EWM29645.1, cds1045 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|585112217|gb|EWM29645.1| (nadh-ubiquinone oxidoreductase b18 subunit family protein [Nannochloropsis gaditana]) HSP 1 Score: 152.14 bits (383), Expect = 7.298e-47 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR
Sbjct: 1 MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|693501855|emb|CEF96859.1| (NADH:ubiquinone oxidoreductase, B18 subunit [Ostreococcus tauri]) HSP 1 Score: 97.4413 bits (241), Expect = 3.590e-25 Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 0
Query: 2 TVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLL 69
T SE+ T+EEM +A++D+ RD CAHLLIPLN+CRR +FFLPWKCE ERH YE CQY EY KR +
Sbjct: 3 TASEMIATREEMREAKLDIGYRDFCAHLLIPLNECRRKSFFLPWKCEHERHVYEKCQYKEYMKRVAAM 70
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|612386815|ref|XP_007508929.1| (predicted protein [Bathycoccus prasinos] >gi|412992302|emb|CCO20015.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 96.6709 bits (239), Expect = 8.052e-25 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0
Query: 4 SELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAE 61
S +K TKEEM KA IDLA RD CAHLLIPLN+CRR +FFLPWKC+DERH YE CQY E
Sbjct: 9 STMKATKEEMKKAGIDLAYRDFCAHLLIPLNECRRKSFFLPWKCKDERHVYEKCQYEE 66
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|576041466|ref|XP_006694606.1| (hypothetical protein CTHT_0042030 [Chaetomium thermophilum var. thermophilum DSM 1495] >gi|340939099|gb|EGS19721.1| hypothetical protein CTHT_0042030 [Chaetomium thermophilum var. thermophilum DSM 1495]) HSP 1 Score: 96.6709 bits (239), Expect = 1.157e-24 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 0
Query: 7 KTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+ T+EEM A++ LA RD+CAHLLIPLN+CR T++LPWKCEDERH YE CQY E++KR Q + E R
Sbjct: 11 RATREEMRDAKVPLAYRDSCAHLLIPLNRCRYETYYLPWKCEDERHSYEKCQYLEFKKRVQKMEELR 77
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|1111892283|gb|OJJ60557.1| (hypothetical protein ASPSYDRAFT_56103 [Aspergillus sydowii CBS 593.65]) HSP 1 Score: 95.9005 bits (237), Expect = 2.420e-24 Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 1 MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+ +++ + T+EEM A++ L RD+CAHLLIPLN+CR+ ++LPWKCEDERHGYE CQY E++KR + E R
Sbjct: 11 VGLTDTQATREEMSAARLPLQYRDSCAHLLIPLNRCRQQEYYLPWKCEDERHGYEKCQYEEFKKRVAKMDELR 83
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|1111713216|gb|OJI99883.1| (hypothetical protein ASPVEDRAFT_81473 [Aspergillus versicolor CBS 583.65]) HSP 1 Score: 95.5153 bits (236), Expect = 2.821e-24 Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 1 MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+ +++ + T+EEM A++ L RD+CAHLLIPLN+CR+ ++LPWKCEDERHGYE CQY E++KR + E R
Sbjct: 11 VGLADTQATREEMSAARLPLQYRDSCAHLLIPLNRCRQQEYYLPWKCEDERHGYEKCQYEEFKKRVAKMDELR 83
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|399167136|emb|CCE32110.1| (uncharacterized protein CPUR_05968 [Claviceps purpurea 20.1]) HSP 1 Score: 95.1301 bits (235), Expect = 4.507e-24 Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 0
Query: 8 TTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
T+EEM +A++ LA RD+CAHLLIPLNKCR+ +++LPWKCEDERH YE CQY E++KR + E R
Sbjct: 12 ATREEMREARLPLAYRDSCAHLLIPLNKCRKSSWYLPWKCEDERHSYEKCQYVEFKKRVAKMDELR 77
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|367039267|ref|XP_003650014.1| (hypothetical protein THITE_2169523 [Thielavia terrestris NRRL 8126] >gi|346997275|gb|AEO63678.1| hypothetical protein THITE_2169523 [Thielavia terrestris NRRL 8126]) HSP 1 Score: 94.7449 bits (234), Expect = 6.688e-24 Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 0
Query: 7 KTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+ T+EEM A++ LA RD+CAHLLIPLN+CR T++LPWKCEDERH YE CQY E++KR + E R
Sbjct: 11 RATREEMRDAKVPLAYRDSCAHLLIPLNRCRFETYYLPWKCEDERHSYEKCQYVEFKKRVAKMNELR 77
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|902274296|emb|CRL22387.1| (NADH:ubiquinone oxidoreductase, B18 subunit [Penicillium camemberti] >gi|1168058614|gb|OQD61245.1| hypothetical protein PENPOL_c018G08718 [Penicillium polonicum]) HSP 1 Score: 94.7449 bits (234), Expect = 7.482e-24 Identity = 39/73 (53.42%), Postives = 55/73 (75.34%), Query Frame = 0
Query: 1 MTVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+ +SE T++EM +A++ + RD+CAHLLIPLN+CR+ ++LPWKCEDERH YE CQY E++KR + E R
Sbjct: 11 VGLSETSATRQEMSEARVPMQYRDSCAHLLIPLNRCRQAEYYLPWKCEDERHSYEKCQYEEFKKRVAKMDELR 83
BLAST of EWM29645.1 vs. NCBI_GenBank
Match: gi|1021536932|gb|KZN84334.1| (NADH dehydrogenase 1 beta subcomplex subunit [Penicillium chrysogenum]) HSP 1 Score: 94.3597 bits (233), Expect = 1.014e-23 Identity = 38/72 (52.78%), Postives = 56/72 (77.78%), Query Frame = 0
Query: 2 TVSELKTTKEEMDKAQIDLALRDACAHLLIPLNKCRRMTFFLPWKCEDERHGYEACQYAEYRKRAQLLAEKR 73
+V+++ T++EM +A++ + RD+CAHLLIPLN+CR+ ++LPWKCEDERH YE CQY E++KR + E R
Sbjct: 17 SVNQIPATRQEMSEARLPMQYRDSCAHLLIPLNRCRQAEYYLPWKCEDERHSYEKCQYEEFKKRVAKMDELR 88 The following BLAST results are available for this feature:
BLAST of EWM29645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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