPEDVGHKLKIEAAAYSTDTSELLMSRVVKTDVVLGRAPDPLKRQLVTTKGGGGGGP--RFRVITYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREIIDASPEVVCLQEIQADHYENHVYVAMADAGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGVAFLNRLSKDNVAQLVVLEFIQPSRSNRE-ISQVCIANTHLYSNKDFPDVKLWQTWQLLQELESFIMSRGTNLPLIICGDFNSTPDTAVYDLLSRQTVHPGHPDVNVT----------TGDDVPNVLPDAMN--ITHSFQLGSAYQTVLGEEPWTTNFTVNFKGVLDYIWYSAQNLRPLSAAPIPEEKQLTKNGEALPSTEYSSDHIMLISDMQ-IIGNGA 624          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|397615906|gb|EJK63707.1| (hypothetical protein THAOC_15625 [Thalassiosira oceanica])

HSP 1 Score: 453.751 bits (1166), Expect = 4.319e-149
Identity = 250/609 (41.05%), Postives = 344/609 (56.49%), Query Frame = 0
Query:   20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKE--------------RFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFL-IQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMG----------RTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE---LGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGG 598
            W L++R+DRPVEGC + PHAY+Y  G+K   R+                   + YRW +GP    CA   CPR  SF+P  WS ++  G   L +QC+  ++  L R  + FC  QCF  AWK    + +              R A S  D   DA    ++ G      P    Y      E +W E+     Y P+  D+GR LKLE    + D       R+ +T+ VLS  P P +R  +       +A G +FR+ATYNILAEIYATQ  YPY D W+L+W++R  N++RE+ +VA D++ LQEVQADHYE  +   + + GY+G+YK KTR++MG +GKVDGCA+ WRR KF L+E Y +EFN+ A+RQ ++   L    ++    L ++ KDNVAQ VVLE+    R  R   + VC+ANTHLYS+ + PDVKLWQ   LLQ LE   +   +N+PL++CGDFNS P SAVY+L+S Q V   HPD+ + ++       +A               + HS +L S Y  +LGEEPR+TNYT  + GVLDY+W++  + RPL+ A +P E  +   GEALPN  Y SDH+M  SD+Q V GG
Sbjct:   10 WHLSLRVDRPVEGCTLRPHAYMY--GKKLDDREANGNHAHSKICREPPPNHEFSYRWFKGPPVDPCAYDECPRRSSFSPHDWSTYSLGGTGVLSLQCI-SSQSSLYR--ATFCNPQCFVQAWKTQFTLDRGADEPQARCSTPNRRRAGSYNDLDDDAREVTIEGGSSGPSTPANTAY------EQEWTEISHGEMYVPRPEDVGRKLKLEAAAYSSDSGELLMHRVVKTDLVLSRTPEPDKRNFITKSAAPGSAGGARFRVATYNILAEIYATQQQYPYADLWSLSWDFRFQNIIREIIDVAPDIVCLQEVQADHYESHLYNAMHDAGYEGVYKQKTRQAMGLTGKVDGCALFWRRTKFHLSESYSIEFNELAQRQVTQGMGLHARSEEGANLLNKLSKDNVAQLVVLELAQATRNDRL-NNQVCIANTHLYSNKDCPDVKLWQTLHLLQELETFVMARGTNLPLMICGDFNSTPDSAVYDLLSRQTVHPGHPDVNIPEEHGPNVLPDAM-------------NITHSHMLGSVYNAVLGEEPRYTNYTSQFRGVLDYMWYTTQNLRPLSAATVPDEGVILRHGEALPNTQYSSDHIMQISDMQIVSGG 593          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1072232083|gb|OEU16815.1| (Exo_endo_phos-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 452.981 bits (1164), Expect = 4.350e-148
Identity = 264/650 (40.62%), Postives = 357/650 (54.92%), Query Frame = 0
Query:   20 WMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKER---------------FNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQ-----------MGRTRSANSGADGVPDA----STDPLQDGEEETPPP----------PP-------------------LDYLTAD--TSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGRP----RGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGG 599
            W L++R+DRPVEGC + PH Y+Y  G+K  +RD ++                 + YRW RGP    CA   C R  SF+P  WSK A  G    +QCV             FC   CF +AWK    + +             RT S +S  D +       S+D +  G     P           PP                     Y   +    E++W EV  E+ Y P   DIGR LKLE    + +       R+ +T+ VL+  P P +R L+  KN A A +G +FRI +YN+LAEIYATQ  YPYCD W L+W YR  N++RE+ + A DV+ LQEVQADHYE  I   +SE+G++G+YK KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQA++ LGL+   ++   FL R+ KDN+AQ VVLE L  P    R  R   + VC+ANTHLYS+ EFPDVKLWQ  QLLQ LE   +   +++PL++CGDFNS P SAVY+L+  Q V   HPD+ +       +  +   ++   +       + HS  L S Y ++LGEEP+ TNYT+ + GVLDYI +S    RPL+ +P+P E  L   G+ALP+  + SDH+ML SD+Q + GG 
Sbjct:   10 WHLSLRVDRPVEGCNMKPHCYMY--GKKLDERDVDKPLPSHSKKMREPPPEHEFSYRWFRGPRSEPCAYEGCTRRTSFSPHDWSKHAIGGSGCGLQCVSTQSSLF---KCTFCNSNCFVEAWKTQYTVPKDMQRPSRGTPMRKRTGSVDSMEDDLRSVGSVGSSDRINGGGGAKSPANFSEASGSSGPPGTPRGYLGGYNGGGAPGSAGPYKNGNHPQKEEEWIEVSREQFYVPGQDDIGRRLKLEAAAYSSETGELLMHRVVKTDLVLARAPDPVKRSLVTAKNGAGAGSGARFRIVSYNVLAEIYATQQQYPYCDIWALSWEYRFHNIMREIVDAAPDVICLQEVQADHYEDHIYAAMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGLNPRSEEGTNFLNRLSKDNIAQLVVLE-LASPQLATRTNRDPINQVCIANTHLYSNKEFPDVKLWQAWQLLQELENFAMSRGTSLPLMICGDFNSSPDSAVYDLLMRQNVHPGHPDVNI------NTGDDCPNVLPDAM------NITHSFQLGSTYQSVLGEEPQQTNYTLNFKGVLDYICYSVQTLRPLSASPVPDESVLTRHGDALPSTEFSSDHIMLISDMQILNGGA 641          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|298713364|emb|CBJ33581.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 433.721 bits (1114), Expect = 6.912e-142
Identity = 229/466 (49.14%), Postives = 298/466 (63.95%), Query Frame = 0
Query:   22 LNVRLDRPVEGCLISPHAYLYQK-----GEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSA-NSGADGVPDAS----------------------TDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASEL-GLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGR--HGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVL 456
            L++RLDRP+EGC + P  Y+Y K     G   +        ++Y W RGPER VCAN +CPRA SF+P++WSK+A +G    IQCV C KLR+PRH SVFC + CF++AW++H++ H+  R + A  +G +  P AS                       D L+  EEE  P   ++    D  E++W ++ ++  Y P+  D+G CL+LE R + P G     PR+  TEPVLS PP PP+R L+ VK + +     +FR+ +YN+LAEIYATQ  YPYCD W L+W YRK NLLRE+ E  ADVL LQEVQ+D Y+Q   P LSE+GYDGLYK KTRE  GA GKVDGCAI WRR KFRL+E Y + FN+CARR  + + GL  ++ H FL RV KDNVAQ  VLEVL RPRG +     + +C+ANTHLYS+PE PDVKLWQC+ LLQ LEG      +PL++
Sbjct:   57 LSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQYTWSRGPERQVCANASCPRANSFSPLEWSKWALQGTR--IQCVPCHKLRVPRHRSVFCNVTCFKEAWQSHRQHHEHVRRQQALATGKEQPPAASEFSLSPKKAVVVAGAGGEGEGGEDLLKPEEEEDVP---INAQVMD-EEEEWTKISADSLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGVGSGGGV-RFRLCSYNLLAEIYATQQAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEGHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPAAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLV 513          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|224011515|ref|XP_002295532.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209583563|gb|ACI64249.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 416.772 bits (1070), Expect = 9.944e-135
Identity = 231/573 (40.31%), Postives = 327/573 (57.07%), Query Frame = 0
Query:   58 YRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIH-QMGRTRSAN-------SGADGVPDASTDPLQDGEEETPPPPPLDYLT----ADT-------------SEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASE-LGLS--HDQKHTFLTRVLKDNVAQAVVLEVLGR--PRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLP--SNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGG 598
            + YRW RGP    CA   CPR  SF+P  WSK A  G    +QCV     +   + + FC   CF  AWK    +   + + RS+        S AD     S + +  G  +  PP     +T    A+T               ++W E+  ++ Y P  +D+GR LKLE      D       R+ +T+ VLS      +R  +  K   +   G +FRI TYNILAEIYATQ  YP+ D W+L+W++R  N++RE+ +V  D++ LQEVQADHYE  +   + + G++G++K KTR+SMG +GKVDGCA+ WRR KF L E Y +EFN+ A+RQ ++ +GL+   ++    L+++ KDNVAQ VVLE+  +   R  R   + VC+ANTHLYS+ ++PDVKLWQ   LLQ LE   +   +N+PL++CGDFNS P +AVY+L+S Q V   HPD+ L              ++  ++       + HS +L S Y T+LGEEP+FTNYT+ + GVLDY+W+S  + RPL+ APIP E  L   G+ALP+  Y SDH+M  SD+Q V  G
Sbjct:   33 FSYRWFRGPTVEPCAYEGCPRRTSFSPHDWSKHALGGSGCSLQCV---STQSSLYKATFCNANCFVKAWKTQYTVQSDVPQARSSTPQRRRLGSYADDDDTRSVNSVNSGRSDYNPPGTPREITVGGNANTPRGNNGGYNDHHGQSEEWIEISRDQLYVPNENDVGRKLKLEAAAYAIDSGELLMHRVVKTDLVLSRTSELDKRNFITSK--PSGGGGARFRIVTYNILAEIYATQQQYPHADLWSLSWDFRFQNIIREIVDVGPDIVCLQEVQADHYESHLYNAMHDAGFEGVFKQKTRQSMGMTGKVDGCALFWRRTKFHLIESYSIEFNELAQRQVTQVMGLNPRSEEGAAILSKLSKDNVAQLVVLELAQQSISRSSREPINQVCIANTHLYSNKDYPDVKLWQTLHLLQELETFIMARGTNLPLMICGDFNSTPDTAVYDLLSRQAVHPGHPDVNL-------GDDNGPNVLPDIM------NITHSHMLGSVYNTVLGEEPKFTNYTMQFKGVLDYMWYSTQNLRPLSAAPIPDESVLTRYGDALPSTQYSSDHIMQISDMQIVSVG 587          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|676390671|ref|XP_009038613.1| (hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens] >gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens])

HSP 1 Score: 394.815 bits (1013), Expect = 1.242e-126
Identity = 233/584 (39.90%), Postives = 315/584 (53.94%), Query Frame = 0
Query:   22 LNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPR---AQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSAN--SGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERT-YCPQLSDIGRCLKLEIRVLNPDG--SLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPS--NMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFV 595
            + +R  RPVEGC + P   L   G       ++    R+RWLR   R V AN ACP    A  ++P+  +   R+G +  +QC +C K +       FC+  CF +AW  H+R H   R+R+    S A G   +  D  +  +E         +L+ D S   W+ V      + P  S++GR L++E   + P G         +  T+ VL AP  P  R  +     +        R+A+YNILAEIYAT   YPYC+ W L W YR   +++E+ +  ADV+ LQE Q DH+E+D+ P +   GY+GL+  K+RE+MGA+GKVDGCA+ W+  K+R+AE+  + FND A  +A    LS   +H +LTR++KDNVAQ VVLE    P    H    + MANTHLYSH +FPD KLWQ   LL+ LE     S   +PLVL GD NS P S+VYEL+S Q +   HPD+     Q  A           V +     Q++H L L SAYAT+ G EP FTNYT+G+ G LDYIWF     R   VA IP    L   G+ALPN  YPSDH ML +D  F+
Sbjct:   10 VKIRAGRPVEGCALRPQGVLRSSGPH-----EDGVELRWRWLRS--RDVVANCACPSCDFAHDYDPVNRN---RRGVA--LQCAICLKEQRAPETLTFCSAVCFVEAWPEHRRCHNHARSRAGTMESAASGDKGSFGDLARKDDEP-------HWLSDDASL--WEIVAENVAEFVPSESEVGRRLRIECYAVRPTGREEQLRARGVAHTDAVLGAPMAPLPRSFI---GESTEGVDPSLRVASYNILAEIYATAHAYPYCERWALEWQYRARVVIQELIDTNADVICLQEAQRDHFERDVEPAMKSAGYEGLFTQKSREAMGAAGKVDGCAMFWKTTKYRVAEQRNVSFNDLAYAEAQNANLSERDEHAYLTRLVKDNVAQLVVLEDYPAP---GHRSRRLAMANTHLYSHKDFPDTKLWQSLCLLRALESFANRSRETLPLVLAGDLNSGPDSSVYELISTQAINPRHPDLAPRVGQFGA-----------VNVLPDARQISHRLPLGSAYATVAGAEPEFTNYTMGFRGTLDYIWFDQTMLRCAAVATIPTVDALTRAGDALPNPQYPSDHTMLIADFLFL 555          
BLAST of EWM29636.1 vs. NCBI_GenBank
Match: gi|1173929721|gb|OQR82903.1| (carbon catabolite repressor protein [Achlya hypogyna])

HSP 1 Score: 400.593 bits (1028), Expect = 1.051e-119
Identity = 220/601 (36.61%), Postives = 327/601 (54.41%), Query Frame = 0
Query:   13 GTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIHQMGRTRSANSGADGVPDASTDPLQDGEEETPPPPPLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAPPPPPQRPLMQ-VKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASEL---------GLSHDQKHTFLT-------RVLKDNVAQAVVLEVLGRPRGGRHGGSM---VCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPI-PAEQDLACTGEALPNALYPSDHLMLFSDL 592
            G+   G   +++R+D+PVEGC ++ HA+ Y+  E     D + F+ ++ W +      CAN  CPR  +         A+      I+C VC+++ +    S FCT +CF+  W NH+++H        N       D S       +E+      L+       ++ W  + + +TY P  +D+G  L++E   +   G     P+ TET  VL  PP  P+RP++  +K+ A       FR+ +YN+LAEIYAT+ MYPYC  W LNW++RK  L RE++   AD+L LQEVQADHY+   LP +++ GYDGLY  KTRESMG  GKVDGCA+ +R+ +F L E+Y +EFN+ A    + L           SH ++  +         R+++DNVAQ VVL+VL  P  G     +   +C+ N H++S+PEFPDVKLWQ + LLQ +E +     +P+++CGDFNSEP SAVYEL+S   VG+DHP+++ L      +                  + AH++   SAYA++ G EP +TNYT  +VGV+DYIWF+     P+    + P E   A     LPN  + SDH+ +  D 
Sbjct:   15 GSPTSGEGRISLRVDQPVEGCEVTTHAF-YRSSEGDI--DDDDFHLKFFWYKSSTTRACANKQCPRVGTGEGNIVMLMAK------IECAVCSRMGIANESSGFCTPECFRSGWGNHRQLHDHAAKHPNNQKNRNATDVSA-----AKEKAHSLDLLNAAMVPVKDESWIALQASKTYIPTSADVGHVLRVECTAMLRSGEECGPPKFTETNIVLPFPPLAPKRPMISSIKDTARVRYIGSFRVLSYNVLAEIYATRQMYPYCPMWALNWSFRKQLLKRELQLYNADILCLQEVQADHYKSFFLPMMTDLGYDGLYLQKTRESMGLVGKVDGCAMFYRKNRFYLKEQYSLEFNEAANDFVASLLASFDMAYPAASHHERDAYQASLARVRQRLVRDNVAQIVVLDVLPEPASGLARKPVLPSICVTNVHIFSNPEFPDVKLWQTNTLLQQMEQIANSRRLPIIVCGDFNSEPPSAVYELLSQNHVGSDHPELKTLADVVPMT------------------KFAHAMPFASAYASVFGTEPDYTNYTGSWVGVVDYIWFTSDKLTPVAALQVHPPEVLKAYARTCLPNCQFVSDHVPVVVDF 583          
The following BLAST results are available for this feature:
BLAST of EWM29636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112208|gb|EWM29636.1|0.000e+0100.00Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
gi|1210524983|dbj|GAX16175.1|6.948e-15740.53CCR4-NOT transcription complex subunit 6 [Fistulif... [more]
gi|1210531048|dbj|GAX10149.1|3.022e-15640.38CCR4-NOT transcription complex subunit 6 [Fistulif... [more]
gi|219109505|ref|XP_002176507.1|4.379e-15441.63predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397615906|gb|EJK63707.1|4.319e-14941.05hypothetical protein THAOC_15625 [Thalassiosira oc... [more]
gi|1072232083|gb|OEU16815.1|4.350e-14840.62Exo_endo_phos-domain-containing protein [Fragilari... [more]
gi|298713364|emb|CBJ33581.1|6.912e-14249.14conserved unknown protein [Ectocarpus siliculosus][more]
gi|224011515|ref|XP_002295532.1|9.944e-13540.31predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|676390671|ref|XP_009038613.1|1.242e-12639.90hypothetical protein AURANDRAFT_71920 [Aureococcus... [more]
gi|1173929721|gb|OQR82903.1|1.051e-11936.61carbon catabolite repressor protein [Achlya hypogy... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1048rna1048Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications