EWM29647.1, cds1044 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|585112219|gb|EWM29647.1| (hypothetical protein Naga_100050g14 [Nannochloropsis gaditana]) HSP 1 Score: 962.214 bits (2486), Expect = 0.000e+0 Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query: 1 MTHPARSSISLLSLVLLLSNTRAFFHCPVALRPALTRLSFFGGSRQPHGQERGPPSAPALPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKTETRGTTPQSTHGGSGGVKASPSSHPVDAWGEASRTLGRLREGLTEVGSTLQTFSKQHGLMQTLLIALLSSSAEVQRVLSSCSSRAAGLPRRRRGSCEFRTSVELAQAAKATVVLGDQDLVVTLGRFKQGIWPGGGPRLEEVRAGQGGREERPSNMGRRAMMELTSFRDALLGPADLPRTCRVDVLRLLFTEERYLREVATVLVPVGLVVLGALRAMEAAGDTVLASAAQILPSSLTSLGELAPSIPLFSAGVGVGAGVGLEGVLGADVLANIGWAALNASMLCYFVAINRYILVERDAFLADSIARAAATKETKGRVVAAVVGLLHGNGIARHLRERHGFVLRDRP 484
MTHPARSSISLLSLVLLLSNTRAFFHCPVALRPALTRLSFFGGSRQPHGQERGPPSAPALPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKTETRGTTPQSTHGGSGGVKASPSSHPVDAWGEASRTLGRLREGLTEVGSTLQTFSKQHGLMQTLLIALLSSSAEVQRVLSSCSSRAAGLPRRRRGSCEFRTSVELAQAAKATVVLGDQDLVVTLGRFKQGIWPGGGPRLEEVRAGQGGREERPSNMGRRAMMELTSFRDALLGPADLPRTCRVDVLRLLFTEERYLREVATVLVPVGLVVLGALRAMEAAGDTVLASAAQILPSSLTSLGELAPSIPLFSAGVGVGAGVGLEGVLGADVLANIGWAALNASMLCYFVAINRYILVERDAFLADSIARAAATKETKGRVVAAVVGLLHGNGIARHLRERHGFVLRDRP
Sbjct: 1 MTHPARSSISLLSLVLLLSNTRAFFHCPVALRPALTRLSFFGGSRQPHGQERGPPSAPALPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKTETRGTTPQSTHGGSGGVKASPSSHPVDAWGEASRTLGRLREGLTEVGSTLQTFSKQHGLMQTLLIALLSSSAEVQRVLSSCSSRAAGLPRRRRGSCEFRTSVELAQAAKATVVLGDQDLVVTLGRFKQGIWPGGGPRLEEVRAGQGGREERPSNMGRRAMMELTSFRDALLGPADLPRTCRVDVLRLLFTEERYLREVATVLVPVGLVVLGALRAMEAAGDTVLASAAQILPSSLTSLGELAPSIPLFSAGVGVGAGVGLEGVLGADVLANIGWAALNASMLCYFVAINRYILVERDAFLADSIARAAATKETKGRVVAAVVGLLHGNGIARHLRERHGFVLRDRP 484
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|298705470|emb|CBJ28745.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.0922 bits (170), Expect = 3.067e-9 Identity = 44/113 (38.94%), Postives = 59/113 (52.21%), Query Frame = 0
Query: 27 CPVALRPALTRLSFFG--GSRQPHGQERGPP--SAPALPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAE---EAKYLAALQAAER 132
C + RP SF G+ +G PP S +P T+LVL +TG +Y+VGC+HGS AS DV V P AVVLELC +R + ++ + AK A L+ ER
Sbjct: 65 CSLRARPGWCTRSFSSRLGASAGNGNASSPPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGSHASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKRAKGDAPLEGKER 177
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|242015641|ref|XP_002428459.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212513076|gb|EEB15721.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 68.5514 bits (166), Expect = 5.329e-9 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 60 LPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKT 138
LP TT+VLE GS+VY+VG H SE S+EDV+ V R P +VVLELC +R +Q +E K L + E + V +T
Sbjct: 96 LPDTTIVLE-TDWGSKVYLVGTAHFSEQSQEDVAKVIRAVQPNSVVLELCESRSYMLQWKEEKILKIAEKMEFKMVKET 173
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|1174752013|gb|OQV20064.1| (Acid phosphatase type 7 [Hypsibius dujardini]) HSP 1 Score: 67.781 bits (164), Expect = 2.533e-8 Identity = 32/62 (51.61%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 51 ERGPPSAPALPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPAR 112
E+ P P LP T VL+HP++G +VYIVG H S+EDV+T R P VVLELCP R
Sbjct: 61 EKFRPLNPELPETVTVLDHPTSGGRVYIVGTAHFGSKSQEDVATTIRQLMPDYVVLELCPER 122
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|546683378|gb|ERL93200.1| (hypothetical protein D910_10497 [Dendroctonus ponderosae]) HSP 1 Score: 63.1586 bits (152), Expect = 3.746e-7 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0
Query: 60 LPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKT 138
LP T +L HP TG+ VY+VG H S+ S+EDV V R P +++ELCP+R + +E L + + + T
Sbjct: 51 LPDTVTLLTHPETGANVYLVGTAHFSKESQEDVKKVIRHVQPQVIIVELCPSRTSMLALDEKTVLEEAKTIDMARIIST 129
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|1130228531|ref|XP_019759677.1| (PREDICTED: traB domain-containing protein [Dendroctonus ponderosae] >gi|478257083|gb|ENN77246.1| hypothetical protein YQE_06076, partial [Dendroctonus ponderosae]) HSP 1 Score: 63.1586 bits (152), Expect = 4.060e-7 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0
Query: 60 LPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKT 138
LP T +L HP TG+ VY+VG H S+ S+EDV V R P +++ELCP+R + +E L + + + T
Sbjct: 51 LPDTVTLLTHPETGANVYLVGTAHFSKESQEDVKKVIRHVQPQVIIVELCPSRTSMLALDEKTVLEEAKTIDMARIIST 129
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|1133430500|ref|XP_019871227.1| (PREDICTED: LOW QUALITY PROTEIN: traB domain-containing protein-like [Aethina tumida] >gi|1133446532|ref|XP_019879854.1| PREDICTED: traB domain-containing protein-like [Aethina tumida]) HSP 1 Score: 63.1586 bits (152), Expect = 4.192e-7 Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 60 LPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKT 138
LP T +L HP++G++VY+VG H S+ S+EDVS V + P V+LELC +R + +EA L + + + +T
Sbjct: 54 LPPTVTLLTHPTSGAKVYLVGTAHFSKESQEDVSLVIQTVKPNVVILELCKSRTNILSLDEATVLEEAKNIDSAKILRT 132
BLAST of EWM29647.1 vs. NCBI_GenBank
Match: gi|1069822164|ref|XP_018333937.1| (PREDICTED: traB domain-containing protein [Agrilus planipennis]) HSP 1 Score: 62.003 bits (149), Expect = 8.194e-7 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 60 LPGTTLVLEHPSTGSQVYIVGCVHGSEASEEDVSTVFRLHSPAAVVLELCPARFEGMQAEEAKYLAALQAAERRHVAKT 138
LP T +L+HPSTG +VY+VG H S+ S+EDV V R P V+LELC AR + +E L + + + + T
Sbjct: 58 LPETVTLLKHPSTGVKVYLVGTAHFSKESQEDVIKVIRNVQPHIVMLELCKARTSILSFDEETILEESKNIDMQRILST 136 The following BLAST results are available for this feature:
BLAST of EWM29647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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